Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g11700.t01
CDS Infomation

cds chromosome:12X:18:9960867:10008828:-1 gene:VIT_18s0001g11700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGAAATCCAGCGCTGATGACGAGGAGCTTAGGCGAGCTTGCGAGGCGGCCATCGAG
GGCACCAAGCAGAAGATCGTCATGTCGATCCGTGTTGCCAAGAGCCGCGGGATCTGGGGC
AAATCTGGCAAATTAGGTCGCAATATGGCCAAACCTAGGGTTCTTGCACTGTCAACAAAA
GCAAAGGCTCAGCGTACTAAAGCTTTTCTTCGTGTCTTAAAATATTCTACTGGAGGAGTT
CTTGAGCCTGCTAAATTGTACAAGTTAAAGCATCTCTCCAAGGTGGAAGTTATAGCTAAT
GATCCCAGTGGGTGTACGTTTATGCTGGGATTTGATAATCTCAGAAGCCAGAGTGTCGCT
CCACCTCAGTGGACAATGCGCAATATTGATGACAGGAATCGCCTGCTACTTTGCATCTTA
AATATCTGCAAAGATGTGTTGGGTCGTCTTCCCAAAGTTGTTGGTATTGATGTTGTAGAG
ATGGCTCTTTGGGCTAAGGAAAATAAACCTACAGTTACTGCTCAAGGGAATCTGCATGAT
GGGCCTATACCAGCTATGGTGACAGAAACCGACTTGAAAGTTTCTGTTGAAAGAGAACTT
GTAACCCAAGCTGAGGAGGATGATATGGAGGCTCTTCTTGGCAATTATGTCATGGGTATT
GGTGAAGCTGAGGCCTTTTCTGAAAGGTTGAAGAGAGAACTTCTTGCCTTGGAAGCAGCA
AATGTGCATGCCATTTTGGAATCTGAACCATTGGTCGATGAGGTACTGCAAGGCCTCGAG
ACAGCTACAAATTGTGTTGATGATATGGATGAATGGTTAGGCATTTTCAATGTGAAACTT
AGACACATGAGAGAGGATATTGAGTCGATAGAAACCCGCAATAACAAGTTGGAGATGCAA
TCTGTAAACAATAAAGCACTCATTGAGGAACTTGAAAAGCTTCTTGAACGATTGCGAGTC
CCTTCTGAGTATGCAGCATGTCTAACTGGAGGTCCCTTTGATGAGGCACGCATGCTGCAA
AACATTGAAGCATGTGAGTGGCTGACTGGTGCTCTGCGTGGTCTTGAAGTACCTAACTTG
GATCCTGCCTATGCAAACATACGAGCTGTTAAAGAAAAACGGGCAGAACTTGAAAAACTA
AAAACTACATTTGTTAGGAGAGCATCTGAATTCTTAAGAAACTACTTCGCCAGTTTGGTG
GATTTTATGATAAGTGATAAGAGTTACTTCTCTCAGCGAGGACAGTTGAAGAGGCCAGAC
CATGCTGATCTTCGGTATAAATGCAGGACTTATGCTCGCCTTCTACAACACTTAAAGAGT
CTTGATAAGAATTGCTTGGGTCCATTGAGAAAAGCCTATTGTAGCTCCCTTAACTTGCTT
CTTCGTCGAGAGGCTCGTGAGTTTGCAAATGAGCTTCGTGCTAGTACCAAAGCATCAAGA
AATCCAACTGTCTGGCTTGAAGCTTCTACAGGCTCTGGTCAAAATATGAACAACACGGAC
ACTTCAAATGTTTCGGATGCTTATGCGAAAATGCTGACAATTTTCATCCCACTTCTTGTA
GATGAGAGTTCTTTTTTTGCACACTTCATGTGCTTTGAGGTTCCTGCATTGGTTCCTCCG
GGGGGTCATGCCAATGGTAATAAAACGGGATCCAATGACGATGACGCCAATGATGATGAT
TTGGGTATTTTGGACATTGATGAAAATGACAACAAAACTGGCAAAAATTCTGCAGAGCTG
GGAGCATTAAATGAATCTCTTCAGGATTTGCTTGACGGTATCCAAGAAGACTTTTATGCA
GTGGTGGATTGGGCATACAAGATTGATCCTTTGCGCTGCATATCAATGCATGGGATTACA
GAACGGTATATTTCTGGTCAGAAAGCTGATGCAGCAGGATTTGTACGCCTCTTGCTTGAT
GATCTGGAGTCAAGAATTTCTATGCAGTTCGGCCGTTTTGTTGATGAAGCTTGTCACCAG
ATTGAAAGAAATGAACGTAACGTTCGGCAGACGGGTGTATTATCATATATTCCCAGATTT
GCAACTCTTGCAACCCGTATGGAGCAGTACATCCAGGGACAATCTAGAGATTTGGTTGAT
CAGGCATACACAAAATTTGTTACCATAATGTTTGTGACTTTGGAGAAAATTGCACAAACC
GACCCAAAATATGCTGATATTTTGCTTTTGGAGAATTTTGCAGCTTTCCAGAATAGTTTG
TATGACCTAGCCAATGTTGTTCCCACTTTAGCCAAATTCTATCACCAGGCCAGTGAATCT
TATGAACAAGCTTGCATGCGGCATATTAGCATGATCATATACATTCAATTCGAACGGCTT
TTCCAGTTTGCTCGAAGAGCTGAGGATTTGATGTTCACCATCTCACCAGAAGAGATCCCT
TTCCAGCTGGGATTGTCAAAAATGGATCTTCGGAAGATGTTGAAATCCAGTTTATCTGGG
GTTGACAAGTCCTTTAATGGAATGTATAAGAGATTGCAGAAGAATTTAACTTCAGAAGAA
CTTTTGCCATCTTTGTGGGATAAATGCAAGAAGGAGTTTCTGGACAAATATGATAGCTTC
GCACAACTGGTTGCCAAGATTTATCCTACCGAGACCATTCCATCTGTAGCAGAAATGAGA
GAAATTCTGGCCAACATGTAG

Peptide Sequence

PEP ID

VIT_18s0001g11700.t01
PEP Infomation

pep chromosome:12X:18:9960867:10008828:-1 gene:VIT_18s0001g11700 transcript:VIT_18s0001g11700.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAKSSADDEELRRACEAAIEGTKQKIVMSIRVAKSRGIWGKSGKLGRNMAKPRVLALSTK
AKAQRTKAFLRVLKYSTGGVLEPAKLYKLKHLSKVEVIANDPSGCTFMLGFDNLRSQSVA
PPQWTMRNIDDRNRLLLCILNICKDVLGRLPKVVGIDVVEMALWAKENKPTVTAQGNLHD
GPIPAMVTETDLKVSVERELVTQAEEDDMEALLGNYVMGIGEAEAFSERLKRELLALEAA
NVHAILESEPLVDEVLQGLETATNCVDDMDEWLGIFNVKLRHMREDIESIETRNNKLEMQ
SVNNKALIEELEKLLERLRVPSEYAACLTGGPFDEARMLQNIEACEWLTGALRGLEVPNL
DPAYANIRAVKEKRAELEKLKTTFVRRASEFLRNYFASLVDFMISDKSYFSQRGQLKRPD
HADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKASR
NPTVWLEASTGSGQNMNNTDTSNVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPALVPP
GGHANGNKTGSNDDDANDDDLGILDIDENDNKTGKNSAELGALNESLQDLLDGIQEDFYA
VVDWAYKIDPLRCISMHGITERYISGQKADAAGFVRLLLDDLESRISMQFGRFVDEACHQ
IERNERNVRQTGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVTIMFVTLEKIAQT
DPKYADILLLENFAAFQNSLYDLANVVPTLAKFYHQASESYEQACMRHISMIIYIQFERL
FQFARRAEDLMFTISPEEIPFQLGLSKMDLRKMLKSSLSGVDKSFNGMYKRLQKNLTSEE
LLPSLWDKCKKEFLDKYDSFAQLVAKIYPTETIPSVAEMREILANM

Transcript Sequence

Transcript ID

VIT_18s0001g11700.t01
Transcript Infomation

cdna chromosome:12X:18:9960867:10008828:-1 gene:VIT_18s0001g11700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TATAATTGGGTTCGGTGGGGATTGATTGAAGTGATCCGTTCCCGACCCGCCCGTTGCCAT
CCCTTCTCTCTGACACCTCCTACCTCAAAAGGTAGGCATTGCATCCTTGGGGCAGCAAGA
ATCGCGTAGATTGAATTAAGGTAGAACTCCAAAGATCAGAGTGTATCTAAATTGAAGAGC
TACTTCATTTGGGAGAAGTTACTAATTCGATTTCACCACCCCTGAATCTTGAGAGTACAA
ATCCATATTTAATTTAAGGAGCAGAGCACCGACTCGTCTCGTATCGAGGATCACATTGAC
GTTTCGGGGCTGATTGTGTAAGAGCGGAGACACAGTAATGGCGAAATCCAGCGCTGATGA
CGAGGAGCTTAGGCGAGCTTGCGAGGCGGCCATCGAGGGCACCAAGCAGAAGATCGTCAT
GTCGATCCGTGTTGCCAAGAGCCGCGGGATCTGGGGCAAATCTGGCAAATTAGGTCGCAA
TATGGCCAAACCTAGGGTTCTTGCACTGTCAACAAAAGCAAAGGCTCAGCGTACTAAAGC
TTTTCTTCGTGTCTTAAAATATTCTACTGGAGGAGTTCTTGAGCCTGCTAAATTGTACAA
GTTAAAGCATCTCTCCAAGGTGGAAGTTATAGCTAATGATCCCAGTGGGTGTACGTTTAT
GCTGGGATTTGATAATCTCAGAAGCCAGAGTGTCGCTCCACCTCAGTGGACAATGCGCAA
TATTGATGACAGGAATCGCCTGCTACTTTGCATCTTAAATATCTGCAAAGATGTGTTGGG
TCGTCTTCCCAAAGTTGTTGGTATTGATGTTGTAGAGATGGCTCTTTGGGCTAAGGAAAA
TAAACCTACAGTTACTGCTCAAGGGAATCTGCATGATGGGCCTATACCAGCTATGGTGAC
AGAAACCGACTTGAAAGTTTCTGTTGAAAGAGAACTTGTAACCCAAGCTGAGGAGGATGA
TATGGAGGCTCTTCTTGGCAATTATGTCATGGGTATTGGTGAAGCTGAGGCCTTTTCTGA
AAGGTTGAAGAGAGAACTTCTTGCCTTGGAAGCAGCAAATGTGCATGCCATTTTGGAATC
TGAACCATTGGTCGATGAGGTACTGCAAGGCCTCGAGACAGCTACAAATTGTGTTGATGA
TATGGATGAATGGTTAGGCATTTTCAATGTGAAACTTAGACACATGAGAGAGGATATTGA
GTCGATAGAAACCCGCAATAACAAGTTGGAGATGCAATCTGTAAACAATAAAGCACTCAT
TGAGGAACTTGAAAAGCTTCTTGAACGATTGCGAGTCCCTTCTGAGTATGCAGCATGTCT
AACTGGAGGTCCCTTTGATGAGGCACGCATGCTGCAAAACATTGAAGCATGTGAGTGGCT
GACTGGTGCTCTGCGTGGTCTTGAAGTACCTAACTTGGATCCTGCCTATGCAAACATACG
AGCTGTTAAAGAAAAACGGGCAGAACTTGAAAAACTAAAAACTACATTTGTTAGGAGAGC
ATCTGAATTCTTAAGAAACTACTTCGCCAGTTTGGTGGATTTTATGATAAGTGATAAGAG
TTACTTCTCTCAGCGAGGACAGTTGAAGAGGCCAGACCATGCTGATCTTCGGTATAAATG
CAGGACTTATGCTCGCCTTCTACAACACTTAAAGAGTCTTGATAAGAATTGCTTGGGTCC
ATTGAGAAAAGCCTATTGTAGCTCCCTTAACTTGCTTCTTCGTCGAGAGGCTCGTGAGTT
TGCAAATGAGCTTCGTGCTAGTACCAAAGCATCAAGAAATCCAACTGTCTGGCTTGAAGC
TTCTACAGGCTCTGGTCAAAATATGAACAACACGGACACTTCAAATGTTTCGGATGCTTA
TGCGAAAATGCTGACAATTTTCATCCCACTTCTTGTAGATGAGAGTTCTTTTTTTGCACA
CTTCATGTGCTTTGAGGTTCCTGCATTGGTTCCTCCGGGGGGTCATGCCAATGGTAATAA
AACGGGATCCAATGACGATGACGCCAATGATGATGATTTGGGTATTTTGGACATTGATGA
AAATGACAACAAAACTGGCAAAAATTCTGCAGAGCTGGGAGCATTAAATGAATCTCTTCA
GGATTTGCTTGACGGTATCCAAGAAGACTTTTATGCAGTGGTGGATTGGGCATACAAGAT
TGATCCTTTGCGCTGCATATCAATGCATGGGATTACAGAACGGTATATTTCTGGTCAGAA
AGCTGATGCAGCAGGATTTGTACGCCTCTTGCTTGATGATCTGGAGTCAAGAATTTCTAT
GCAGTTCGGCCGTTTTGTTGATGAAGCTTGTCACCAGATTGAAAGAAATGAACGTAACGT
TCGGCAGACGGGTGTATTATCATATATTCCCAGATTTGCAACTCTTGCAACCCGTATGGA
GCAGTACATCCAGGGACAATCTAGAGATTTGGTTGATCAGGCATACACAAAATTTGTTAC
CATAATGTTTGTGACTTTGGAGAAAATTGCACAAACCGACCCAAAATATGCTGATATTTT
GCTTTTGGAGAATTTTGCAGCTTTCCAGAATAGTTTGTATGACCTAGCCAATGTTGTTCC
CACTTTAGCCAAATTCTATCACCAGGCCAGTGAATCTTATGAACAAGCTTGCATGCGGCA
TATTAGCATGATCATATACATTCAATTCGAACGGCTTTTCCAGTTTGCTCGAAGAGCTGA
GGATTTGATGTTCACCATCTCACCAGAAGAGATCCCTTTCCAGCTGGGATTGTCAAAAAT
GGATCTTCGGAAGATGTTGAAATCCAGTTTATCTGGGGTTGACAAGTCCTTTAATGGAAT
GTATAAGAGATTGCAGAAGAATTTAACTTCAGAAGAACTTTTGCCATCTTTGTGGGATAA
ATGCAAGAAGGAGTTTCTGGACAAATATGATAGCTTCGCACAACTGGTTGCCAAGATTTA
TCCTACCGAGACCATTCCATCTGTAGCAGAAATGAGAGAAATTCTGGCCAACATGTAGAC
ATATCATTTTCTTGTATAGTCTTGAAAACTTCCTGTTTGAAGTAAAGATGTCTTTTATTG
TTCTCCCCCACCCATAGTTGTATCATTTTTCACGGGATAAATTATTGTTTGTTCTTGCAT
GTATTGCCGTGTTTGTTTCTCCTCCTTTTTGGTCGTTGAAAAGAAAATAGTCCCACAAGG
CTTTTGCTTGGTTTTTTTGAGGCTGCGGCGGTAAGAACACACAAAGATTGGGTTGGGTTT
TGTTTGTAGAAGTCATGTTGTCCCTCATCATCTAGTTAATTATCGTAGCATCAATTGTCC
TCCAGGAAGACACACCTATGGATGCTTAGATTATTTGTTATTTCTTTTATTTTTAAAAG