Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g11250.t01
CDS Infomation

cds chromosome:12X:18:9566593:9570177:1 gene:VIT_18s0001g11250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGTAACCGATTTATTCCCCGGTGAAATCGCCGCGGAGCTCCTGAAAATGCTAATA
TCTATATCAAGAGAATCGTTTATGTGTAAATCGAGCGCAGAACAAATGGTAACGTATATA
CAACAAGTCCTCCCCATAATCCAAGAAATACAGTACTCGGGCGTGGAATTGTCGGAGTTG
CGACAGTTTCAGATCGATCGCTTCGTGCATACTCTCCGCGAGGGCCAAGAGCTCGCCAAA
AAAGTCCAGGCTTGCGGCAGATGGAACGTGTACAGGAAGGTGCAGTTGGCGAGAAAGATG
GAGAAGCTAGAGAAGAACATCCTCAGGTTCTTGAATGGCCCCCTGCAGGCCCATATTCTG
GCCGACGTCCACCACATGCGGTTCGAGTCAGCAGAGAGGTTCGACCGGCTGGAATTTTCG
GCTCGGCGGCTCGAGGAGCAGCTTGGAGGCATGAAGATCGGGGTTGGTGGCGGAGGGTGG
TTGGCGGAGGCAGTGAAGCGAGGGGGGGAGGAGGAGGAGAGTTGCGAAGGTTTGACAAGT
ATGGGGGTTGGGATGGCTTTAGGGAAGAAGAAGGTGAAGGAAATGCTTATTGATAGAGAC
GATCTGCGGGTTGTTGGGATTCATGGGATTGGTGGCAGTGGCAAAACTACTGTTGCCAAG
GAGATTTGCAGAGATGGAGAAGTCCGAAGCTACTTTGATGACAGGATTCTGTTCCTGACT
GTGTCGCAGTCCCCAAACGTGGAGCAGTTGAGGTCTCATATTTGGGAATATGTTGAAGGG
AAGGACATGATTAATTCCCATGGTCCCATTCGACGATGGAAGTCACAATTTGAGAGGAGG
ATTGGAGTACGTACACTTGTGGTTCTGGATGATATCTGGTCACTCTCAGTGCTCGAGCTG
CTGATTTCCAGAATACCTGGATGCAAAACCCTTGTTGTTTCACGGTTCAAATTCCCAACC
ATCCTCAACCTCACCTATGAGCTGGAATTGCTGAGAGAAGATGAAGCTATCTCCTTGTTC
TGTCATGTTGCTTTTGGGCAGAAGTCCATACCTCTTTCTGCTAACGAGAATTTGGTCAAA
CAGGTTGTGCGCGAGTGTAAAGGGCTTCCTTTGGCTCTTAAAGTGATTGGAGCTTCACTT
AGAGACCGGCCCCAAATGTTTTGGGCAAGTGCAGCAAGCAGGCTATCACAAGCAGAACCC
ATTTGTGAGTCCCACGAAACGAAATTGCTTGAACGAATGGCAGTTGGTATTGCTGACCTG
CCAAAAATGGTTAGAGAATGTTTCTTGGACTTGGGAGCCTTTCCAGAGGATAAGAAGATT
CCTCTTGATGTTCTAATCAACATCTGGGTTGAGATCCATGATCTTTTTCAGGATGATGCT
TTTGCAGTTCTTTATGAGCTTGCAGAAAAGAATCTCCTTTCCCTGGTGAATGATGCAAGA
GCTGGGGACATATATAGCAGCTATTTTGAGATCTCTGCTTCTCAGCATGATGTTTTGAGA
GATCTTGCCCTTTACATGAGCAAGCGTGAGGGCATAAATGATCGAAGGCGTTTGCTTATG
CCAAGGAGGGAAACAAGACTTCCAAAAGAATGGGAGAGGAATATGGACCAGCCATTTAAT
GCCCAAATTGTTTCAATTCATACAGGTGAAATGGGAGAAACAGACTGGTTCCAGATGGAC
TTGCCCAAGGCCGAGGTTCTTATCCTCAACTTCTCCTCAAGTGAATACTTCTTACCTCCC
TTCATTGATCGGATGCCAAAGCTTCGAGCTTTAATATTAATCAATTACAGTACCTCAACG
GCAATTCTGAATAATGTAGAAGTATTTTCCAAATTAACTAACTTGAGGAGCCTCTGGTTT
GAGAAGATTTCTATCCCAGAGTTTCCCAAAGCTACTATCCCCATGAAAAGCTTGAAGAAA
ATATTTCTAGTTCTCTGCAAAATTGCCAACAGCCTTGATCAGTCTGTTGTAGACCTGCCC
CAGATGTTCCCTTGCCTCGCAGAGCTCACAATGGATCATTGCGATGATTTATGTGAGCTT
CCTTCAAGCATTTCAAGGATGCACTCGCTTGAATGCATGAGTATCACCAACTGCCACAGC
CTCCAAGAACTGCCAGCCGACCTGGGAAAACTGAATTCCCTACAAATTCTTAGGATTTAT
GATTGCCCAAGTCTGAAGACGCTTCCTCCTGGCCTATGTGAATTGAAGTGTTTGAAGTAT
CTTGACATTTCTCAGTGTGTTGGTCTGGAATGCCTTCCTGAAGGAATCGGTGGATTGTTA
AGGTTGGAAAAGATTGACATGAGGAAGTGCTCACGGATAAGAAATCTACCAAAATCTGCT
GCCTCATTGCAATTGCTGCGTCATGTGATTTGTGATGAAGAGATTTCTTGGTTGTGGAAA
GATGTGGAGACGGCTGTACCAGGTGTTCATGTGGAGTTTGCAAGGGAATGCTTTGATCTG
GACTGGCTGGTGGAGTGA

Peptide Sequence

PEP ID

VIT_18s0001g11250.t01
PEP Infomation

pep chromosome:12X:18:9566593:9570177:1 gene:VIT_18s0001g11250 transcript:VIT_18s0001g11250.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAVTDLFPGEIAAELLKMLISISRESFMCKSSAEQMVTYIQQVLPIIQEIQYSGVELSEL
RQFQIDRFVHTLREGQELAKKVQACGRWNVYRKVQLARKMEKLEKNILRFLNGPLQAHIL
ADVHHMRFESAERFDRLEFSARRLEEQLGGMKIGVGGGGWLAEAVKRGGEEEESCEGLTS
MGVGMALGKKKVKEMLIDRDDLRVVGIHGIGGSGKTTVAKEICRDGEVRSYFDDRILFLT
VSQSPNVEQLRSHIWEYVEGKDMINSHGPIRRWKSQFERRIGVRTLVVLDDIWSLSVLEL
LISRIPGCKTLVVSRFKFPTILNLTYELELLREDEAISLFCHVAFGQKSIPLSANENLVK
QVVRECKGLPLALKVIGASLRDRPQMFWASAASRLSQAEPICESHETKLLERMAVGIADL
PKMVRECFLDLGAFPEDKKIPLDVLINIWVEIHDLFQDDAFAVLYELAEKNLLSLVNDAR
AGDIYSSYFEISASQHDVLRDLALYMSKREGINDRRRLLMPRRETRLPKEWERNMDQPFN
AQIVSIHTGEMGETDWFQMDLPKAEVLILNFSSSEYFLPPFIDRMPKLRALILINYSTST
AILNNVEVFSKLTNLRSLWFEKISIPEFPKATIPMKSLKKIFLVLCKIANSLDQSVVDLP
QMFPCLAELTMDHCDDLCELPSSISRMHSLECMSITNCHSLQELPADLGKLNSLQILRIY
DCPSLKTLPPGLCELKCLKYLDISQCVGLECLPEGIGGLLRLEKIDMRKCSRIRNLPKSA
ASLQLLRHVICDEEISWLWKDVETAVPGVHVEFARECFDLDWLVE

Transcript Sequence

Transcript ID

VIT_18s0001g11250.t01
Transcript Infomation

cdna chromosome:12X:18:9566593:9570177:1 gene:VIT_18s0001g11250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGTTGCAGAGTGAAGCTGCGCCGGCCTACCGGCGACGGAATGGCAGTAACCGATTTATTC
CCCGGTGAAATCGCCGCGGAGCTCCTGAAAATGCTAATATCTATATCAAGAGAATCGTTT
ATGTGTAAATCGAGCGCAGAACAAATGGTAACGTATATACAACAAGTCCTCCCCATAATC
CAAGAAATACAGTACTCGGGCGTGGAATTGTCGGAGTTGCGACAGTTTCAGATCGATCGC
TTCGTGCATACTCTCCGCGAGGGCCAAGAGCTCGCCAAAAAAGTCCAGGCTTGCGGCAGA
TGGAACGTGTACAGGAAGGTGCAGTTGGCGAGAAAGATGGAGAAGCTAGAGAAGAACATC
CTCAGGTTCTTGAATGGCCCCCTGCAGGCCCATATTCTGGCCGACGTCCACCACATGCGG
TTCGAGTCAGCAGAGAGGTTCGACCGGCTGGAATTTTCGGCTCGGCGGCTCGAGGAGCAG
CTTGGAGGCATGAAGATCGGGGTTGGTGGCGGAGGGTGGTTGGCGGAGGCAGTGAAGCGA
GGGGGGGAGGAGGAGGAGAGTTGCGAAGGTTTGACAAGTATGGGGGTTGGGATGGCTTTA
GGGAAGAAGAAGGTGAAGGAAATGCTTATTGATAGAGACGATCTGCGGGTTGTTGGGATT
CATGGGATTGGTGGCAGTGGCAAAACTACTGTTGCCAAGGAGATTTGCAGAGATGGAGAA
GTCCGAAGCTACTTTGATGACAGGATTCTGTTCCTGACTGTGTCGCAGTCCCCAAACGTG
GAGCAGTTGAGGTCTCATATTTGGGAATATGTTGAAGGGAAGGACATGATTAATTCCCAT
GGTCCCATTCGACGATGGAAGTCACAATTTGAGAGGAGGATTGGAGTACGTACACTTGTG
GTTCTGGATGATATCTGGTCACTCTCAGTGCTCGAGCTGCTGATTTCCAGAATACCTGGA
TGCAAAACCCTTGTTGTTTCACGGTTCAAATTCCCAACCATCCTCAACCTCACCTATGAG
CTGGAATTGCTGAGAGAAGATGAAGCTATCTCCTTGTTCTGTCATGTTGCTTTTGGGCAG
AAGTCCATACCTCTTTCTGCTAACGAGAATTTGGTCAAACAGGTTGTGCGCGAGTGTAAA
GGGCTTCCTTTGGCTCTTAAAGTGATTGGAGCTTCACTTAGAGACCGGCCCCAAATGTTT
TGGGCAAGTGCAGCAAGCAGGCTATCACAAGCAGAACCCATTTGTGAGTCCCACGAAACG
AAATTGCTTGAACGAATGGCAGTTGGTATTGCTGACCTGCCAAAAATGGTTAGAGAATGT
TTCTTGGACTTGGGAGCCTTTCCAGAGGATAAGAAGATTCCTCTTGATGTTCTAATCAAC
ATCTGGGTTGAGATCCATGATCTTTTTCAGGATGATGCTTTTGCAGTTCTTTATGAGCTT
GCAGAAAAGAATCTCCTTTCCCTGGTGAATGATGCAAGAGCTGGGGACATATATAGCAGC
TATTTTGAGATCTCTGCTTCTCAGCATGATGTTTTGAGAGATCTTGCCCTTTACATGAGC
AAGCGTGAGGGCATAAATGATCGAAGGCGTTTGCTTATGCCAAGGAGGGAAACAAGACTT
CCAAAAGAATGGGAGAGGAATATGGACCAGCCATTTAATGCCCAAATTGTTTCAATTCAT
ACAGGTGAAATGGGAGAAACAGACTGGTTCCAGATGGACTTGCCCAAGGCCGAGGTTCTT
ATCCTCAACTTCTCCTCAAGTGAATACTTCTTACCTCCCTTCATTGATCGGATGCCAAAG
CTTCGAGCTTTAATATTAATCAATTACAGTACCTCAACGGCAATTCTGAATAATGTAGAA
GTATTTTCCAAATTAACTAACTTGAGGAGCCTCTGGTTTGAGAAGATTTCTATCCCAGAG
TTTCCCAAAGCTACTATCCCCATGAAAAGCTTGAAGAAAATATTTCTAGTTCTCTGCAAA
ATTGCCAACAGCCTTGATCAGTCTGTTGTAGACCTGCCCCAGATGTTCCCTTGCCTCGCA
GAGCTCACAATGGATCATTGCGATGATTTATGTGAGCTTCCTTCAAGCATTTCAAGGATG
CACTCGCTTGAATGCATGAGTATCACCAACTGCCACAGCCTCCAAGAACTGCCAGCCGAC
CTGGGAAAACTGAATTCCCTACAAATTCTTAGGATTTATGATTGCCCAAGTCTGAAGACG
CTTCCTCCTGGCCTATGTGAATTGAAGTGTTTGAAGTATCTTGACATTTCTCAGTGTGTT
GGTCTGGAATGCCTTCCTGAAGGAATCGGTGGATTGTTAAGGTTGGAAAAGATTGACATG
AGGAAGTGCTCACGGATAAGAAATCTACCAAAATCTGCTGCCTCATTGCAATTGCTGCGT
CATGTGATTTGTGATGAAGAGATTTCTTGGTTGTGGAAAGATGTGGAGACGGCTGTACCA
GGTGTTCATGTGGAGTTTGCAAGGGAATGCTTTGATCTGGACTGGCTGGTGGAGTGACCA
AGGTTTATGACTTGTATTTACTATTATTGTTGTCCTAAGCAAGAGTAAATATTTTCTTTC
ATCCAATGTAAATAATTTTCCTCTTGGAAATTTAAATGGAAAGGGGGGAGAGTTTAGTGA
TT