Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g12390.t01
CDS Infomation

cds chromosome:12X:18:10590637:10594951:-1 gene:VIT_18s0001g12390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACGACGTTTCGTTGTGCTTCGGTGGCCTTTCTTTTCTCCCTCCTACACTCTGTTCTT
CTAGCAAGATCGGAGTCGTTCATTGGTATAAACTATGGCCAAGTCGCCGATAACCTCCCC
CCTCCATCAGCAACCGCAAAGCTTCTACAATCCACTTCCATTGAAAAAGTCAGGCTGTAC
GGAGCCGACCCAGCTATCATCAAAGCCCTTGCCAATACCGGCATCGGAATCGTCATCGGA
ACAGCGAACGGCGATGTCCCGGCACTAGCTTCCGATCCCAACTTCGCCAGGAATTGGATC
AATTCCAATGTCCTTCCCTACTATCCCTCTAGCAAAATCATCCTCATCACTGTCGGAAAC
GAAGTCATGACCTCCGGCGACCAGAATCTGATGACGCAGCTCTTGCCGGCGATGCAGAAT
CTCCAAAATGCCCTCAACGGCGCATCACTTGGCGGCATGATTAAGGTATCCACCGTCCAC
TCCATGGCAGTGCTGAAGCAATCTGAACCGCCTTCTTCTGGAAGTTTCGATCCGAGCTTC
GGGGACCTGATGAAAGGACTGTTAGGGTTTAACAAAGCCACTGGTTCGCCATTCGCGATC
AATCCATACCCTTACTTCGCATACCGGAGCGACCACAGACCTGAAACGCTGGCTTTTTGT
CTTTTTCAACCCAACTCCGGACGTTTCGACTCTGGGACTAATATCAAGTACATGAATATG
TTCGATGCCCAGGTGGACGCTGTTCGAGCTGCATTGAACTCGATGGGCTTCAAGGAAATT
GAGATAGTGGTTGCGGAGACGGGCTGGCCCTACAAAGGAGACAGCAACGAGGTAGGCCCA
AGTATTGAAAATGCCAAGGCTTACAATGGGAACCTGATCTCGCACCTGAGGTCACTGGTG
GGAACGCCCTTGATGCCTGGGAAATCAGTGGATACATATCTGTTTGCACTCTACGACGAG
GACCTGAAACCTGGGCCGGGCTCAGAGCGCGCATTTGGGCTTTTTAAGACTGATCTCACC
ATGACCTATGATGTTGGCCTCTCCAAGGGCGCCCAGAACACTACTCCGGCACCGGCAACC
CCCAAAACTCCGGCCACTCCATCTCCATCTCCATCGACGAACGGAACGTGGTGTGTGCCC
AAATCAGTTGTATCAAATGCCCAACTCCAGGCTAATCTGGACTACGCCTGCGGACAAGGG
ATAGATTGCCGTCCAGTCCAACCAGGTGGGGCTTGTTTTGAACCCAACACCGTAGCATCA
CATGCTGCTTATGCAATGAACCTCTTCTACCAAAATTCTGCTCGCAATCCATGGAACTGT
GATTTCTCACAAACAGCCACACTCACATCTAAAAATCCCAGCTATAAGGGTTGTATTTAC
CCTGGTGGACGTACCTGA

Peptide Sequence

PEP ID

VIT_18s0001g12390.t01
PEP Infomation

pep chromosome:12X:18:10590637:10594951:-1 gene:VIT_18s0001g12390 transcript:VIT_18s0001g12390.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTTFRCASVAFLFSLLHSVLLARSESFIGINYGQVADNLPPPSATAKLLQSTSIEKVRLY
GADPAIIKALANTGIGIVIGTANGDVPALASDPNFARNWINSNVLPYYPSSKIILITVGN
EVMTSGDQNLMTQLLPAMQNLQNALNGASLGGMIKVSTVHSMAVLKQSEPPSSGSFDPSF
GDLMKGLLGFNKATGSPFAINPYPYFAYRSDHRPETLAFCLFQPNSGRFDSGTNIKYMNM
FDAQVDAVRAALNSMGFKEIEIVVAETGWPYKGDSNEVGPSIENAKAYNGNLISHLRSLV
GTPLMPGKSVDTYLFALYDEDLKPGPGSERAFGLFKTDLTMTYDVGLSKGAQNTTPAPAT
PKTPATPSPSPSTNGTWCVPKSVVSNAQLQANLDYACGQGIDCRPVQPGGACFEPNTVAS
HAAYAMNLFYQNSARNPWNCDFSQTATLTSKNPSYKGCIYPGGRT

Transcript Sequence

Transcript ID

VIT_18s0001g12390.t01
Transcript Infomation

cdna chromosome:12X:18:10590637:10594951:-1 gene:VIT_18s0001g12390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAAAACGATAAGCTCTCCAGCCATGACGACGTTTCGTTGTGCTTCGGTGGCCTTTCTTTT
CTCCCTCCTACACTCTGTTCTTCTAGCAAGATCGGAGTCGTTCATTGGTATAAACTATGG
CCAAGTCGCCGATAACCTCCCCCCTCCATCAGCAACCGCAAAGCTTCTACAATCCACTTC
CATTGAAAAAGTCAGGCTGTACGGAGCCGACCCAGCTATCATCAAAGCCCTTGCCAATAC
CGGCATCGGAATCGTCATCGGAACAGCGAACGGCGATGTCCCGGCACTAGCTTCCGATCC
CAACTTCGCCAGGAATTGGATCAATTCCAATGTCCTTCCCTACTATCCCTCTAGCAAAAT
CATCCTCATCACTGTCGGAAACGAAGTCATGACCTCCGGCGACCAGAATCTGATGACGCA
GCTCTTGCCGGCGATGCAGAATCTCCAAAATGCCCTCAACGGCGCATCACTTGGCGGCAT
GATTAAGGTATCCACCGTCCACTCCATGGCAGTGCTGAAGCAATCTGAACCGCCTTCTTC
TGGAAGTTTCGATCCGAGCTTCGGGGACCTGATGAAAGGACTGTTAGGGTTTAACAAAGC
CACTGGTTCGCCATTCGCGATCAATCCATACCCTTACTTCGCATACCGGAGCGACCACAG
ACCTGAAACGCTGGCTTTTTGTCTTTTTCAACCCAACTCCGGACGTTTCGACTCTGGGAC
TAATATCAAGTACATGAATATGTTCGATGCCCAGGTGGACGCTGTTCGAGCTGCATTGAA
CTCGATGGGCTTCAAGGAAATTGAGATAGTGGTTGCGGAGACGGGCTGGCCCTACAAAGG
AGACAGCAACGAGGTAGGCCCAAGTATTGAAAATGCCAAGGCTTACAATGGGAACCTGAT
CTCGCACCTGAGGTCACTGGTGGGAACGCCCTTGATGCCTGGGAAATCAGTGGATACATA
TCTGTTTGCACTCTACGACGAGGACCTGAAACCTGGGCCGGGCTCAGAGCGCGCATTTGG
GCTTTTTAAGACTGATCTCACCATGACCTATGATGTTGGCCTCTCCAAGGGCGCCCAGAA
CACTACTCCGGCACCGGCAACCCCCAAAACTCCGGCCACTCCATCTCCATCTCCATCGAC
GAACGGAACGTGGTGTGTGCCCAAATCAGTTGTATCAAATGCCCAACTCCAGGCTAATCT
GGACTACGCCTGCGGACAAGGGATAGATTGCCGTCCAGTCCAACCAGGTGGGGCTTGTTT
TGAACCCAACACCGTAGCATCACATGCTGCTTATGCAATGAACCTCTTCTACCAAAATTC
TGCTCGCAATCCATGGAACTGTGATTTCTCACAAACAGCCACACTCACATCTAAAAATCC
CAGCTATAAGGGTTGTATTTACCCTGGTGGACGTACCTGAAGAGTAGAGATGTTGCATTT
GGTAAGAATAAATGAGTGACGGAGGTGGGTTGCGTGCGGCTTAATGGAGGAGTGGAATCT
CTACTCTTCGTTTTCCCCGCTTCCTTCTTCTGTGTCTTTCAAGTGTAAAGAAATGAGGGT
GCTCCAGGGCTCGTCATGCTTGTGAACTGGGAAACATAAATTACATAACAAAGATTCACT
TGCAAGATATACCGACCAATATCTGTGGAGATGATAAACATTTTCTAAAAAAAA