Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_18s0001g11740.t01
CDS Infomation	cds chromosome:12X:18:10027143:10031929:-1 gene:VIT_18s0001g11740 gene_biotype:protein_coding transcript_biotype:protein_coding description:RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:E0CPX8]
Sequence	ATGGGGGACTACATCAGCAGCGAGGATGAGTACTATAATGATTATAACGATGATGATCGG GACTCTTTGGATGGGTACCAGCACTTTCGTTTTGAGGGTGGGTGCCAGAATGAGAGTGCG ACATCCAGTAAGGTAATTACAAAGGAATCTCTTTTGACAGCACAGAAGGAAGATTTGCAT AGAGTAATGGACCTGCTACCATTGGGGGAACACCATGCTAGAAGCTTACTTATTCATTGT CGTTGGGATGTTGAAAGGGTGTTGGCAGTCCTTGTGGAGAAGGGAAAAGAACAGCTATAT GCTGATGCGGGTGTGACAGTGGTGGAGCATGATGATCTTTCCTTGTCAAAGTTTTCATCT CCATTAACATGCAATATCTGCGTTGACGATGTATCTACTAACGAGATGACAATAATGGAC TGTGGCCACTACTTTTGTAACAATTGCTGGACGGGGTATTTTATTGTGAAGATAAATGAT GGTCAGAGTAGACGCATTAGGTGCATGGCATACAAGTGCAATGCTATTTGTGATGAAGCA AAAATCAGAAAGCTAGTAAGTGCAAGAGATCCTAATCTGGCAGAGAGATTCGATCGTTTT CTTTTGGAATCATACATTGAGGATAATAGAAGGGTGAAATGGTGCCCTAGTGTTCCCCAT TGTGGGAATGCCATTCGTGTTGAGGTTGATGAATTTTGCGAGGTTGAATGTGCGTGTGGT CTACAATTCTGTTTCAATTGCTCTTCTGAAGCACACTCACCTTGCTCATGCCGGATGTGG GAGCTTTGGGGCAAGAAGAGCCAGGATGGATCAGAGACGGTTAATTGGATTACAGTCCAT ACAAAGGCCTGCCCAAAATGTCAAAAACCAGTGGAAAAGAATGGCGGTTGCAACCTAGTG AGTTGTATATGTGGACAATCATTTTGTTGGCTGTGTGGTGGTGCCACTGGTAGAGACCAT ACATGGACAAATATCACTGGTCACAGTTGTGGGCGATATAAAGAAGAGGATGTGAACAAA TTGGAGCATGCAAAAAGGGAGCTCTCACGTTATGTTCACTATCATGATCGATACAAAGCT CACACGGATTCTTTTAAGCTTGAAATTAAGCTGAAGGAAACCATACAGGAAAATATATCA AAACTGGAAGAAAGGGATTCAGCATTCAAAGATTTCAGTTGGCTTACAAGTGGACTTAAC AGGCTCTTCAGGTCGAGGCGGGTTCTCTCATATTCCTACCCGTTTGCATTTTTCATGTTC GGTGACCTGTTCAATAATGAAATGACCGAGGCAGAAAAGGAAATAAAACAACACTTGTTT GAAGAACAACAGCAACAGCTTGAGGCAAATATTGAGAAGCTTTCATTATTCATAGAGGAG CCATTTCATCAGTACACGGAGGACAAAGTTGCAGAAACAAGAATGAAAATTATGAATATG TCTGCAATCACTGATAACCTCTGCAAAAAGATGTATGAGTGCATTGAGAATGATTTGTTG GGTCCCCTCCAGCAGGCAATTCATATTATAGCTCCTTATAAATCAAAAGGTGTGGAGAAA GCGTCAGAACTTCCGCTTTGTTGGGGGCCCAATGCTGGTGATTCTAGCATAAATGTGGAA GCAAATTTGAAGATAAATAAGACCAAAACGTCTTTCAAGAGCTACTGA

Peptide Sequence

PEP ID	VIT_18s0001g11740.t01
PEP Infomation	pep chromosome:12X:18:10027143:10031929:-1 gene:VIT_18s0001g11740 transcript:VIT_18s0001g11740.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:E0CPX8]
Sequence	MGDYISSEDEYYNDYNDDDRDSLDGYQHFRFEGGCQNESATSSKVITKESLLTAQKEDLH RVMDLLPLGEHHARSLLIHCRWDVERVLAVLVEKGKEQLYADAGVTVVEHDDLSLSKFSS PLTCNICVDDVSTNEMTIMDCGHYFCNNCWTGYFIVKINDGQSRRIRCMAYKCNAICDEA KIRKLVSARDPNLAERFDRFLLESYIEDNRRVKWCPSVPHCGNAIRVEVDEFCEVECACG LQFCFNCSSEAHSPCSCRMWELWGKKSQDGSETVNWITVHTKACPKCQKPVEKNGGCNLV SCICGQSFCWLCGGATGRDHTWTNITGHSCGRYKEEDVNKLEHAKRELSRYVHYHDRYKA HTDSFKLEIKLKETIQENISKLEERDSAFKDFSWLTSGLNRLFRSRRVLSYSYPFAFFMF GDLFNNEMTEAEKEIKQHLFEEQQQQLEANIEKLSLFIEEPFHQYTEDKVAETRMKIMNM SAITDNLCKKMYECIENDLLGPLQQAIHIIAPYKSKGVEKASELPLCWGPNAGDSSINVE ANLKINKTKTSFKSY

Transcript Sequence

Transcript ID	VIT_18s0001g11740.t01
Transcript Infomation	cdna chromosome:12X:18:10027143:10031929:-1 gene:VIT_18s0001g11740 gene_biotype:protein_coding transcript_biotype:protein_coding description:RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:E0CPX8]
Sequence	TTGATATTCAACCAAGTTTAATTTTCGTTACGATTCCGTAAACACCTCCGTTTTGGTAGG TTTGGAGTTACCTTCGTTTTCTTTTGGAAACACGAGGCTAAACACAACTCTTTCTCTTTT GGGTTTGGGGTTTTGCTAGACTCTATCAAATGTGACGCGATCGGCCCCCTAGATTGAGTC TCGATCGCCGTAAACGTTGATCGGAGCTTTGACTCTGCTCTGTACGTGTTCTTTTCGATG GGGGACTACATCAGCAGCGAGGATGAGTACTATAATGATTATAACGATGATGATCGGGAC TCTTTGGATGGGTACCAGCACTTTCGTTTTGAGGGTGGGTGCCAGAATGAGAGTGCGACA TCCAGTAAGGTAATTACAAAGGAATCTCTTTTGACAGCACAGAAGGAAGATTTGCATAGA GTAATGGACCTGCTACCATTGGGGGAACACCATGCTAGAAGCTTACTTATTCATTGTCGT TGGGATGTTGAAAGGGTGTTGGCAGTCCTTGTGGAGAAGGGAAAAGAACAGCTATATGCT GATGCGGGTGTGACAGTGGTGGAGCATGATGATCTTTCCTTGTCAAAGTTTTCATCTCCA TTAACATGCAATATCTGCGTTGACGATGTATCTACTAACGAGATGACAATAATGGACTGT GGCCACTACTTTTGTAACAATTGCTGGACGGGGTATTTTATTGTGAAGATAAATGATGGT CAGAGTAGACGCATTAGGTGCATGGCATACAAGTGCAATGCTATTTGTGATGAAGCAAAA ATCAGAAAGCTAGTAAGTGCAAGAGATCCTAATCTGGCAGAGAGATTCGATCGTTTTCTT TTGGAATCATACATTGAGGATAATAGAAGGGTGAAATGGTGCCCTAGTGTTCCCCATTGT GGGAATGCCATTCGTGTTGAGGTTGATGAATTTTGCGAGGTTGAATGTGCGTGTGGTCTA CAATTCTGTTTCAATTGCTCTTCTGAAGCACACTCACCTTGCTCATGCCGGATGTGGGAG CTTTGGGGCAAGAAGAGCCAGGATGGATCAGAGACGGTTAATTGGATTACAGTCCATACA AAGGCCTGCCCAAAATGTCAAAAACCAGTGGAAAAGAATGGCGGTTGCAACCTAGTGAGT TGTATATGTGGACAATCATTTTGTTGGCTGTGTGGTGGTGCCACTGGTAGAGACCATACA TGGACAAATATCACTGGTCACAGTTGTGGGCGATATAAAGAAGAGGATGTGAACAAATTG GAGCATGCAAAAAGGGAGCTCTCACGTTATGTTCACTATCATGATCGATACAAAGCTCAC ACGGATTCTTTTAAGCTTGAAATTAAGCTGAAGGAAACCATACAGGAAAATATATCAAAA CTGGAAGAAAGGGATTCAGCATTCAAAGATTTCAGTTGGCTTACAAGTGGACTTAACAGG CTCTTCAGGTCGAGGCGGGTTCTCTCATATTCCTACCCGTTTGCATTTTTCATGTTCGGT GACCTGTTCAATAATGAAATGACCGAGGCAGAAAAGGAAATAAAACAACACTTGTTTGAA GAACAACAGCAACAGCTTGAGGCAAATATTGAGAAGCTTTCATTATTCATAGAGGAGCCA TTTCATCAGTACACGGAGGACAAAGTTGCAGAAACAAGAATGAAAATTATGAATATGTCT GCAATCACTGATAACCTCTGCAAAAAGATGTATGAGTGCATTGAGAATGATTTGTTGGGT CCCCTCCAGCAGGCAATTCATATTATAGCTCCTTATAAATCAAAAGGTGTGGAGAAAGCG TCAGAACTTCCGCTTTGTTGGGGGCCCAATGCTGGTGATTCTAGCATAAATGTGGAAGCA AATTTGAAGATAAATAAGACCAAAACGTCTTTCAAGAGCTACTGA