Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g11980.t01
CDS Infomation

cds chromosome:12X:18:10213462:10217921:-1 gene:VIT_18s0001g11980 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATAAATGGATCTCCTCTCCCCGACAACGTTATGATAGAAGTGAATCCTTACCAGCAT
AACCCCTCATGTTTATCTGATAGATTTTGGTACTTAACAAGCTCTGAGGACACCAAATTT
GCAGAGGGATTCTGGAAGCCCAAGGGTGAGCCCTATGAGATATTTTCGAACTCTTCTATC
ACTGGTTGGAGAACTACTTTTGAATTCTACGAAGGTACCACCCCACATGTCCTTAAAACC
GACTGGGTGTTGCAACAGTACAAGATAACTCAGAAGGGACAGTCCAAAAACATCAAGCCA
ATGGCCTCCAGTTCACTCTGTAGAGTCTTCCAAAGCAGGGGACAAAGTTCAAGCCATGAA
ATGCAGAAGGAATTGGGGGTTGCAAATGTTGCTGATGAAAACCACACTTGTTCCAAGCCT
TCTGTGGTTTCAAATACTGACAATAGCACTGGGCAAGGTTCCAAAAGCGAGTCTCAGGTG
CAACATGGCAATGGTGAGACTGGACTATTGGCTGCGCCAGAAAGATCTCTGAATCACCCT
GTAGACAACCTGCCTGAAATTGATTATTTTTCTGATGGTGACTTTTTGGAGTTGGGGGAT
CTTGCTGACCCAGTATCACCTTCTTCCAGTTCAGACAATTCTAGTTGCCTAAGCCAGACA
TCAGATGAATGTTTTGATTCATTAGCCTTGTTGCGAGATTTAGAATGTGACAAGGATGTG
GGTTGCAAGTTTAGTGTTGCTGCATTGGTCATGCCAGACAAGGTTGTTTTGCAGCCAGCC
AGTTCAGGATCTCTTACTTGTGATGACAGAAGGAAGTTACCGGCAGAAGGACCCCCCAAA
ACTGATAGTTCTTTACTTGGTTCAACAAAACTGTCTGAGAAGAAGGGCTTGAAGCGTGCA
ATTGCAACTCAGGAAGCAGACAATAAGGTGGAAGGTCCATCATCAAATCCTCATAATTTG
GTGGCATCATCTGGCAGCAACAAAGCAGCATCCTCAGATGAAAAAGGGAAAGCTGCTGCT
GACAGAAAGAAGAAGCTAAAGAAGTATTTGTGCTTCATGCCATTCTAG

Peptide Sequence

PEP ID

VIT_18s0001g11980.t01
PEP Infomation

pep chromosome:12X:18:10213462:10217921:-1 gene:VIT_18s0001g11980 transcript:VIT_18s0001g11980.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MINGSPLPDNVMIEVNPYQHNPSCLSDRFWYLTSSEDTKFAEGFWKPKGEPYEIFSNSSI
TGWRTTFEFYEGTTPHVLKTDWVLQQYKITQKGQSKNIKPMASSSLCRVFQSRGQSSSHE
MQKELGVANVADENHTCSKPSVVSNTDNSTGQGSKSESQVQHGNGETGLLAAPERSLNHP
VDNLPEIDYFSDGDFLELGDLADPVSPSSSSDNSSCLSQTSDECFDSLALLRDLECDKDV
GCKFSVAALVMPDKVVLQPASSGSLTCDDRRKLPAEGPPKTDSSLLGSTKLSEKKGLKRA
IATQEADNKVEGPSSNPHNLVASSGSNKAASSDEKGKAAADRKKKLKKYLCFMPF

Transcript Sequence

Transcript ID

VIT_18s0001g11980.t01
Transcript Infomation

cdna chromosome:12X:18:10213462:10217921:-1 gene:VIT_18s0001g11980 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGTGGTCAAGTGGGCGAAGTTTGGGGGAGAGTGAGAGAAGGGGGTTTTCGCAAGCTGCTG
TTGTAAAAGATCTTGGGTCACCATGTATCTTTCACCATCCGTCTCCCCGCCTAATGAAAT
TAGCTTATATTGGAGCGATGAGGAGCTCTTTACGTGTTTGCAGGGAATGATAAATGGATC
TCCTCTCCCCGACAACGTTATGATAGAAGTGAATCCTTACCAGCATAACCCCTCATGTTT
ATCTGATAGATTTTGGTACTTAACAAGCTCTGAGGACACCAAATTTGCAGAGGGATTCTG
GAAGCCCAAGGGTGAGCCCTATGAGATATTTTCGAACTCTTCTATCACTGGTTGGAGAAC
TACTTTTGAATTCTACGAAGGTACCACCCCACATGTCCTTAAAACCGACTGGGTGTTGCA
ACAGTACAAGATAACTCAGAAGGGACAGTCCAAAAACATCAAGCCAATGGCCTCCAGTTC
ACTCTGTAGAGTCTTCCAAAGCAGGGGACAAAGTTCAAGCCATGAAATGCAGAAGGAATT
GGGGGTTGCAAATGTTGCTGATGAAAACCACACTTGTTCCAAGCCTTCTGTGGTTTCAAA
TACTGACAATAGCACTGGGCAAGGTTCCAAAAGCGAGTCTCAGGTGCAACATGGCAATGG
TGAGACTGGACTATTGGCTGCGCCAGAAAGATCTCTGAATCACCCTGTAGACAACCTGCC
TGAAATTGATTATTTTTCTGATGGTGACTTTTTGGAGTTGGGGGATCTTGCTGACCCAGT
ATCACCTTCTTCCAGTTCAGACAATTCTAGTTGCCTAAGCCAGACATCAGATGAATGTTT
TGATTCATTAGCCTTGTTGCGAGATTTAGAATGTGACAAGGATGTGGGTTGCAAGTTTAG
TGTTGCTGCATTGGTCATGCCAGACAAGGTTGTTTTGCAGCCAGCCAGTTCAGGATCTCT
TACTTGTGATGACAGAAGGAAGTTACCGGCAGAAGGACCCCCCAAAACTGATAGTTCTTT
ACTTGGTTCAACAAAACTGTCTGAGAAGAAGGGCTTGAAGCGTGCAATTGCAACTCAGGA
AGCAGACAATAAGGTGGAAGGTCCATCATCAAATCCTCATAATTTGGTGGCATCATCTGG
CAGCAACAAAGCAGCATCCTCAGATGAAAAAGGGAAAGCTGCTGCTGACAGAAAGAAGAA
GCTAAAGAAGTATTTGTGCTTCATGCCATTCTAGATCAGCCTTTGCTTATTATAAGTGTA
TATTTAAATGTTCTAGCAAATGTGACTGTAAGGCATTTTAAGGTTGTTGGTGTTGTTTCT
TCTAGGGGTTTGTTTTTTCTTTCAGAGCTGAAAAGGAAAACCCTTTTTTTTTCCTGAAAG
TAAAAAAAAAAAAAAAAACGTTTTCCTTTTCAGCCTATTACAAGGACTAGAAAAAAGTAG
ATTAGTTGGCTGATGATACCCAAGGAAATAAGGGTTAGTTATTGAAATTGAGTCATACCC
AGCAGAAGTGTACACAAATGACTTATTTGTAACTGGGTTGTTGTAAAATTTACTTTAATG
CTATATACCACATCTTAAGTGGGATGTATATCTTT