Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g11590.t01
CDS Infomation

cds chromosome:12X:18:9884669:9889963:1 gene:VIT_18s0001g11590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTTCCGGTGAAAGTTGAAGGTAATGTAAAGCAACAAGGCGCCGGTGCGGCAACGGAA
AAGGTTGTTGTGGCGGTTAGAGCAGAGAGAGTGATCTCCAAGACTGCATTAGCATGGGCT
CTGAGTCACGTCGTTCACGCCGGCGATTGCATAACGTTGCTCGCTGTTTTTGCCACGAAG
AAAACGGGTCGGAGATTATGGAACTTCCCAAGATTGACAGGGGATTGTGCGAACAGTCAC
CGGGAGAGATTACCGGATCGGATTTGTGAGATCTCCGAGTCTTGTTCTCAGATGGTTCTC
CAGTTCAACGACCAAGTCGAGGTTAGAGTGAGGATTAAGGTGGTATCAGGTACACCTGGC
GGTGCAGTGGCAGCTGAAGCAAAGAGCAATGGAGCCAACTGGGTCATACTGGACAAGAAA
CTGAAGCAAGAACTGAAGCATTGCATGGAGGAACTCCACTGCAACATTGTTGTGATGAAG
GGTTCTCAACCAAAAGTCCTTAGGCTGAATTTGGGAAGCTCAAATGAACTTCAAACACCT
TTCTTTTCTGCTTCTTCTTCACCAGACATGGAAAACAGAACACTGCAAGGTCACAAGATC
AAGCATTCTACTCCAGTGAGCAGCCCTGAAGATCCAAGTACTTCCTTTACTAGAACCACA
AGGGAAGGTTCATTATCAAGTTCTGATACATTGACTTCCCCTTTCCTTGTTTATGAACAA
AATCCTCTTTTTGAAGGACTGAATAAAGGAAAATACAGGCCAGTTTATGAAGATGATTCA
GATGAACCACCAACAGCACTTGACTGTGAAAGGCTTATCACTCTTTCAGCACCCCCAGCA
TCATCTGTGAAAAGTGACCATCAGAGTGTATTTTGGATTCCCCAAAACCACATCGTTGCT
GAGAAGGCCCCATTAAACAAAAACTCCAGAAGCACCCAAAAAATGAGATCTCCTTCCAGA
ACTCTACTCGACAAGTTTGTTGAGTTTGATAAAGATACGAGGATCAGAGGACCTGGGTCC
ATCCAAACCCGTCAAAGAGACTACAGTTTTGACTCAACCATCAGAGAGGCGGTCCCTTTA
GGCAGAACTTCCTCAAAACCACCTCCTTTGTGCTCACTATGCCAACACAAGGCTCCAGTT
TTTGGAAAACCTCCAAGGCAGTTTGCTTATGAAGAGCTACAAGAAGCTACAAACGGATTC
TCAGATGAAAATTTCTTGGCAGAAGGTGGGTTTGGTGTGGTTCATAGGGGGGTGCTGAGA
AATGGCCAGGTGGTTGCAGTGAAGCAGTTAAAGTATGCTGGGTCTCAAGGAGATGCAGAT
TTTTGCAGGGAAGTGAGGGTTTTAAGCTGTGCACAGCATAGGAATGTTGTGTTGCTTATT
GGATTTTGTATTGAAGGGAGAAAGAGAGTATTGGTTTATGAGTACATATGCAATGGCTCC
TTGGACTTCCATCTACATGGAAACAAGACAACCCCACTGGATTGGCAATCACGGCTGAAA
ATTGCAATTGGAACAGCACGAGGCCTACGATACCTTCATGAAGACTGTAGAGTGGGTTGC
ATAGTACACAGGGACATGCGACCTAATAATATCCTCCTAACCCATGACTTCGAGCCTCTG
GTTGCTGACTTCGGACTTGCTAGATGGCACTCTAACTGGGATATTAATACTGAGGAGAGA
CTGATTGGAACTTCTGGGTATCTTGCGCCAGAGTATTTGGATGGTGGAAAAATTACACAG
AAAGTTGACGTATATGCATTTGGAGTGGTATTATTAGAATTAATGACAGGACAGAGGGCC
AGAGACTTGCAATTTTACAGGGGACGGAATTTTTTACCTGAGTGGATCCACCCTCTCCCT
GCATTACAGCCAAGCCATATTTTAGCTAACAACTACCAACTTGTGGATCCATGCTTAGCC
TCTGATGAACTCCACGACTTCCCCTATCAACTACAGGCAATGGGCTGCGCTGCTTCCTTG
TGTCTACGTCAAGATCCTGAATCCAGACCAACCATGTCTAAGGTCCTTAGAGTACTAGAA
GGAGGTGATGCTGCAATTCCTCTGTGTTTGGACTTGAATTCAGTTGGAAGTAGAAGTGGC
CATATGCATGGTCTGAGCTCACAGACACAGCCTGAGTCAAGGATAAACCACTCTCGCAGG
CTTTCACATTGA

Peptide Sequence

PEP ID

VIT_18s0001g11590.t01
PEP Infomation

pep chromosome:12X:18:9884669:9889963:1 gene:VIT_18s0001g11590 transcript:VIT_18s0001g11590.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MFPVKVEGNVKQQGAGAATEKVVVAVRAERVISKTALAWALSHVVHAGDCITLLAVFATK
KTGRRLWNFPRLTGDCANSHRERLPDRICEISESCSQMVLQFNDQVEVRVRIKVVSGTPG
GAVAAEAKSNGANWVILDKKLKQELKHCMEELHCNIVVMKGSQPKVLRLNLGSSNELQTP
FFSASSSPDMENRTLQGHKIKHSTPVSSPEDPSTSFTRTTREGSLSSSDTLTSPFLVYEQ
NPLFEGLNKGKYRPVYEDDSDEPPTALDCERLITLSAPPASSVKSDHQSVFWIPQNHIVA
EKAPLNKNSRSTQKMRSPSRTLLDKFVEFDKDTRIRGPGSIQTRQRDYSFDSTIREAVPL
GRTSSKPPPLCSLCQHKAPVFGKPPRQFAYEELQEATNGFSDENFLAEGGFGVVHRGVLR
NGQVVAVKQLKYAGSQGDADFCREVRVLSCAQHRNVVLLIGFCIEGRKRVLVYEYICNGS
LDFHLHGNKTTPLDWQSRLKIAIGTARGLRYLHEDCRVGCIVHRDMRPNNILLTHDFEPL
VADFGLARWHSNWDINTEERLIGTSGYLAPEYLDGGKITQKVDVYAFGVVLLELMTGQRA
RDLQFYRGRNFLPEWIHPLPALQPSHILANNYQLVDPCLASDELHDFPYQLQAMGCAASL
CLRQDPESRPTMSKVLRVLEGGDAAIPLCLDLNSVGSRSGHMHGLSSQTQPESRINHSRR
LSH

Transcript Sequence

Transcript ID

VIT_18s0001g11590.t01
Transcript Infomation

cdna chromosome:12X:18:9884669:9889963:1 gene:VIT_18s0001g11590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAGATTTCAGTTCCAGAATTTGCCGGCAGCTGGAATCTGACTAAGCAATGTTTCCGGTGA
AAGTTGAAGGTAATGTAAAGCAACAAGGCGCCGGTGCGGCAACGGAAAAGGTTGTTGTGG
CGGTTAGAGCAGAGAGAGTGATCTCCAAGACTGCATTAGCATGGGCTCTGAGTCACGTCG
TTCACGCCGGCGATTGCATAACGTTGCTCGCTGTTTTTGCCACGAAGAAAACGGGTCGGA
GATTATGGAACTTCCCAAGATTGACAGGGGATTGTGCGAACAGTCACCGGGAGAGATTAC
CGGATCGGATTTGTGAGATCTCCGAGTCTTGTTCTCAGATGGTTCTCCAGTTCAACGACC
AAGTCGAGGTTAGAGTGAGGATTAAGGTGGTATCAGGTACACCTGGCGGTGCAGTGGCAG
CTGAAGCAAAGAGCAATGGAGCCAACTGGGTCATACTGGACAAGAAACTGAAGCAAGAAC
TGAAGCATTGCATGGAGGAACTCCACTGCAACATTGTTGTGATGAAGGGTTCTCAACCAA
AAGTCCTTAGGCTGAATTTGGGAAGCTCAAATGAACTTCAAACACCTTTCTTTTCTGCTT
CTTCTTCACCAGACATGGAAAACAGAACACTGCAAGGTCACAAGATCAAGCATTCTACTC
CAGTGAGCAGCCCTGAAGATCCAAGTACTTCCTTTACTAGAACCACAAGGGAAGGTTCAT
TATCAAGTTCTGATACATTGACTTCCCCTTTCCTTGTTTATGAACAAAATCCTCTTTTTG
AAGGACTGAATAAAGGAAAATACAGGCCAGTTTATGAAGATGATTCAGATGAACCACCAA
CAGCACTTGACTGTGAAAGGCTTATCACTCTTTCAGCACCCCCAGCATCATCTGTGAAAA
GTGACCATCAGAGTGTATTTTGGATTCCCCAAAACCACATCGTTGCTGAGAAGGCCCCAT
TAAACAAAAACTCCAGAAGCACCCAAAAAATGAGATCTCCTTCCAGAACTCTACTCGACA
AGTTTGTTGAGTTTGATAAAGATACGAGGATCAGAGGACCTGGGTCCATCCAAACCCGTC
AAAGAGACTACAGTTTTGACTCAACCATCAGAGAGGCGGTCCCTTTAGGCAGAACTTCCT
CAAAACCACCTCCTTTGTGCTCACTATGCCAACACAAGGCTCCAGTTTTTGGAAAACCTC
CAAGGCAGTTTGCTTATGAAGAGCTACAAGAAGCTACAAACGGATTCTCAGATGAAAATT
TCTTGGCAGAAGGTGGGTTTGGTGTGGTTCATAGGGGGGTGCTGAGAAATGGCCAGGTGG
TTGCAGTGAAGCAGTTAAAGTATGCTGGGTCTCAAGGAGATGCAGATTTTTGCAGGGAAG
TGAGGGTTTTAAGCTGTGCACAGCATAGGAATGTTGTGTTGCTTATTGGATTTTGTATTG
AAGGGAGAAAGAGAGTATTGGTTTATGAGTACATATGCAATGGCTCCTTGGACTTCCATC
TACATGGAAACAAGACAACCCCACTGGATTGGCAATCACGGCTGAAAATTGCAATTGGAA
CAGCACGAGGCCTACGATACCTTCATGAAGACTGTAGAGTGGGTTGCATAGTACACAGGG
ACATGCGACCTAATAATATCCTCCTAACCCATGACTTCGAGCCTCTGGTTGCTGACTTCG
GACTTGCTAGATGGCACTCTAACTGGGATATTAATACTGAGGAGAGACTGATTGGAACTT
CTGGGTATCTTGCGCCAGAGTATTTGGATGGTGGAAAAATTACACAGAAAGTTGACGTAT
ATGCATTTGGAGTGGTATTATTAGAATTAATGACAGGACAGAGGGCCAGAGACTTGCAAT
TTTACAGGGGACGGAATTTTTTACCTGAGTGGATCCACCCTCTCCCTGCATTACAGCCAA
GCCATATTTTAGCTAACAACTACCAACTTGTGGATCCATGCTTAGCCTCTGATGAACTCC
ACGACTTCCCCTATCAACTACAGGCAATGGGCTGCGCTGCTTCCTTGTGTCTACGTCAAG
ATCCTGAATCCAGACCAACCATGTCTAAGGTCCTTAGAGTACTAGAAGGAGGTGATGCTG
CAATTCCTCTGTGTTTGGACTTGAATTCAGTTGGAAGTAGAAGTGGCCATATGCATGGTC
TGAGCTCACAGACACAGCCTGAGTCAAGGATAAACCACTCTCGCAGGCTTTCACATTGAA
CATTAATTCTGCATTTGGTTGAGGGTGTTCTGTCATATATAGTCCATACTCCAGAAATAC
ATTGGCGAGTTGCTTGCATGATTGCAGTCTATCAATGGATCTTGAAGAGCTGCATCAGCA
CATGGATCATATTATCAAATCACATGATTTCTTTATAAAAAAAAAATTGATGTCTT