Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g11850.t01
CDS Infomation

cds chromosome:12X:18:10109055:10112184:1 gene:VIT_18s0001g11850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCACAGGTACTTCTCCATCTTCACTCCTCCACTTCCCTCACGCCTCCATCTCCGTCGG
CCAATCCACCTTTCACGGACCCTTCTCTGGAAGCTCCGGGACGAATCCCATCCAGCCCCA
CCCGAATTAGTCTCCCGCATCTGCCGTCTCGTGCTTCTCCGCCGTTGCAATGCCATCTCC
AAACTTAATTTCGTCTTCTCTGACGATATCGTCGACGCTGTTCTCCGGAACCTCAGACTA
AACCCTACTGCTTCTCTAGGGTTTTTCCAATTTGTTTCTAAGCAGCAAAATTTTAGACCC
AACGTTAAGTCTTATTGTAAGCTTGTTCATATATTGTCCAGAGGTCGAATGTATGATGAG
ACCAGAGCGTACTTGAACCAGCTCGTTGATCTTTGTAAGTTCAAGGATCGTGGCAATGTG
ATTTGGGATGAATTAGTTGGGGTTTATCGAGAATTTGCATTTTCGCCCACTGTTTTTGAT
ATGATTCTGAAGGTGTATGTGGAAAAGGGTTTGACAAAGAATGCATTGTACGTGTTTGAT
AATATGGGCAAGTGTGGCCGAATACCAAGCTTGCGGTCTTGCAATAGTTTGTTGAACAAT
TTGGTTAAAAATGGGGAGACCCACACGGCACATTATGTTTATCAGCAAATGATCAGGGTT
GGAATAGTTCCGGACGTTTTTATGGTTTCAATAATGGTGAATGCATTTTGCAAGGACGGG
AAAGTGGATGAAGCAGCGGGATTTGTGAAAAAAATGGAGAATTTGGGTGTTGAACCAAAT
ATAGTGACCTACCATAGTTTGATTAATGGCTATGTTAGTCTGGGGGATGTGGAAGCTGCA
AAAGGAGTGCTGAAATTCATGAGTGAAAAGGGGGTTTCAAGAAATGTGGTTACATATACC
CTGTTGATCAAGGGTTATTGCAAACAATGTAAAATGGACGAGGCAGAGAAGGTGCTTAGA
GGAATGCAGGAGGAGGCAGCTTTGGTTCCTGATGAGCGTGCTTATGGTGTCTTGATAGAT
GGTTATTGTCGAACTGGAAAAATAGATGATGCTGTTAGGCTTTTGGATGAGATGTTGAGA
TTGGGCCTGAAAACAAACTTATTTATTTGTAATTCATTGATTAATGGATATTGCAAACGT
GGTGAAATTCATGAAGCAGAGGGAGTGATAACCCGTATGGTGGATTGGAACTTGAAGCCA
GACTCTTATAGCTACAATACTCTACTGGATGGGTACTGTAGAGAAGGCCATACATCTGAA
GCTTTCAACCTTTGTGACAAGATGCTTCAGGAAGGGATTGAACCAACCGTCTTAACTTAT
AATACTCTTCTTAAAGGCTTGTGCCGTGTGGGTGCCTTTGATGATGCTTTGCAAATTTGG
CATTTGATGATGAAAAGGGGTGTGGCTCCTGATGAGGTTGGCTATAGTACTCTGCTTGAT
GGGTTATTCAAGATGGAAAATTTTGAAGGAGCTTCAACATTGTGGAAAGATATTCTAGCA
AGAGGATTTACGAAAAGTAGGATTACTTTCAATACAATGATCAGCGGATTATGTAAGATG
GGGAAAATGGTTGAAGCGGAGGAAATTTTTGACAAGATGAAGGATCTGGGATGTTCCCCT
GATGGAATAACATACAGAACCCTAATTGATGGGTATTGTAAAGCCAGCAATGTTGGACAA
GCTTTTAAAGTTAAGGGTGCCATGGAAAGGGAACCAATTTCACCTTCCATTGAGATGTAC
AATTCTCTTATTAGTGGACTTTTTAAGTCTAGGAGATTAGTTGAAGTGACAGATCTTCTC
ACTGAGATGGGCATAAGGGGATTGACCCCAAATATTGTTACTTATGGAGCCCTTATTGAT
GGTTGGTGCAAAGAAGGGATGCTGGATAAAGCTTTTAGTTCATATTTTGAGATGACTGAG
AATGGGCTATCTGCCAATATAATTATATGCAGCACAATGGTCAGTGGCCTATATAGGCTT
GGTAGGATTGATGAAGCAAATTTGCTGATGCAGAAAATGGTGGATCATGGTTTTTTTCCT
GATCATGAATGTTTCCTCAAGTCTGACATTAGATATGCAGCCATTCAGAAAATTGCAGAT
TCTCTTGATGAAAGTTGTAAAACTTTTCTTCTACCCAACAATATTGTGTACAATATTGCT
ATTGCGGGCCTTTGCAAGACTGGGAAGGTTGATGATGCAAGAAGATTTTTCTCTATGTTA
TCACTGAAAGGATTTGTTCCGGATAATTTTACGTACTGTACCCTGATTCATGGCTATTCT
GCGGCTGGTAATGTTGATGAAGCTTTTCGCTTAAGGGACGAGATGCTGAGAAGGGGTCTT
GTTCCAAACATAGTTACATACAATGCTCTTATAAATGGCTTGTGCAAATCAGAAAACGTG
GATCGAGCACAGAGGCTTTTCCATAAACTTCACCAGAAGGGATTGTTTCCAAATGTTGTT
ACCTATAATACATTGATCGATGGATATTGCAAGATTGGTAATATGGATGCAGCCTTCAAA
CTGAAAGATAAAATGATAGAAGAAGGGATTTCTCCTTCTATTCAGTGTAACCTCCTGGAG
AGTGTCAGTATGTGGCTAGTTGGTATCCTCCCAAAATCATAA

Peptide Sequence

PEP ID

VIT_18s0001g11850.t01
PEP Infomation

pep chromosome:12X:18:10109055:10112184:1 gene:VIT_18s0001g11850 transcript:VIT_18s0001g11850.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MHRYFSIFTPPLPSRLHLRRPIHLSRTLLWKLRDESHPAPPELVSRICRLVLLRRCNAIS
KLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDE
TRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFD
NMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDG
KVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYT
LLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLR
LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE
AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLD
GLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP
DGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLL
TEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRL
GRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIA
IAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGL
VPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFK
LKDKMIEEGISPSIQCNLLESVSMWLVGILPKS

Transcript Sequence

Transcript ID

VIT_18s0001g11850.t01
Transcript Infomation

cdna chromosome:12X:18:10109055:10112184:1 gene:VIT_18s0001g11850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAATGCACAGGTACTTCTCCATCTTCACTCCTCCACTTCCCTCACGCCTCCATCTCCGTC
GGCCAATCCACCTTTCACGGACCCTTCTCTGGAAGCTCCGGGACGAATCCCATCCAGCCC
CACCCGAATTAGTCTCCCGCATCTGCCGTCTCGTGCTTCTCCGCCGTTGCAATGCCATCT
CCAAACTTAATTTCGTCTTCTCTGACGATATCGTCGACGCTGTTCTCCGGAACCTCAGAC
TAAACCCTACTGCTTCTCTAGGGTTTTTCCAATTTGTTTCTAAGCAGCAAAATTTTAGAC
CCAACGTTAAGTCTTATTGTAAGCTTGTTCATATATTGTCCAGAGGTCGAATGTATGATG
AGACCAGAGCGTACTTGAACCAGCTCGTTGATCTTTGTAAGTTCAAGGATCGTGGCAATG
TGATTTGGGATGAATTAGTTGGGGTTTATCGAGAATTTGCATTTTCGCCCACTGTTTTTG
ATATGATTCTGAAGGTGTATGTGGAAAAGGGTTTGACAAAGAATGCATTGTACGTGTTTG
ATAATATGGGCAAGTGTGGCCGAATACCAAGCTTGCGGTCTTGCAATAGTTTGTTGAACA
ATTTGGTTAAAAATGGGGAGACCCACACGGCACATTATGTTTATCAGCAAATGATCAGGG
TTGGAATAGTTCCGGACGTTTTTATGGTTTCAATAATGGTGAATGCATTTTGCAAGGACG
GGAAAGTGGATGAAGCAGCGGGATTTGTGAAAAAAATGGAGAATTTGGGTGTTGAACCAA
ATATAGTGACCTACCATAGTTTGATTAATGGCTATGTTAGTCTGGGGGATGTGGAAGCTG
CAAAAGGAGTGCTGAAATTCATGAGTGAAAAGGGGGTTTCAAGAAATGTGGTTACATATA
CCCTGTTGATCAAGGGTTATTGCAAACAATGTAAAATGGACGAGGCAGAGAAGGTGCTTA
GAGGAATGCAGGAGGAGGCAGCTTTGGTTCCTGATGAGCGTGCTTATGGTGTCTTGATAG
ATGGTTATTGTCGAACTGGAAAAATAGATGATGCTGTTAGGCTTTTGGATGAGATGTTGA
GATTGGGCCTGAAAACAAACTTATTTATTTGTAATTCATTGATTAATGGATATTGCAAAC
GTGGTGAAATTCATGAAGCAGAGGGAGTGATAACCCGTATGGTGGATTGGAACTTGAAGC
CAGACTCTTATAGCTACAATACTCTACTGGATGGGTACTGTAGAGAAGGCCATACATCTG
AAGCTTTCAACCTTTGTGACAAGATGCTTCAGGAAGGGATTGAACCAACCGTCTTAACTT
ATAATACTCTTCTTAAAGGCTTGTGCCGTGTGGGTGCCTTTGATGATGCTTTGCAAATTT
GGCATTTGATGATGAAAAGGGGTGTGGCTCCTGATGAGGTTGGCTATAGTACTCTGCTTG
ATGGGTTATTCAAGATGGAAAATTTTGAAGGAGCTTCAACATTGTGGAAAGATATTCTAG
CAAGAGGATTTACGAAAAGTAGGATTACTTTCAATACAATGATCAGCGGATTATGTAAGA
TGGGGAAAATGGTTGAAGCGGAGGAAATTTTTGACAAGATGAAGGATCTGGGATGTTCCC
CTGATGGAATAACATACAGAACCCTAATTGATGGGTATTGTAAAGCCAGCAATGTTGGAC
AAGCTTTTAAAGTTAAGGGTGCCATGGAAAGGGAACCAATTTCACCTTCCATTGAGATGT
ACAATTCTCTTATTAGTGGACTTTTTAAGTCTAGGAGATTAGTTGAAGTGACAGATCTTC
TCACTGAGATGGGCATAAGGGGATTGACCCCAAATATTGTTACTTATGGAGCCCTTATTG
ATGGTTGGTGCAAAGAAGGGATGCTGGATAAAGCTTTTAGTTCATATTTTGAGATGACTG
AGAATGGGCTATCTGCCAATATAATTATATGCAGCACAATGGTCAGTGGCCTATATAGGC
TTGGTAGGATTGATGAAGCAAATTTGCTGATGCAGAAAATGGTGGATCATGGTTTTTTTC
CTGATCATGAATGTTTCCTCAAGTCTGACATTAGATATGCAGCCATTCAGAAAATTGCAG
ATTCTCTTGATGAAAGTTGTAAAACTTTTCTTCTACCCAACAATATTGTGTACAATATTG
CTATTGCGGGCCTTTGCAAGACTGGGAAGGTTGATGATGCAAGAAGATTTTTCTCTATGT
TATCACTGAAAGGATTTGTTCCGGATAATTTTACGTACTGTACCCTGATTCATGGCTATT
CTGCGGCTGGTAATGTTGATGAAGCTTTTCGCTTAAGGGACGAGATGCTGAGAAGGGGTC
TTGTTCCAAACATAGTTACATACAATGCTCTTATAAATGGCTTGTGCAAATCAGAAAACG
TGGATCGAGCACAGAGGCTTTTCCATAAACTTCACCAGAAGGGATTGTTTCCAAATGTTG
TTACCTATAATACATTGATCGATGGATATTGCAAGATTGGTAATATGGATGCAGCCTTCA
AACTGAAAGATAAAATGATAGAAGAAGGGATTTCTCCTTCTATTCAGTGTAACCTCCTGG
AGAGTGTCAGTATGTGGCTAGTTGGTATCCTCCCAAAATCATAA