Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g12170.t01
CDS Infomation

cds chromosome:12X:18:10346378:10348852:-1 gene:VIT_18s0001g12170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCATCTCCTTGCCGTTGGATTGTTCATTCCTGTCATCTTGATACTAAAATTAATACAC
AAAATCATCTGGGTGCCATGGAGGATCCAACGCCACTTCAACAAACAAGGCGTAAGTGGC
CCCGCCTACAGTCCCATATTCGGGAACACAGCTGAGATCCACCGTATGTACGCGGAGGTG
AAGTCAAAATCCATTTCTTTTGGGCATGACATACTTCATCGTGTAGCTCCACATTACCAC
CGGTGGTCATCTGATTATGGGAAGACTTTCGTGTGGTGGTTCGGGCCAATTCCCAGGTTG
GGTATAGCGGACCCGGAGTTGATTAAGGAGGTTCTTATGAATACAAGTGGCTGCTATGGC
AAGATTGGGTTGAACCCTTTGTCTAAGCTGCTGTTTGGAGATGGACTCGTTGTGTTGGAG
GGTGAGAAGTGGGCTCTTCACAGAAGAATCAGTAACCAGGTCTTCAACATGGAGAGGGTT
AAGGGGTGGATTTCAGAAATTGTGGCTAGTGTTACAAAGATGATGGAGAAGTGGGAGGAA
GAAAGAGGAGGGAGGGAGGAGTTGGAGATTGATGCGCACAAAGAACTGCACAACCTCACA
GCAGATATCATATCAAGAACTGCTTTTGGAAGCAGCTTTGAAGAGGGGAAGCGCATTTTT
GAATTACAAGAACAGCAGATGCACCTTGTCTCCCAGGCTATAAGAAGTGTTTATATTCCC
GGCTTCAGATTTTTGCCCACTAAGAAGAACAGAGAAAGGTGGAGACTTGAGGAGGAAACT
CGAAAGTCAATTCGGATGTTAATTGAGACTAATAGCAAAGCAAAGGAAAATTCAGAAAAT
TTAATTAGTCTATTAATGTCTGCCAACAAGAATCAGCAGGGAGGAGAAGAGATGTTTGGA
GTGGAGGATGTTATAGGCGAATGCAAGACATTCTACTTTGCAGGAAAGGAAACGACTGCT
AATCTTTTGACTTGGGCTCTTCTTCTTCTAGCTTTTCATCAAGAATGGCAAGACAAAGCA
CGGGAAGAAGTGGTTCGCATCTATGGACACAATGCGCCTTCTGCAGCAGAGAATTTAAAC
GACCTTAAAATTGTAAGCATGATACTCAATGAAACACTTCGACTCTACCCCCCTGTTGTG
GCGATGACAAGGAAAGTATCCAGAAATGTCAAGCTAGGGAGTCTAGATATTCCTGCAAAC
ACCCAACTGTACTTGGCCATGACTGCTGTTCATCACGACCCTAAAATATGGGGTGAAGAT
GCTAATGATTTCAATCCACTGAGATTTAAGGAGCCTCGGAAGCATCTAGCCTCGTTTTTC
CCCTTTGGGTTGGGCCCCAGGATCTGTGTAGGTCAAACTCTTGCAGTGGTTGAGGCAAAA
ATTGCCCTCTCTATGATCATCCAACATTATTCTTTTGAGTTATCATCAACATATGTTCAT
GCCCCAATGCAGTTTATCACCCTGCAGCCTCAGTATGGTGCTCACATTCTCTTTAGAAGG
ATTTTAAGCTGA

Peptide Sequence

PEP ID

VIT_18s0001g12170.t01
PEP Infomation

pep chromosome:12X:18:10346378:10348852:-1 gene:VIT_18s0001g12170 transcript:VIT_18s0001g12170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MHLLAVGLFIPVILILKLIHKIIWVPWRIQRHFNKQGVSGPAYSPIFGNTAEIHRMYAEV
KSKSISFGHDILHRVAPHYHRWSSDYGKTFVWWFGPIPRLGIADPELIKEVLMNTSGCYG
KIGLNPLSKLLFGDGLVVLEGEKWALHRRISNQVFNMERVKGWISEIVASVTKMMEKWEE
ERGGREELEIDAHKELHNLTADIISRTAFGSSFEEGKRIFELQEQQMHLVSQAIRSVYIP
GFRFLPTKKNRERWRLEEETRKSIRMLIETNSKAKENSENLISLLMSANKNQQGGEEMFG
VEDVIGECKTFYFAGKETTANLLTWALLLLAFHQEWQDKAREEVVRIYGHNAPSAAENLN
DLKIVSMILNETLRLYPPVVAMTRKVSRNVKLGSLDIPANTQLYLAMTAVHHDPKIWGED
ANDFNPLRFKEPRKHLASFFPFGLGPRICVGQTLAVVEAKIALSMIIQHYSFELSSTYVH
APMQFITLQPQYGAHILFRRILS

Transcript Sequence

Transcript ID

VIT_18s0001g12170.t01
Transcript Infomation

cdna chromosome:12X:18:10346378:10348852:-1 gene:VIT_18s0001g12170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCATCTCCTTGCCGTTGGATTGTTCATTCCTGTCATCTTGATACTAAAATTAATACAC
AAAATCATCTGGGTGCCATGGAGGATCCAACGCCACTTCAACAAACAAGGCGTAAGTGGC
CCCGCCTACAGTCCCATATTCGGGAACACAGCTGAGATCCACCGTATGTACGCGGAGGTG
AAGTCAAAATCCATTTCTTTTGGGCATGACATACTTCATCGTGTAGCTCCACATTACCAC
CGGTGGTCATCTGATTATGGGAAGACTTTCGTGTGGTGGTTCGGGCCAATTCCCAGGTTG
GGTATAGCGGACCCGGAGTTGATTAAGGAGGTTCTTATGAATACAAGTGGCTGCTATGGC
AAGATTGGGTTGAACCCTTTGTCTAAGCTGCTGTTTGGAGATGGACTCGTTGTGTTGGAG
GGTGAGAAGTGGGCTCTTCACAGAAGAATCAGTAACCAGGTCTTCAACATGGAGAGGGTT
AAGGGGTGGATTTCAGAAATTGTGGCTAGTGTTACAAAGATGATGGAGAAGTGGGAGGAA
GAAAGAGGAGGGAGGGAGGAGTTGGAGATTGATGCGCACAAAGAACTGCACAACCTCACA
GCAGATATCATATCAAGAACTGCTTTTGGAAGCAGCTTTGAAGAGGGGAAGCGCATTTTT
GAATTACAAGAACAGCAGATGCACCTTGTCTCCCAGGCTATAAGAAGTGTTTATATTCCC
GGCTTCAGATTTTTGCCCACTAAGAAGAACAGAGAAAGGTGGAGACTTGAGGAGGAAACT
CGAAAGTCAATTCGGATGTTAATTGAGACTAATAGCAAAGCAAAGGAAAATTCAGAAAAT
TTAATTAGTCTATTAATGTCTGCCAACAAGAATCAGCAGGGAGGAGAAGAGATGTTTGGA
GTGGAGGATGTTATAGGCGAATGCAAGACATTCTACTTTGCAGGAAAGGAAACGACTGCT
AATCTTTTGACTTGGGCTCTTCTTCTTCTAGCTTTTCATCAAGAATGGCAAGACAAAGCA
CGGGAAGAAGTGGTTCGCATCTATGGACACAATGCGCCTTCTGCAGCAGAGAATTTAAAC
GACCTTAAAATTGTAAGCATGATACTCAATGAAACACTTCGACTCTACCCCCCTGTTGTG
GCGATGACAAGGAAAGTATCCAGAAATGTCAAGCTAGGGAGTCTAGATATTCCTGCAAAC
ACCCAACTGTACTTGGCCATGACTGCTGTTCATCACGACCCTAAAATATGGGGTGAAGAT
GCTAATGATTTCAATCCACTGAGATTTAAGGAGCCTCGGAAGCATCTAGCCTCGTTTTTC
CCCTTTGGGTTGGGCCCCAGGATCTGTGTAGGTCAAACTCTTGCAGTGGTTGAGGCAAAA
ATTGCCCTCTCTATGATCATCCAACATTATTCTTTTGAGTTATCATCAACATATGTTCAT
GCCCCAATGCAGTTTATCACCCTGCAGCCTCAGTATGGTGCTCACATTCTCTTTAGAAGG
ATTTTAAGCTGAAAATTTTCCTGGTGTTTGGAGTTTCTGTGATAAAGATGAGCCAGAGTA
TCTAATATGGTAGTGTAAACTAATTTGGTATATGATATTGTGGGATTATGTAATAGTATG
TATTAATTGAAATAAACTTGTTATGTATTCAGCTTGGTGGATTGA