Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g12260.t01
CDS Infomation

cds chromosome:12X:18:10446283:10469785:-1 gene:VIT_18s0001g12260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGAGCCGATTCGAAGCGGTGGAGATATTTCAACAGAAATCGGTATTCCGACCGGG
TTGAATCGGATCAAGACTCGTCGAGAGTCTTCCAAGGATCAACTGAATTGGAAACCCGAT
GATGACGATAAGTTTCATGAGTCGCGGCCTCGTGGAATTTCAAGGCCGCCAGCGAATCAG
AAGCATAACAAAGGACATGCAAAATTCGCTGGCTCTATAGAAGGATTCCATAAAGGAAAG
AAGATTGCTCGGTGGTTCACCTCACATCTTTCCAAGGATTCCAGTCAAGGTTTTGATGAT
GTTCCTCCAAAAGTTCAGGACAGTAACTCTAAAGTCAAGGCACCCGACAAGGAAGGTTCT
ACAAGAACTAAACAATGGAAGGAGGGGAAGCATTTGACTGGAAAACAATCTTCACCAGAG
GGCTTAAGCAGTATTAAAGTGCCAAAAGGTTTAAAAAGTTTTTCACATGAGTTAGGACCA
AAGGGTGGCATTCCACCTTCCCATCCTCGGGCGCATAGCTACAATGATTTGAAGGAGCTT
CTGGGATCATTGCATTCAAGATTTGATGCTGCTAAAGAAGTGGTGAATGTGGAGCTGTCT
AGTCTTACTGGGGATATCATGGATGCACTTCAGAGGAATGACTCATCCCCAGGACAAAAG
ATGGCAGAAGGTCTTCTGATTCTTGCTCAGCAATGTATGGAAATGACTCCATCTGAGTTT
CGCATCAAATGTGAAACAATTGTCCAAGGTCTGACGGAGAAAAGGCAACATTGTCAAACG
GCATTTCTGAAGTGGCTCTTCACACGCATGCTTTTTATATTGACACGCTGTACTAGACTG
TTGCGGTTTCAGAAAGACAGTGAGCCGATTGATGAGAAATCTCTTCATAACTTCACAAAG
TGTTTGGAGAGCATTCCTGCTGTTGAAATGAACTGGGCGCCCTATTCCAGAATTGTTGAT
TCTGGCTCAGATTATGATAGTAATGGGAAGAGTGATGCCAAACATGAATTACAGTGGCGA
AACAGGGTATCTTCTCTCCTTGAGCAAACTTGGTGCAGGTCTGAAGAGCCAGCTGACAAG
AGTGGTATAACTTCTAGAAAAGATAGCATGGTTTTGGTACAAAAGCCACTGTCTCAAAAT
TCTCAAATTGATTTCCTTCCACATATTGAACAAGATGGTGATTACCCTGGGAAGTCAATG
AACAGTTTTGAGGATGGCTCTCTTCATGAGCCAGAACGGGGTTTAGATGGATCTGATTCG
GTAATTTGTCGGATATGTGAGGAAAATGTTCCTACTTCTCATTTGGAATCTCATTCTTAT
ATATGTGCTTATGCAGATAAGTGTGATTTAAAATATCTAGATATAGATGAACGCCTTTCA
AAACTTGCTGAGATTTTGGAACAAATTATAGAGTCACGTAATCTGAATTTTCAGGCATCA
TTTTGCAGCCCTGAAAATTCAAGAATGCAAATTACAAACTCTGCTGTTATATCTGAAGGT
TGTTCTCCCAAGATAAGTGAGTGGCGAAATAAAGGTGTGGAAGGGATGTTTGAGGACCTT
CATGAGATGGACACTGCCTGCATAGATGATTCCTACCTTACAAACCCCCTTAACTTGAAG
GGCCACTGGGGTACAAAGCTTAGCCAGTATGGTGCACCCTCCTCAACTGGAAGCATGACA
TCAATGTCCTCCACAAATACCCCGAGAGCAGGTCATTTTGACTTATTCTGGCTAGAGCAC
AACAATCCTTCTAAGCTGGAGGATGTGCAACAGATGGCTGACCTTGCAGACATTGCCCGC
TGTGTGGCAGGCACAGATCTATCTAAAGAAGGATCCTGTGACTTTTTGCTCGCCTGTATG
GAAGACTTACAGGATGTTTTACAGAATACCAAGCTCAAATCTCTTGTAATAGACACATTT
GGAGGCCGGATAGAGAATCTTCTAAGAGAAAAGTATATTCTCGCTTGTGAATTAGCAGAT
ACAAAAAGTCCCAAGAGTGATAACAGAATTAAGGAGAGCTCTAGGCTTTTGTTTGATAAT
GCATCCCATAGTAGTACAATGTCAACTCCTCTACATCCCTTACATAAAGAACGGACAAGC
ATTGATGATTTTGAGATTATCAAACCAATTAGCAGAGGTGCCTTTGGTAAAGTGTTCCTT
GCACGAAAGCGAACAACAGGAGATTTATTTGCAATAAAGGTCCTCAAGAAATTGGATATG
ATACGGAAAAATGATATTGAACGGATATTAGCAGAGCGTAACATACTTATTACAGTTAGA
AACCCTTTTGTGGTTCGCTTTTTTTATTCATTCACCTGTAGAGATAATGTCTATTTGGTT
ATGGAATATCTTAATGGAGGTGATCTATACTCTTTGCTCAGAAAACTCGGTTGCCTTGAA
GAAGATGTAGCTCGTATATATATAGCAGAACTGGTCCTTGCTTTAGAATACCTGCATTCT
CTTGGCATAGTGCATCGTGATCTGAAACCAGACAATATATTGATTGCACATGATGGGCAC
ATAAAGCTAACAGACTTTGGATTATCAAAAATTGGCCTCATAAACAGCACAGTTGATTTA
TCGGGGCCCGAGACAGATGGAAGCACTGATGCTTTTCTAGATTCCCTTAATCTGCACACT
CAACAAACAGATGATAGACATCGACAATCAGCTGTTGGGACACCTGACTACTTGGCTCCA
GAAATCCTTCTTGGAACAGAGCATGGTTATGCTGCGGACTGGTGGTCAGTGGGAATTATC
CTATTTGAATTAATTACTGGAGTTCCACCATTCACCGCTGAGCATCCAGAGATAATCTTC
GACAACATTCTTAACAGGAAAATCCCCTGGCCTTCTGTTCCTGGTGATATGTCCTATGAG
GCTCAAGACTTGATTAACAGGTTTCTTATTCATGATCCAGATCTGCGCCTCGGAGCAAAT
GGATTGTCAGAGGTGAAAACACATCCTTTTTTCAAGGGAGTTAACTGGGACACCCTTGCA
TTACAAAAGGCCGTCTTTGTACCACAGCCTGATAGTGCAGATGATACAAGTTATTTCGTT
TCACGGTACTCTCAAATTCCTAGTGGGTTGCCAGATGAACAGGACTGTAGTGATTCTGCT
ACTGATTCTAGTGACCTATACTCAAATTCTGGACTTGAGATGGATGAATGCGGTGATCTG
GCGGAGTTTGATTCTTCCCCTCTGAACCTATCATTGATAAACTTCTCTTTCAAGAATCTG
TCGCAGTTGGCATCCATTAATTATGACGTGCTCTTGCAGACTGGGAAGGATCCAACAAAG
TGCAGTCCATCCAAATCTCGAGACACTTAA

Peptide Sequence

PEP ID

VIT_18s0001g12260.t01
PEP Infomation

pep chromosome:12X:18:10446283:10469785:-1 gene:VIT_18s0001g12260 transcript:VIT_18s0001g12260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAEPIRSGGDISTEIGIPTGLNRIKTRRESSKDQLNWKPDDDDKFHESRPRGISRPPANQ
KHNKGHAKFAGSIEGFHKGKKIARWFTSHLSKDSSQGFDDVPPKVQDSNSKVKAPDKEGS
TRTKQWKEGKHLTGKQSSPEGLSSIKVPKGLKSFSHELGPKGGIPPSHPRAHSYNDLKEL
LGSLHSRFDAAKEVVNVELSSLTGDIMDALQRNDSSPGQKMAEGLLILAQQCMEMTPSEF
RIKCETIVQGLTEKRQHCQTAFLKWLFTRMLFILTRCTRLLRFQKDSEPIDEKSLHNFTK
CLESIPAVEMNWAPYSRIVDSGSDYDSNGKSDAKHELQWRNRVSSLLEQTWCRSEEPADK
SGITSRKDSMVLVQKPLSQNSQIDFLPHIEQDGDYPGKSMNSFEDGSLHEPERGLDGSDS
VICRICEENVPTSHLESHSYICAYADKCDLKYLDIDERLSKLAEILEQIIESRNLNFQAS
FCSPENSRMQITNSAVISEGCSPKISEWRNKGVEGMFEDLHEMDTACIDDSYLTNPLNLK
GHWGTKLSQYGAPSSTGSMTSMSSTNTPRAGHFDLFWLEHNNPSKLEDVQQMADLADIAR
CVAGTDLSKEGSCDFLLACMEDLQDVLQNTKLKSLVIDTFGGRIENLLREKYILACELAD
TKSPKSDNRIKESSRLLFDNASHSSTMSTPLHPLHKERTSIDDFEIIKPISRGAFGKVFL
ARKRTTGDLFAIKVLKKLDMIRKNDIERILAERNILITVRNPFVVRFFYSFTCRDNVYLV
MEYLNGGDLYSLLRKLGCLEEDVARIYIAELVLALEYLHSLGIVHRDLKPDNILIAHDGH
IKLTDFGLSKIGLINSTVDLSGPETDGSTDAFLDSLNLHTQQTDDRHRQSAVGTPDYLAP
EILLGTEHGYAADWWSVGIILFELITGVPPFTAEHPEIIFDNILNRKIPWPSVPGDMSYE
AQDLINRFLIHDPDLRLGANGLSEVKTHPFFKGVNWDTLALQKAVFVPQPDSADDTSYFV
SRYSQIPSGLPDEQDCSDSATDSSDLYSNSGLEMDECGDLAEFDSSPLNLSLINFSFKNL
SQLASINYDVLLQTGKDPTKCSPSKSRDT

Transcript Sequence

Transcript ID

VIT_18s0001g12260.t01
Transcript Infomation

cdna chromosome:12X:18:10446283:10469785:-1 gene:VIT_18s0001g12260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAGCTCTCTGCCTCCGTGGCCGCCAACGGAACTCAGCGTATCAGTTAATTTCCGTTTTAA
ATTGGCTCCAATTATTCTTGTTAATGGCGGAGCCGATTCGAAGCGGTGGAGATATTTCAA
CAGAAATCGGTATTCCGACCGGGTTGAATCGGATCAAGACTCGTCGAGAGTCTTCCAAGG
ATCAACTGAATTGGAAACCCGATGATGACGATAAGTTTCATGAGTCGCGGCCTCGTGGAA
TTTCAAGGCCGCCAGCGAATCAGAAGCATAACAAAGGACATGCAAAATTCGCTGGCTCTA
TAGAAGGATTCCATAAAGGAAAGAAGATTGCTCGGTGGTTCACCTCACATCTTTCCAAGG
ATTCCAGTCAAGGTTTTGATGATGTTCCTCCAAAAGTTCAGGACAGTAACTCTAAAGTCA
AGGCACCCGACAAGGAAGGTTCTACAAGAACTAAACAATGGAAGGAGGGGAAGCATTTGA
CTGGAAAACAATCTTCACCAGAGGGCTTAAGCAGTATTAAAGTGCCAAAAGGTTTAAAAA
GTTTTTCACATGAGTTAGGACCAAAGGGTGGCATTCCACCTTCCCATCCTCGGGCGCATA
GCTACAATGATTTGAAGGAGCTTCTGGGATCATTGCATTCAAGATTTGATGCTGCTAAAG
AAGTGGTGAATGTGGAGCTGTCTAGTCTTACTGGGGATATCATGGATGCACTTCAGAGGA
ATGACTCATCCCCAGGACAAAAGATGGCAGAAGGTCTTCTGATTCTTGCTCAGCAATGTA
TGGAAATGACTCCATCTGAGTTTCGCATCAAATGTGAAACAATTGTCCAAGGTCTGACGG
AGAAAAGGCAACATTGTCAAACGGCATTTCTGAAGTGGCTCTTCACACGCATGCTTTTTA
TATTGACACGCTGTACTAGACTGTTGCGGTTTCAGAAAGACAGTGAGCCGATTGATGAGA
AATCTCTTCATAACTTCACAAAGTGTTTGGAGAGCATTCCTGCTGTTGAAATGAACTGGG
CGCCCTATTCCAGAATTGTTGATTCTGGCTCAGATTATGATAGTAATGGGAAGAGTGATG
CCAAACATGAATTACAGTGGCGAAACAGGGTATCTTCTCTCCTTGAGCAAACTTGGTGCA
GGTCTGAAGAGCCAGCTGACAAGAGTGGTATAACTTCTAGAAAAGATAGCATGGTTTTGG
TACAAAAGCCACTGTCTCAAAATTCTCAAATTGATTTCCTTCCACATATTGAACAAGATG
GTGATTACCCTGGGAAGTCAATGAACAGTTTTGAGGATGGCTCTCTTCATGAGCCAGAAC
GGGGTTTAGATGGATCTGATTCGGTAATTTGTCGGATATGTGAGGAAAATGTTCCTACTT
CTCATTTGGAATCTCATTCTTATATATGTGCTTATGCAGATAAGTGTGATTTAAAATATC
TAGATATAGATGAACGCCTTTCAAAACTTGCTGAGATTTTGGAACAAATTATAGAGTCAC
GTAATCTGAATTTTCAGGCATCATTTTGCAGCCCTGAAAATTCAAGAATGCAAATTACAA
ACTCTGCTGTTATATCTGAAGGTTGTTCTCCCAAGATAAGTGAGTGGCGAAATAAAGGTG
TGGAAGGGATGTTTGAGGACCTTCATGAGATGGACACTGCCTGCATAGATGATTCCTACC
TTACAAACCCCCTTAACTTGAAGGGCCACTGGGGTACAAAGCTTAGCCAGTATGGTGCAC
CCTCCTCAACTGGAAGCATGACATCAATGTCCTCCACAAATACCCCGAGAGCAGGTCATT
TTGACTTATTCTGGCTAGAGCACAACAATCCTTCTAAGCTGGAGGATGTGCAACAGATGG
CTGACCTTGCAGACATTGCCCGCTGTGTGGCAGGCACAGATCTATCTAAAGAAGGATCCT
GTGACTTTTTGCTCGCCTGTATGGAAGACTTACAGGATGTTTTACAGAATACCAAGCTCA
AATCTCTTGTAATAGACACATTTGGAGGCCGGATAGAGAATCTTCTAAGAGAAAAGTATA
TTCTCGCTTGTGAATTAGCAGATACAAAAAGTCCCAAGAGTGATAACAGAATTAAGGAGA
GCTCTAGGCTTTTGTTTGATAATGCATCCCATAGTAGTACAATGTCAACTCCTCTACATC
CCTTACATAAAGAACGGACAAGCATTGATGATTTTGAGATTATCAAACCAATTAGCAGAG
GTGCCTTTGGTAAAGTGTTCCTTGCACGAAAGCGAACAACAGGAGATTTATTTGCAATAA
AGGTCCTCAAGAAATTGGATATGATACGGAAAAATGATATTGAACGGATATTAGCAGAGC
GTAACATACTTATTACAGTTAGAAACCCTTTTGTGGTTCGCTTTTTTTATTCATTCACCT
GTAGAGATAATGTCTATTTGGTTATGGAATATCTTAATGGAGGTGATCTATACTCTTTGC
TCAGAAAACTCGGTTGCCTTGAAGAAGATGTAGCTCGTATATATATAGCAGAACTGGTCC
TTGCTTTAGAATACCTGCATTCTCTTGGCATAGTGCATCGTGATCTGAAACCAGACAATA
TATTGATTGCACATGATGGGCACATAAAGCTAACAGACTTTGGATTATCAAAAATTGGCC
TCATAAACAGCACAGTTGATTTATCGGGGCCCGAGACAGATGGAAGCACTGATGCTTTTC
TAGATTCCCTTAATCTGCACACTCAACAAACAGATGATAGACATCGACAATCAGCTGTTG
GGACACCTGACTACTTGGCTCCAGAAATCCTTCTTGGAACAGAGCATGGTTATGCTGCGG
ACTGGTGGTCAGTGGGAATTATCCTATTTGAATTAATTACTGGAGTTCCACCATTCACCG
CTGAGCATCCAGAGATAATCTTCGACAACATTCTTAACAGGAAAATCCCCTGGCCTTCTG
TTCCTGGTGATATGTCCTATGAGGCTCAAGACTTGATTAACAGGTTTCTTATTCATGATC
CAGATCTGCGCCTCGGAGCAAATGGATTGTCAGAGGTGAAAACACATCCTTTTTTCAAGG
GAGTTAACTGGGACACCCTTGCATTACAAAAGGCCGTCTTTGTACCACAGCCTGATAGTG
CAGATGATACAAGTTATTTCGTTTCACGGTACTCTCAAATTCCTAGTGGGTTGCCAGATG
AACAGGACTGTAGTGATTCTGCTACTGATTCTAGTGACCTATACTCAAATTCTGGACTTG
AGATGGATGAATGCGGTGATCTGGCGGAGTTTGATTCTTCCCCTCTGAACCTATCATTGA
TAAACTTCTCTTTCAAGAATCTGTCGCAGTTGGCATCCATTAATTATGACGTGCTCTTGC
AGACTGGGAAGGATCCAACAAAGTGCAGTCCATCCAAATCTCGAGACACTTAAGTTCCTT
GTTCTTGGTAGGGTAGAACTAATTTTTCTGTTAGTTTTATAGCGATTATACCACAGTAG