Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g12160.t01
CDS Infomation

cds chromosome:12X:18:10334571:10341952:-1 gene:VIT_18s0001g12160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCATCATCCTATTTTTCAAGACTGAGAAAGGCAGTTCACCATGGGATCCAAAGATCA
ACCATCGGGCAAGGAGGTGGGCTCCAAGACTCGGTGGAGGTTCTACTTTGGCGAGGAAAA
CTGTTGTTTGGGAACTCTAGGTTGTTTCATTCTAAACCATTTTCAAGCTTATCAGACCTG
CATGTATTATTACACCCTGGCACTGATTTTGTGGCAAGATCAGATTCACATTTAGGAAAT
CAAAGAAGGACTCTTTCTGTTGTTGGAACACTTTCTCGCGCGTTCTCCATTCCATCCGTG
TCTGGCCCTTCATTGCAGGCTTGTGCATATCACATCGATTCTGCACTCTCTAAGCCAGGC
GTCTTTTCCTATGTGTCACAGAAGACACCTATGGCTGCTTGTAGTCCCAGAGCAGTGTTA
GGTGATTGCCACTTAGATAATTTTATTTCAAGGCATGTGCATCTCTCAGTGTCTATAAAA
AATGGTAGTAATTTTCATGGCAATAGAGGTTTCAATAGCTGCAGAAAGGCTAGCATGAGC
TTAACAATTCAAGAGCAGTCCAATAATTGTTTGCTTTATGGATATTTCATATACAATGCT
GCAAAGAGGAGAAGCAATTCTAATCCATATATTTTATCTGGATTGAGAGATTTCCATGGA
TCATTATCTGCATGTTACTCTGCTGGAACTGCACCCGATATGTCATTTCACAATTCTCAA
CTTGAGGAACAGCTTGCAAATTCTTCGGTTTCTTCTGAACAGAACATCCAATCGGACAGA
ACCTTGAAATTTCTATCAGGGTCATGTTACCTGCCCCATCCTGACAAAGAAGAAACTGGT
GGTGAGGATGCTCACTTCATTTGTATTGATGAACATGCCATAGGTGTGGCAGATGGTGTT
GGTGGCTGGGCAGAACTTGGTGTTGATTCAGGGCAGTATGCACGAGAACTCATGTCTAAT
TCAGTAACTGCAATCCAAGAGGAGCCTAAGGGTTCTGTGGACCCAGCTAGGGTTTTGGAG
AAAGCTCACTTTAGCACAAAAGCCAAAGGGTCCTCAACAGCATGCATTATAGCCCTCACA
GAGCAGGGTCTCCATGCCATTAATTTAGGGGACAGTGGATTCATAGTGATAAGAGATGGA
TGTACTGTCTTCCGGTCCCCAGTACAGCAGCATGATTTCAATTTCACCTATCAACTAGAG
AGTGGAAATGGTGGTGATTTACCTAGCTCTGGTCAGGTTTTTACAATTCCTGTTGCTCCA
GGAGATGTTGTAATTGCTGGCACAGATGGACTGTTTGACAATCTGTACAATAATGAGGTT
ATCGCAGTGGTGGTTCATGCCACTAGAGCCAGTTTAGGGCCTCAGGTGACAGCTCAGAAG
ATTGCAGCATTAGCACGCCAACGAGCACAGGACAAAAACCGGCAGACACCTTTCTCCACT
GCTGCCCAAGATGCTGGGATCCGTTATTATGGTGGCAAGCTTGATGATATCACTGTCGTT
GTTTCCTATATTACCAGTTACAGTAATGGATACCGCTCTTCCAACAGCTCCTGGCTCTGA

Peptide Sequence

PEP ID

VIT_18s0001g12160.t01
PEP Infomation

pep chromosome:12X:18:10334571:10341952:-1 gene:VIT_18s0001g12160 transcript:VIT_18s0001g12160.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSSSYFSRLRKAVHHGIQRSTIGQGGGLQDSVEVLLWRGKLLFGNSRLFHSKPFSSLSDL
HVLLHPGTDFVARSDSHLGNQRRTLSVVGTLSRAFSIPSVSGPSLQACAYHIDSALSKPG
VFSYVSQKTPMAACSPRAVLGDCHLDNFISRHVHLSVSIKNGSNFHGNRGFNSCRKASMS
LTIQEQSNNCLLYGYFIYNAAKRRSNSNPYILSGLRDFHGSLSACYSAGTAPDMSFHNSQ
LEEQLANSSVSSEQNIQSDRTLKFLSGSCYLPHPDKEETGGEDAHFICIDEHAIGVADGV
GGWAELGVDSGQYARELMSNSVTAIQEEPKGSVDPARVLEKAHFSTKAKGSSTACIIALT
EQGLHAINLGDSGFIVIRDGCTVFRSPVQQHDFNFTYQLESGNGGDLPSSGQVFTIPVAP
GDVVIAGTDGLFDNLYNNEVIAVVVHATRASLGPQVTAQKIAALARQRAQDKNRQTPFST
AAQDAGIRYYGGKLDDITVVVSYITSYSNGYRSSNSSWL

Transcript Sequence

Transcript ID

VIT_18s0001g12160.t01
Transcript Infomation

cdna chromosome:12X:18:10334571:10341952:-1 gene:VIT_18s0001g12160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTAGGGGTAGGGTTTCGGTTTCGTCCAGAAAGGTGTAGTTTACTGGCCTCTATTTTTTA
ATTTTGGTTTATGTTTTTCTGAGTTTTTGTAAAATTTCCCTTTTTTTGAATTTTTTTTCG
TTTGGTTGGTGGGAATATGAAGGGAAAGAGCGAATGGTTTTTGACTTCTCAGCCCTTTTC
ACTGTTTGGGAGACTGGGAAATTCTAATTTAATTATTGGATTAGTTTACTTGAGTTGTTT
CTGTGTTCCTTAACTCAGAGGAGTAACTCTACTGTGGATGCATTAAGAGTGATGAGAATT
TTTTTAATTTGTGGCGCTAATGATCTGGTTCTCTACAATAGAAGTGTTCAACAAAAGTTG
TTCTATTTAAGAGGGTAAGATGTCATCATCCTATTTTTCAAGACTGAGAAAGGCAGTTCA
CCATGGGATCCAAAGATCAACCATCGGGCAAGGAGGTGGGCTCCAAGACTCGGTGGAGGT
TCTACTTTGGCGAGGAAAACTGTTGTTTGGGAACTCTAGGTTGTTTCATTCTAAACCATT
TTCAAGCTTATCAGACCTGCATGTATTATTACACCCTGGCACTGATTTTGTGGCAAGATC
AGATTCACATTTAGGAAATCAAAGAAGGACTCTTTCTGTTGTTGGAACACTTTCTCGCGC
GTTCTCCATTCCATCCGTGTCTGGCCCTTCATTGCAGGCTTGTGCATATCACATCGATTC
TGCACTCTCTAAGCCAGGCGTCTTTTCCTATGTGTCACAGAAGACACCTATGGCTGCTTG
TAGTCCCAGAGCAGTGTTAGGTGATTGCCACTTAGATAATTTTATTTCAAGGCATGTGCA
TCTCTCAGTGTCTATAAAAAATGGTAGTAATTTTCATGGCAATAGAGGTTTCAATAGCTG
CAGAAAGGCTAGCATGAGCTTAACAATTCAAGAGCAGTCCAATAATTGTTTGCTTTATGG
ATATTTCATATACAATGCTGCAAAGAGGAGAAGCAATTCTAATCCATATATTTTATCTGG
ATTGAGAGATTTCCATGGATCATTATCTGCATGTTACTCTGCTGGAACTGCACCCGATAT
GTCATTTCACAATTCTCAACTTGAGGAACAGCTTGCAAATTCTTCGGTTTCTTCTGAACA
GAACATCCAATCGGACAGAACCTTGAAATTTCTATCAGGGTCATGTTACCTGCCCCATCC
TGACAAAGAAGAAACTGGTGGTGAGGATGCTCACTTCATTTGTATTGATGAACATGCCAT
AGGTGTGGCAGATGGTGTTGGTGGCTGGGCAGAACTTGGTGTTGATTCAGGGCAGTATGC
ACGAGAACTCATGTCTAATTCAGTAACTGCAATCCAAGAGGAGCCTAAGGGTTCTGTGGA
CCCAGCTAGGGTTTTGGAGAAAGCTCACTTTAGCACAAAAGCCAAAGGGTCCTCAACAGC
ATGCATTATAGCCCTCACAGAGCAGGGTCTCCATGCCATTAATTTAGGGGACAGTGGATT
CATAGTGATAAGAGATGGATGTACTGTCTTCCGGTCCCCAGTACAGCAGCATGATTTCAA
TTTCACCTATCAACTAGAGAGTGGAAATGGTGGTGATTTACCTAGCTCTGGTCAGGTTTT
TACAATTCCTGTTGCTCCAGGAGATGTTGTAATTGCTGGCACAGATGGACTGTTTGACAA
TCTGTACAATAATGAGGTTATCGCAGTGGTGGTTCATGCCACTAGAGCCAGTTTAGGGCC
TCAGGTGACAGCTCAGAAGATTGCAGCATTAGCACGCCAACGAGCACAGGACAAAAACCG
GCAGACACCTTTCTCCACTGCTGCCCAAGATGCTGGGATCCGTTATTATGGTGGCAAGCT
TGATGATATCACTGTCGTTGTTTCCTATATTACCAGTTACAGTAATGGATACCGCTCTTC
CAACAGCTCCTGGCTCTGATTAGACCGTTTGGACCATGTCTCTTGGTTTTCTGAAGTAGT
GGCAATCCACTAGTATTGCAAGGAAGCAGATACAGTAGCTGATATTTGGTATCATGGTGC
TTCAAATAATCCAGATTAATTGACACATTTCCCTATCTCCCTTTTGTCCATAGTTTTGCA
AAATGGTAGTCATGGTGCTTTGCACTCAAAACCACAAGTTTTATACATATGAATATATTC
TTGACACTTTTTTT