Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g12000.t01
CDS Infomation

cds chromosome:12X:18:10227096:10228470:-1 gene:VIT_18s0001g12000 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGTCGATGAATTTGGTGGATCGACCATGGGTTCGTGATTTCAATCAATCAAGCTTA
TTTGGGTGTGCGCTGGGAATGAGCTATGGCCCCATTGGGGCCGGACCTGGTTGCACATCA
TCTGTGAGAGTGGGAACAAAGACGCCACATTTGCGTGGTGCGGTTTTTGCGATTATCACA
AAGGAGGACTCTGTGAAGGAGGGGAAGGGCCCCACCCAGAAGGAAACGCCCTTCAGTTTC
AAGGATTACATGATTCAGAAGGCCAGTTCGGTGCATAAAGCCTTGGACGAGGCTGTTTAC
GTGAAAAGCCCTATCAAAATCCATGAAGCAATGCGCTACTCTCTCCTCGCCGGCGGCAAG
CGTGTCCGACCGGCTCTCTGTTTAGCCGCTTGCGAGCTCGTGGGCGGAGATGAGTCCAAC
GCCATGCCGGCGGCTTGTGCGGTCGAAATGATTCACACTATGTCTCTGATTCACGACGAC
CTCCCCTGTATGGACAACGACGACCTCCGGCGAGGAAAGCCCACCAACCACAAAGTCTTC
GGGGAAGACGTCGCCGTTCTGGCCGGTGATTCTCTTCTGGCATTCGCATTCGAGCACCTT
GCGACTGCCACAAGCGGGGTTTCGTCATCCAGAATTGTGGCAGCCGTGGGTGAATTGGCG
AAATCCATTGGAGCAGAGGGGCTAGTTGCAGGGCAGGTGGTGGATATAAGCAGTACAGGA
CAGTCCGATGTGGGGCTAGACCAACTGGAGTTCATACACATACACAAGACCGCGGCATTG
CTGGAGGCAGCGGTGGTTCTTGGGGCCTTACTGGGAGGTGGGAGCGATGAGGAGGTGGAG
AAATTGAGAAAGTATGCGAGGCAGGTTGGGCTACTGTTTCAAGTGGTGGATGACATTCTT
GATGTCACCAAATCATCTCAGGAACTGGGGAAGACGGCAGGCAAGGATTTGGTAACCGAT
AAGGCAACCTACCCCAAACTAATGGGGCTGGAGAAATCAAGAGAATTTGCAGAGAATCTC
AACAAGGAAGCAAAGGAACAGCTTTCTGGGTTTGATTTGGAGAAGGCAGCGCCTTTGATT
GCGCTTGCTGATTATATCGCTTACCGGCAAAATTAA

Peptide Sequence

PEP ID

VIT_18s0001g12000.t01
PEP Infomation

pep chromosome:12X:18:10227096:10228470:-1 gene:VIT_18s0001g12000 transcript:VIT_18s0001g12000.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRSMNLVDRPWVRDFNQSSLFGCALGMSYGPIGAGPGCTSSVRVGTKTPHLRGAVFAIIT
KEDSVKEGKGPTQKETPFSFKDYMIQKASSVHKALDEAVYVKSPIKIHEAMRYSLLAGGK
RVRPALCLAACELVGGDESNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVF
GEDVAVLAGDSLLAFAFEHLATATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTG
QSDVGLDQLEFIHIHKTAALLEAAVVLGALLGGGSDEEVEKLRKYARQVGLLFQVVDDIL
DVTKSSQELGKTAGKDLVTDKATYPKLMGLEKSREFAENLNKEAKEQLSGFDLEKAAPLI
ALADYIAYRQN

Transcript Sequence

Transcript ID

VIT_18s0001g12000.t01
Transcript Infomation

cdna chromosome:12X:18:10227096:10228470:-1 gene:VIT_18s0001g12000 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGTTTTGGCAGGTGCCTGTCAATCCAATTGCTCACTTCCACCCGCTCCTTTACTCTCTGC
CCCCTCAAGTGAAGAGGAAGTTTTAGGGGCGATTCCACCATTAGAGAGGGTCTGTGTGTG
ATCATCTCGTGTAAGTGGTGGGTGTTGTCGGTTTTGTCCTCTGATAAAAGACGATAAGAT
GAGGTCGATGAATTTGGTGGATCGACCATGGGTTCGTGATTTCAATCAATCAAGCTTATT
TGGGTGTGCGCTGGGAATGAGCTATGGCCCCATTGGGGCCGGACCTGGTTGCACATCATC
TGTGAGAGTGGGAACAAAGACGCCACATTTGCGTGGTGCGGTTTTTGCGATTATCACAAA
GGAGGACTCTGTGAAGGAGGGGAAGGGCCCCACCCAGAAGGAAACGCCCTTCAGTTTCAA
GGATTACATGATTCAGAAGGCCAGTTCGGTGCATAAAGCCTTGGACGAGGCTGTTTACGT
GAAAAGCCCTATCAAAATCCATGAAGCAATGCGCTACTCTCTCCTCGCCGGCGGCAAGCG
TGTCCGACCGGCTCTCTGTTTAGCCGCTTGCGAGCTCGTGGGCGGAGATGAGTCCAACGC
CATGCCGGCGGCTTGTGCGGTCGAAATGATTCACACTATGTCTCTGATTCACGACGACCT
CCCCTGTATGGACAACGACGACCTCCGGCGAGGAAAGCCCACCAACCACAAAGTCTTCGG
GGAAGACGTCGCCGTTCTGGCCGGTGATTCTCTTCTGGCATTCGCATTCGAGCACCTTGC
GACTGCCACAAGCGGGGTTTCGTCATCCAGAATTGTGGCAGCCGTGGGTGAATTGGCGAA
ATCCATTGGAGCAGAGGGGCTAGTTGCAGGGCAGGTGGTGGATATAAGCAGTACAGGACA
GTCCGATGTGGGGCTAGACCAACTGGAGTTCATACACATACACAAGACCGCGGCATTGCT
GGAGGCAGCGGTGGTTCTTGGGGCCTTACTGGGAGGTGGGAGCGATGAGGAGGTGGAGAA
ATTGAGAAAGTATGCGAGGCAGGTTGGGCTACTGTTTCAAGTGGTGGATGACATTCTTGA
TGTCACCAAATCATCTCAGGAACTGGGGAAGACGGCAGGCAAGGATTTGGTAACCGATAA
GGCAACCTACCCCAAACTAATGGGGCTGGAGAAATCAAGAGAATTTGCAGAGAATCTCAA
CAAGGAAGCAAAGGAACAGCTTTCTGGGTTTGATTTGGAGAAGGCAGCGCCTTTGATTGC
GCTTGCTGATTATATCGCTTACCGGCAAAATTAACGGGCAGTCATTTGTTTACAAGACCC
TTACAGTTGAATATTTATATGGCGTAGCAATAGTGGGTGCTGGGCACCAAACCCA