Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g11500.t01
CDS Infomation

cds chromosome:12X:18:9794743:9797055:1 gene:VIT_18s0001g11500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTATTTCCTTCTCCAATACCTAAACATCACCACGGTCGGAGTCTTTGCCACACTTTTC
CTTTCCTACTGTCTATTATTATGGAGGTCTAGAGCTGGTAACAAAAAAATAGCACCTGAA
GCTGCTGCTGCATGGCCCATAATCGGTCACCTACACCTGTTAGCTGGTGGTTCTCATCAG
CTTCCCCACATAACCTTGGGAAACATGGCCGACAAATATGGACCGGTCTTCACAATTCGG
ATTGGGTTGCATCGAGCTGTGGTGGTAAGTTCTTGGGAGATGGCTAAAGAATGCTCGACC
GCCAATGACCAGGTTTCATCCTCGCGTCCCGAACTTTTAGCCTCAAAACTTTTGGGCTAC
AACTACGCCATGTTTGGTTTCTCTCCATACGGTTCTTACTGGCGTGAAATGCGCAAGATA
ATCAGCCTAGAGCTACTCTCTAACAGCCGCTTAGAGCTGCTGAAGGACGTCCGAGCTTCA
GAAGTGGTGACATCCATAAAAGAGCTATACAAGCTCTGGGCAGAGAAAAAAAATGAATCG
GGCCTTGTCTCGGTGGAGATGAAGCAGTGGTTTGGAGACTTGACTCTGAACGTAATTCTT
AGGATGGTGGCAGGGAAGCGTTATTTCAGTGCTTCAGATGCAAGTGAAAATAAACAGGCG
CAGAGGTGCCGGAGAGTGTTCAGGGAATTCTTTCATTTGTCAGGGCTCTTTGTGGTGGCG
GACGCTATTCCATTTCTTGGATGGCTCGACTGGGGGAGACATGAGAAAACCCTAAAGAAG
ACAGCAATAGAAATGGACAGTATTGCTCAAGAATGGTTAGAGGAGCACCGTCGGAGGAAA
GACTCCGGTGATGATAATAGTACGCAAGACTTCATGGATGTGATGCAGTCAGTTCTTGAT
GGCAAAAACCTTGGTGGTTACGACGCTGATACCATCAATAAAGCCACATGCCTGACTCTA
ATCTCCGGAGGTAGCGACACAACTGTTGTCTCTCTAACATGGGCACTCTCTCTTGTACTA
AACAACCGTGACACCTTAAAAAAAGCTCAAGAAGAATTAGACATCCAAGTTGGTAAGGAA
AGATTAGTGAATGAACAAGATATAAGTAAGTTGGTCTATCTCCAAGCCATTGTTAAAGAG
ACATTACGGTTATATCCACCAGGACCACTTGGAGGACTACGCCAATTTACCGAGGATTGC
ACCTTGGGTGGATACCATGTCTCTAAAGGCACCCGTTTAATAATGAACCTTTCGAAGATC
CAAAAGGATCCAAGAATTTGGTCAGATCCGACAGAATTCCAACCAGAGAGGTTTCTCACC
ACCCATAAAGATGTTGATCCTCGGGGAAAACATTTTGAGTTTATACCATTTGGAGCTGGT
CGAAGAGCATGTCCAGGAATAACTTTTGGTCTTCAAGTATTACATTTAACATTGGCTAGT
TTCTTACATGCGTTTGAATTTTCAACTCCATCAAATGAACAGGTCAATATGCGCGAGAGC
CTTGGACTTACAAATATGAAATCTACCCCACTTGAAGTTCTCATTTCTCCACGCTTATCT
TCTTGTAGTCTTTACAATTAA

Peptide Sequence

PEP ID

VIT_18s0001g11500.t01
PEP Infomation

pep chromosome:12X:18:9794743:9797055:1 gene:VIT_18s0001g11500 transcript:VIT_18s0001g11500.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MYFLLQYLNITTVGVFATLFLSYCLLLWRSRAGNKKIAPEAAAAWPIIGHLHLLAGGSHQ
LPHITLGNMADKYGPVFTIRIGLHRAVVVSSWEMAKECSTANDQVSSSRPELLASKLLGY
NYAMFGFSPYGSYWREMRKIISLELLSNSRLELLKDVRASEVVTSIKELYKLWAEKKNES
GLVSVEMKQWFGDLTLNVILRMVAGKRYFSASDASENKQAQRCRRVFREFFHLSGLFVVA
DAIPFLGWLDWGRHEKTLKKTAIEMDSIAQEWLEEHRRRKDSGDDNSTQDFMDVMQSVLD
GKNLGGYDADTINKATCLTLISGGSDTTVVSLTWALSLVLNNRDTLKKAQEELDIQVGKE
RLVNEQDISKLVYLQAIVKETLRLYPPGPLGGLRQFTEDCTLGGYHVSKGTRLIMNLSKI
QKDPRIWSDPTEFQPERFLTTHKDVDPRGKHFEFIPFGAGRRACPGITFGLQVLHLTLAS
FLHAFEFSTPSNEQVNMRESLGLTNMKSTPLEVLISPRLSSCSLYN

Transcript Sequence

Transcript ID

VIT_18s0001g11500.t01
Transcript Infomation

cdna chromosome:12X:18:9794743:9797055:1 gene:VIT_18s0001g11500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTGAGCAGAAGAAACTAGCCATGTATTTCCTTCTCCAATACCTAAACATCACCACGGTCG
GAGTCTTTGCCACACTTTTCCTTTCCTACTGTCTATTATTATGGAGGTCTAGAGCTGGTA
ACAAAAAAATAGCACCTGAAGCTGCTGCTGCATGGCCCATAATCGGTCACCTACACCTGT
TAGCTGGTGGTTCTCATCAGCTTCCCCACATAACCTTGGGAAACATGGCCGACAAATATG
GACCGGTCTTCACAATTCGGATTGGGTTGCATCGAGCTGTGGTGGTAAGTTCTTGGGAGA
TGGCTAAAGAATGCTCGACCGCCAATGACCAGGTTTCATCCTCGCGTCCCGAACTTTTAG
CCTCAAAACTTTTGGGCTACAACTACGCCATGTTTGGTTTCTCTCCATACGGTTCTTACT
GGCGTGAAATGCGCAAGATAATCAGCCTAGAGCTACTCTCTAACAGCCGCTTAGAGCTGC
TGAAGGACGTCCGAGCTTCAGAAGTGGTGACATCCATAAAAGAGCTATACAAGCTCTGGG
CAGAGAAAAAAAATGAATCGGGCCTTGTCTCGGTGGAGATGAAGCAGTGGTTTGGAGACT
TGACTCTGAACGTAATTCTTAGGATGGTGGCAGGGAAGCGTTATTTCAGTGCTTCAGATG
CAAGTGAAAATAAACAGGCGCAGAGGTGCCGGAGAGTGTTCAGGGAATTCTTTCATTTGT
CAGGGCTCTTTGTGGTGGCGGACGCTATTCCATTTCTTGGATGGCTCGACTGGGGGAGAC
ATGAGAAAACCCTAAAGAAGACAGCAATAGAAATGGACAGTATTGCTCAAGAATGGTTAG
AGGAGCACCGTCGGAGGAAAGACTCCGGTGATGATAATAGTACGCAAGACTTCATGGATG
TGATGCAGTCAGTTCTTGATGGCAAAAACCTTGGTGGTTACGACGCTGATACCATCAATA
AAGCCACATGCCTGACTCTAATCTCCGGAGGTAGCGACACAACTGTTGTCTCTCTAACAT
GGGCACTCTCTCTTGTACTAAACAACCGTGACACCTTAAAAAAAGCTCAAGAAGAATTAG
ACATCCAAGTTGGTAAGGAAAGATTAGTGAATGAACAAGATATAAGTAAGTTGGTCTATC
TCCAAGCCATTGTTAAAGAGACATTACGGTTATATCCACCAGGACCACTTGGAGGACTAC
GCCAATTTACCGAGGATTGCACCTTGGGTGGATACCATGTCTCTAAAGGCACCCGTTTAA
TAATGAACCTTTCGAAGATCCAAAAGGATCCAAGAATTTGGTCAGATCCGACAGAATTCC
AACCAGAGAGGTTTCTCACCACCCATAAAGATGTTGATCCTCGGGGAAAACATTTTGAGT
TTATACCATTTGGAGCTGGTCGAAGAGCATGTCCAGGAATAACTTTTGGTCTTCAAGTAT
TACATTTAACATTGGCTAGTTTCTTACATGCGTTTGAATTTTCAACTCCATCAAATGAAC
AGGTCAATATGCGCGAGAGCCTTGGACTTACAAATATGAAATCTACCCCACTTGAAGTTC
TCATTTCTCCACGCTTATCTTCTTGTAGTCTTTACAATTAA