Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g11270.t01
CDS Infomation

cds chromosome:12X:18:9581906:9589816:-1 gene:VIT_18s0001g11270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTTGAAGAGGAAAAGAAGAGCAATGTGCTTCACGTTCTCCGCTCTGGAGTGGGCC
ATTATTGGAACAAAGCCCAAAGAACTTTCCCAAAATGGTCCACCACACAAAATCCTAAAG
GCAAAGGGAAAAGCCCGAGGGGGCCCAAATCCTGATTACCTGCCAGGCAAGTTCAAAACA
AAGGTCGGTTTTGGTTCTTTTGCCTTTTTCCAACATAAAACTACGTCGTTTAGGTTTGCT
TACAACGTATCTTTCGGTTTCCTCGCGCTCTGTTGTGACGGAAGAATGGACCTCCGGCAG
TGCATCGGCAACCAAAACGACGTTGCTTTAGGCATCGCAAAGCACGTAGCCTTGACCGAA
AGCAAGGACTCGAACCTAGTTTTATCGCCGCTGTCGATTCATGTGGTTCTGAGCTTGGTA
GCAGCTGGCTCCAAGGGCGCAACGCTAGACCAGTTGCTCTCCTTTCTCAAATCCAAAGCC
TCCGGCGATCTCAACGCCTTCGCTTCTGAGCTGGTTTCCCTAGTCTTTGCCGATGGTAGT
CCTAGCGGTGGCCCTTGTTTGTCCTTCGCCAACGGTGTCTGGATCGATAAAACACTTCCT
CTTAAACCCTCTTTCAAACAGATCGTCGACACCGCTTATAAGGCTGCTGTTCATCAAGCT
GATTTCCGGATCAAGGCTGCTGAGGTAACCAGTGAAGCGAATTCATGGGCTGAAAAGGAG
ACCAATGGCCTTATCAAAGAAGTTCTTCCTCCTGGCTCAGTTGACTCTTCAACCAGGCTC
ATCTTTGCAAATGCTCTCTATTTTAAAGGGGCTTGGAATGAGAAGTTTGATGCATCAGCA
ACAAAAGATTATGACTTCCATCTTCTCAATGGGAGCTCGGTTCAAGTGCCCTTCATGACC
AGCAAGAAGAAGCAACTTATTAGCACCTTTGATGATTTCAAAGTCTTAGGGCTTTCTTAT
AAACAAGGTGGTGATAAGCGTAGTTTCTCCATGTATTTCTTTCTTCCAGATGCAAAGGAT
GGCCTGCAGGCTTTGATAGATAAAGTTGGTTCTGATTCTGCATTCTTAGATCGCCATCTT
CCATCTATGCCAGTTCCAGTGGGTGACTTTAGGATCCCAAGGTTCAAGATTTCTTTTGGG
TTTGAAGCTTCCAAAGTCTTAAAGGGACTAGGTCTGGTGCTGCCTTTTACTGAAGGTGGC
TTGACTGAGATGGTGGACTCCCCCATGGGGCAGGACCTATATGTCTCAAGCATTTTCCAT
AAATCCTTCATTGAAGTTAATGAGGAAGGCACAGAAGCTGCAGCTGCTTCTGTAGGTGTT
GTGAAACTGAGGGGCATGCTTAGTACTGATAATATAGATTTCATAGCTGATCACCCGTTC
CTGTTTGTGATCCGAGAAGACATGACTGGAGTTGTGCTGTTCATTGGGCATGTACTCAAT
CCTCTCGCAGTGCTAATAGCTCTAGCTTTACCCGTAAACTCCTGA

Peptide Sequence

PEP ID

VIT_18s0001g11270.t01
PEP Infomation

pep chromosome:12X:18:9581906:9589816:-1 gene:VIT_18s0001g11270 transcript:VIT_18s0001g11270.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDLKRKRRAMCFTFSALEWAIIGTKPKELSQNGPPHKILKAKGKARGGPNPDYLPGKFKT
KVGFGSFAFFQHKTTSFRFAYNVSFGFLALCCDGRMDLRQCIGNQNDVALGIAKHVALTE
SKDSNLVLSPLSIHVVLSLVAAGSKGATLDQLLSFLKSKASGDLNAFASELVSLVFADGS
PSGGPCLSFANGVWIDKTLPLKPSFKQIVDTAYKAAVHQADFRIKAAEVTSEANSWAEKE
TNGLIKEVLPPGSVDSSTRLIFANALYFKGAWNEKFDASATKDYDFHLLNGSSVQVPFMT
SKKKQLISTFDDFKVLGLSYKQGGDKRSFSMYFFLPDAKDGLQALIDKVGSDSAFLDRHL
PSMPVPVGDFRIPRFKISFGFEASKVLKGLGLVLPFTEGGLTEMVDSPMGQDLYVSSIFH
KSFIEVNEEGTEAAAASVGVVKLRGMLSTDNIDFIADHPFLFVIREDMTGVVLFIGHVLN
PLAVLIALALPVNS

Transcript Sequence

Transcript ID

VIT_18s0001g11270.t01
Transcript Infomation

cdna chromosome:12X:18:9581906:9589816:-1 gene:VIT_18s0001g11270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAATTTGCAGCTTGATTTTGGATGATCTGGGTATGGATTTGAAGAGGAAAAGAAGAGCA
ATGTGCTTCACGTTCTCCGCTCTGGAGTGGGCCATTATTGGAACAAAGCCCAAAGAACTT
TCCCAAAATGGTCCACCACACAAAATCCTAAAGGCAAAGGGAAAAGCCCGAGGGGGCCCA
AATCCTGATTACCTGCCAGGCAAGTTCAAAACAAAGGTCGGTTTTGGTTCTTTTGCCTTT
TTCCAACATAAAACTACGTCGTTTAGGTTTGCTTACAACGTATCTTTCGGTTTCCTCGCG
CTCTGTTGTGACGGAAGAATGGACCTCCGGCAGTGCATCGGCAACCAAAACGACGTTGCT
TTAGGCATCGCAAAGCACGTAGCCTTGACCGAAAGCAAGGACTCGAACCTAGTTTTATCG
CCGCTGTCGATTCATGTGGTTCTGAGCTTGGTAGCAGCTGGCTCCAAGGGCGCAACGCTA
GACCAGTTGCTCTCCTTTCTCAAATCCAAAGCCTCCGGCGATCTCAACGCCTTCGCTTCT
GAGCTGGTTTCCCTAGTCTTTGCCGATGGTAGTCCTAGCGGTGGCCCTTGTTTGTCCTTC
GCCAACGGTGTCTGGATCGATAAAACACTTCCTCTTAAACCCTCTTTCAAACAGATCGTC
GACACCGCTTATAAGGCTGCTGTTCATCAAGCTGATTTCCGGATCAAGGCTGCTGAGGTA
ACCAGTGAAGCGAATTCATGGGCTGAAAAGGAGACCAATGGCCTTATCAAAGAAGTTCTT
CCTCCTGGCTCAGTTGACTCTTCAACCAGGCTCATCTTTGCAAATGCTCTCTATTTTAAA
GGGGCTTGGAATGAGAAGTTTGATGCATCAGCAACAAAAGATTATGACTTCCATCTTCTC
AATGGGAGCTCGGTTCAAGTGCCCTTCATGACCAGCAAGAAGAAGCAACTTATTAGCACC
TTTGATGATTTCAAAGTCTTAGGGCTTTCTTATAAACAAGGTGGTGATAAGCGTAGTTTC
TCCATGTATTTCTTTCTTCCAGATGCAAAGGATGGCCTGCAGGCTTTGATAGATAAAGTT
GGTTCTGATTCTGCATTCTTAGATCGCCATCTTCCATCTATGCCAGTTCCAGTGGGTGAC
TTTAGGATCCCAAGGTTCAAGATTTCTTTTGGGTTTGAAGCTTCCAAAGTCTTAAAGGGA
CTAGGTCTGGTGCTGCCTTTTACTGAAGGTGGCTTGACTGAGATGGTGGACTCCCCCATG
GGGCAGGACCTATATGTCTCAAGCATTTTCCATAAATCCTTCATTGAAGTTAATGAGGAA
GGCACAGAAGCTGCAGCTGCTTCTGTAGGTGTTGTGAAACTGAGGGGCATGCTTAGTACT
GATAATATAGATTTCATAGCTGATCACCCGTTCCTGTTTGTGATCCGAGAAGACATGACT
GGAGTTGTGCTGTTCATTGGGCATGTACTCAATCCTCTCGCAGTGCTAATAGCTCTAGCT
TTACCCGTAAACTCCTGA