Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g11400.t01
CDS Infomation

cds chromosome:12X:18:9699734:9701502:1 gene:VIT_18s0001g11400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATCCTGCTCTACATTTGCCTGCATTTTTTGTGTTTCTTTCTTTAATCTATGTCTTC
TATGCAATGCTTGGAAGGAAAAAGATAATAAAAAGTAGTAAGAGCAGGGACGCTCCCGAA
CCAGGTGGTGCATGGCCAATTATTGGCCACCTCCATCTACTAGGAGGAGGTGATCAGCTT
CTTTACCGTACACTTGGAGCCATGGCTGATAAGTATGGTCCGGCATTCAATATCCGCCTC
GGCAGTCGCCGTGCTTTTGTGGTGAGTAGTTGGGAAGTAGCGAAGGAATGCTTCACCATT
AATGACAAAGCACTTGCTACGCGTCCCACTACAGTAGCCGCAAAGCACATGGGCTACAAC
TATGCGGTATTTGGTTTTGCACCCTACAGCCCTTTCTGGCGTGAGATGCGGAAGATTGCA
ACACTTGAACTTCTTTCAAATCGTCGGCTTGAGATTCTAAAGCATGTTCGAACTTCAGAA
GTTGACATGGGGATTAGGGAACTGTACGGTTTGTGGGTCAAAAACAGCTCCCGTCCATTG
CTTGTTGAACTTAATCGATGGTTGGAAGATATGACACTTAACGTGATTGTTAGAATGGTG
GCTGGAAAAAGATACTTTGGTGCTGCCGCTGCCTCCGACAGCAGTGAGGCAAGACGGTGC
CAGAAAGCAATTAGCCAATTCTTTCGTCTAATCGGCATTTTTGTGGTTTCAGATGCACTT
CCATTTCTATGGTGGCTGGATTTGCAGGGGCATGAGAGGGCAATGAAGACGACGGCCAAA
GAATTGGATTCCATACTTGAAGGCTGGCTTGAGGAGCATCGCCAAAGAAGAGTTTCTAGT
CTGATCAAGGCCGAGGGTGAGCAAGACTTCATTGACGTCATGTTGTCCCTTCAGGAGGAA
GGGCGCCTCTCTGGTTTTCAGTATGATTCCGAAACAAGCATCAAGTCCACTTGCCTGGCA
CTAATCCTAGGTGGCAGTGACACCACAGCAGGCACACTGACGTGGGCCATTTCTTTACTC
CTGAACAATCGCCACGCCTTGAAAAAGGCACAAGAAGAACTAGATCTGTGTGTTGGCATG
GAAAGGCAAGTGGAAGAGTCAGACGTTAAAAACCTTGTGTATCTTCAAGCAATCATCAAG
GAGACCCTTCGCCTCTACCCAGCAGGTCCCCTACTAGGACCCCGAGAGGCGTTGGACGAT
TGCACAGTCGCTGGCTACAATGTCCCTGCTGGCACTCGCTTAATAGTGAACATATGGAAG
CTTCAAAGGGATCCAAGTGTTTGGACAAATCCTTGTGCTTTCCAACCGGAGAGATTTCTC
AATGCTCATGCTGATGTTGATGTTAAAGGCCAACAATTTGAACTGATGCCTTTTGGGTCT
GGCAGAAGATCGTGCCCTGGAGTTTCATTTGCACTCCAAGTCCTGCACTTGACCCTCGCA
CGACTCCTTCATGCATTTGAATTGTCAACGCCAGTGGATCAGCCGGTCGACATGACTGAG
AGCTCGGGTTTAACCATTCCAAAAGCAACCCCATTAGAGGTCCTCTTGACTCCACGCCTG
AACTCCAAGCTCTATGCTTTTTAA

Peptide Sequence

PEP ID

VIT_18s0001g11400.t01
PEP Infomation

pep chromosome:12X:18:9699734:9701502:1 gene:VIT_18s0001g11400 transcript:VIT_18s0001g11400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDPALHLPAFFVFLSLIYVFYAMLGRKKIIKSSKSRDAPEPGGAWPIIGHLHLLGGGDQL
LYRTLGAMADKYGPAFNIRLGSRRAFVVSSWEVAKECFTINDKALATRPTTVAAKHMGYN
YAVFGFAPYSPFWREMRKIATLELLSNRRLEILKHVRTSEVDMGIRELYGLWVKNSSRPL
LVELNRWLEDMTLNVIVRMVAGKRYFGAAAASDSSEARRCQKAISQFFRLIGIFVVSDAL
PFLWWLDLQGHERAMKTTAKELDSILEGWLEEHRQRRVSSLIKAEGEQDFIDVMLSLQEE
GRLSGFQYDSETSIKSTCLALILGGSDTTAGTLTWAISLLLNNRHALKKAQEELDLCVGM
ERQVEESDVKNLVYLQAIIKETLRLYPAGPLLGPREALDDCTVAGYNVPAGTRLIVNIWK
LQRDPSVWTNPCAFQPERFLNAHADVDVKGQQFELMPFGSGRRSCPGVSFALQVLHLTLA
RLLHAFELSTPVDQPVDMTESSGLTIPKATPLEVLLTPRLNSKLYAF

Transcript Sequence

Transcript ID

VIT_18s0001g11400.t01
Transcript Infomation

cdna chromosome:12X:18:9699734:9701502:1 gene:VIT_18s0001g11400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATCCTGCTCTACATTTGCCTGCATTTTTTGTGTTTCTTTCTTTAATCTATGTCTTC
TATGCAATGCTTGGAAGGAAAAAGATAATAAAAAGTAGTAAGAGCAGGGACGCTCCCGAA
CCAGGTGGTGCATGGCCAATTATTGGCCACCTCCATCTACTAGGAGGAGGTGATCAGCTT
CTTTACCGTACACTTGGAGCCATGGCTGATAAGTATGGTCCGGCATTCAATATCCGCCTC
GGCAGTCGCCGTGCTTTTGTGGTGAGTAGTTGGGAAGTAGCGAAGGAATGCTTCACCATT
AATGACAAAGCACTTGCTACGCGTCCCACTACAGTAGCCGCAAAGCACATGGGCTACAAC
TATGCGGTATTTGGTTTTGCACCCTACAGCCCTTTCTGGCGTGAGATGCGGAAGATTGCA
ACACTTGAACTTCTTTCAAATCGTCGGCTTGAGATTCTAAAGCATGTTCGAACTTCAGAA
GTTGACATGGGGATTAGGGAACTGTACGGTTTGTGGGTCAAAAACAGCTCCCGTCCATTG
CTTGTTGAACTTAATCGATGGTTGGAAGATATGACACTTAACGTGATTGTTAGAATGGTG
GCTGGAAAAAGATACTTTGGTGCTGCCGCTGCCTCCGACAGCAGTGAGGCAAGACGGTGC
CAGAAAGCAATTAGCCAATTCTTTCGTCTAATCGGCATTTTTGTGGTTTCAGATGCACTT
CCATTTCTATGGTGGCTGGATTTGCAGGGGCATGAGAGGGCAATGAAGACGACGGCCAAA
GAATTGGATTCCATACTTGAAGGCTGGCTTGAGGAGCATCGCCAAAGAAGAGTTTCTAGT
CTGATCAAGGCCGAGGGTGAGCAAGACTTCATTGACGTCATGTTGTCCCTTCAGGAGGAA
GGGCGCCTCTCTGGTTTTCAGTATGATTCCGAAACAAGCATCAAGTCCACTTGCCTGGCA
CTAATCCTAGGTGGCAGTGACACCACAGCAGGCACACTGACGTGGGCCATTTCTTTACTC
CTGAACAATCGCCACGCCTTGAAAAAGGCACAAGAAGAACTAGATCTGTGTGTTGGCATG
GAAAGGCAAGTGGAAGAGTCAGACGTTAAAAACCTTGTGTATCTTCAAGCAATCATCAAG
GAGACCCTTCGCCTCTACCCAGCAGGTCCCCTACTAGGACCCCGAGAGGCGTTGGACGAT
TGCACAGTCGCTGGCTACAATGTCCCTGCTGGCACTCGCTTAATAGTGAACATATGGAAG
CTTCAAAGGGATCCAAGTGTTTGGACAAATCCTTGTGCTTTCCAACCGGAGAGATTTCTC
AATGCTCATGCTGATGTTGATGTTAAAGGCCAACAATTTGAACTGATGCCTTTTGGGTCT
GGCAGAAGATCGTGCCCTGGAGTTTCATTTGCACTCCAAGTCCTGCACTTGACCCTCGCA
CGACTCCTTCATGCATTTGAATTGTCAACGCCAGTGGATCAGCCGGTCGACATGACTGAG
AGCTCGGGTTTAACCATTCCAAAAGCAACCCCATTAGAGGTCCTCTTGACTCCACGCCTG
AACTCCAAGCTCTATGCTTTTTAA