Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g11630.t01
CDS Infomation

cds chromosome:12X:18:9911196:9912972:-1 gene:VIT_18s0001g11630 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGTCCCCTTCTCTAACTTTCCCTTCCCTGCAACTACAATTCCCAACACACACAAAA
TCATCTAAGCCATCCAATCATAAGCTCATTGTTCGCCCGATATTTGCCTCTGTTTCTGAG
AAACCATCGGTACCGGTTTCTCAGTCTCAGGTGACGCCCCCCGGTCCAATCAGGAAAATT
CCCGGAGATTATGGTCTCCCTTTCATCGGTCCCATAAAAGATCGTCTTGATTATTTCTAT
AATCAAGGCAGAGAAGAGTTCTTCAGGTCCAGAGCCCAGAAACACCAGTCAACCGTGTTC
CGGTCCAACATGCCACCCGGCCCTTTCATCTCCTCCAACTCCAAAGTCATCGTTTTACTG
GATGGGAAGAGTTTTCCTGTACTCTTTGACGTTTCCAAAGTTGAAAAAAAGGACGTTTTC
ACCGGAACTTTCATGCCCTCCACCGAATTCACCGGCGGATTCAGAGTTCTTTCCTATCTC
GATCCATCCGAGCCCGATCACACCAAACTCAAGCGCCTCCTCTTCTTCCTCCTCCAGTCC
AGCCGCGACAGGGTCATCCCAGAGTTCCATTCCTGCTTCTCCGAGCTCTCCGAGACCCTT
GAAAGCGAACTCGCAGCAAAAGGCAAAGCCAGTTTCGCCGACCCTAACGATCAGGCATCC
TTCAACTTTCTTGCTCGCGCTCTCTACGGCACCAAGCCGGCTGATACCAAACTGGGTACT
GACGGGCCTGGCTTAATCACGACATGGGTTGTCTTCCAGTTGAGTCCCATCCTCACTCTA
GGCCTACCCAAGTTTATAGAAGAACCCCTTATCCACACTTTTCCACTCCCGGCATTTCTG
GCTAAATCAAGTTACCAGAAGCTCTATGACTTCTTCTACGACGCGTCAACTCATGTTCTG
GACGAAGGTGAGAAGATGGGGATATCAAGAGAGGAAGCTTGCCACAACCTCCTTTTCGCC
ACGTGCTTTAATTCCTTCGGAGGGATGAAAATCATCTTTCCAACAATTCTCAAATGGGTC
GGTCGAGGAGGAGTGAAACTGCACACCCAATTAGCCCAGGAGATTAGATCTGTCGTCAAA
TCCAACGGCGGAAAAGTGACCATGGCGTCCATGGAGCAGATGCCGCTGATGAAGTCTACT
GTATACGAAGCCTTCCGGATCGAACCCCCTGTCGCATTGCAGTACGGCAAGGCGAAGCAG
GATCTGGTGATCGAAAGCCACGACTCTGTTTTTGAAGTCAAAGAAGGTGAAATGTTGTTC
GGGTACCAACCGTTCGCCACCAAAGACCCGAAAATCTTCGAACGATCCGAAGAGTTCGTG
CCGGATCGGTTCGTGGGTGAGGGTGAGAAGCTGCTGAAGCACGTGCTCTGGTCAAACGGA
CCTGAAACCGAGAATCCAACCTTGGGGAATAAGCAGTGCGCAGGTAAAGACTTCGTGGTG
CTGGCCGCCAGGCTATTTGTGGTGGAGCTGTTCCTGCGTTACGATTCCTTTGACATCGAG
GTTGGCACGTCGCTGTTGGGTTCAGCCATCAATCTAACCTCCCTAAAGCGAGCCAGTTTT
TGA

Peptide Sequence

PEP ID

VIT_18s0001g11630.t01
PEP Infomation

pep chromosome:12X:18:9911196:9912972:-1 gene:VIT_18s0001g11630 transcript:VIT_18s0001g11630.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASPSLTFPSLQLQFPTHTKSSKPSNHKLIVRPIFASVSEKPSVPVSQSQVTPPGPIRKI
PGDYGLPFIGPIKDRLDYFYNQGREEFFRSRAQKHQSTVFRSNMPPGPFISSNSKVIVLL
DGKSFPVLFDVSKVEKKDVFTGTFMPSTEFTGGFRVLSYLDPSEPDHTKLKRLLFFLLQS
SRDRVIPEFHSCFSELSETLESELAAKGKASFADPNDQASFNFLARALYGTKPADTKLGT
DGPGLITTWVVFQLSPILTLGLPKFIEEPLIHTFPLPAFLAKSSYQKLYDFFYDASTHVL
DEGEKMGISREEACHNLLFATCFNSFGGMKIIFPTILKWVGRGGVKLHTQLAQEIRSVVK
SNGGKVTMASMEQMPLMKSTVYEAFRIEPPVALQYGKAKQDLVIESHDSVFEVKEGEMLF
GYQPFATKDPKIFERSEEFVPDRFVGEGEKLLKHVLWSNGPETENPTLGNKQCAGKDFVV
LAARLFVVELFLRYDSFDIEVGTSLLGSAINLTSLKRASF

Transcript Sequence

Transcript ID

VIT_18s0001g11630.t01
Transcript Infomation

cdna chromosome:12X:18:9911196:9912972:-1 gene:VIT_18s0001g11630 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTTGGAAAGTGTATCAAGGCCCAATAGCTTTTCTCCTCTCTCCATTCTATGCAAAAGCT
GACTGAAAGAGGGCTTTCAGTGGTTTAGTTTTAGACATGGCGTCCCCTTCTCTAACTTTC
CCTTCCCTGCAACTACAATTCCCAACACACACAAAATCATCTAAGCCATCCAATCATAAG
CTCATTGTTCGCCCGATATTTGCCTCTGTTTCTGAGAAACCATCGGTACCGGTTTCTCAG
TCTCAGGTGACGCCCCCCGGTCCAATCAGGAAAATTCCCGGAGATTATGGTCTCCCTTTC
ATCGGTCCCATAAAAGATCGTCTTGATTATTTCTATAATCAAGGCAGAGAAGAGTTCTTC
AGGTCCAGAGCCCAGAAACACCAGTCAACCGTGTTCCGGTCCAACATGCCACCCGGCCCT
TTCATCTCCTCCAACTCCAAAGTCATCGTTTTACTGGATGGGAAGAGTTTTCCTGTACTC
TTTGACGTTTCCAAAGTTGAAAAAAAGGACGTTTTCACCGGAACTTTCATGCCCTCCACC
GAATTCACCGGCGGATTCAGAGTTCTTTCCTATCTCGATCCATCCGAGCCCGATCACACC
AAACTCAAGCGCCTCCTCTTCTTCCTCCTCCAGTCCAGCCGCGACAGGGTCATCCCAGAG
TTCCATTCCTGCTTCTCCGAGCTCTCCGAGACCCTTGAAAGCGAACTCGCAGCAAAAGGC
AAAGCCAGTTTCGCCGACCCTAACGATCAGGCATCCTTCAACTTTCTTGCTCGCGCTCTC
TACGGCACCAAGCCGGCTGATACCAAACTGGGTACTGACGGGCCTGGCTTAATCACGACA
TGGGTTGTCTTCCAGTTGAGTCCCATCCTCACTCTAGGCCTACCCAAGTTTATAGAAGAA
CCCCTTATCCACACTTTTCCACTCCCGGCATTTCTGGCTAAATCAAGTTACCAGAAGCTC
TATGACTTCTTCTACGACGCGTCAACTCATGTTCTGGACGAAGGTGAGAAGATGGGGATA
TCAAGAGAGGAAGCTTGCCACAACCTCCTTTTCGCCACGTGCTTTAATTCCTTCGGAGGG
ATGAAAATCATCTTTCCAACAATTCTCAAATGGGTCGGTCGAGGAGGAGTGAAACTGCAC
ACCCAATTAGCCCAGGAGATTAGATCTGTCGTCAAATCCAACGGCGGAAAAGTGACCATG
GCGTCCATGGAGCAGATGCCGCTGATGAAGTCTACTGTATACGAAGCCTTCCGGATCGAA
CCCCCTGTCGCATTGCAGTACGGCAAGGCGAAGCAGGATCTGGTGATCGAAAGCCACGAC
TCTGTTTTTGAAGTCAAAGAAGGTGAAATGTTGTTCGGGTACCAACCGTTCGCCACCAAA
GACCCGAAAATCTTCGAACGATCCGAAGAGTTCGTGCCGGATCGGTTCGTGGGTGAGGGT
GAGAAGCTGCTGAAGCACGTGCTCTGGTCAAACGGACCTGAAACCGAGAATCCAACCTTG
GGGAATAAGCAGTGCGCAGGTAAAGACTTCGTGGTGCTGGCCGCCAGGCTATTTGTGGTG
GAGCTGTTCCTGCGTTACGATTCCTTTGACATCGAGGTTGGCACGTCGCTGTTGGGTTCA
GCCATCAATCTAACCTCCCTAAAGCGAGCCAGTTTTTGAGCAGAGCTCCGATGCCGTTGC
TATGTCTCACCGGCGCCACCGCCTTCGTGGATATGGGGGCTGATGTGAGGGGTGATTAGG
CATGAGATGGGTCCGAATGGGTCCGAGATGTATAATA