Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g11120.t01
CDS Infomation

cds chromosome:12X:18:9433362:9437840:1 gene:VIT_18s0001g11120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAACACCAGGGTCCGGACAAAGCTACAGAACATGAAAGCTCCTATGAAGCATGATAAG
GATAAGGTGGAAATGCAGGGCACCAGAGGAATGGATGCCAAGAGAGCAACCGCAAATAGA
CGAGGACCGAGCAGAGATAGAAAAATGGCCCTACAACAAGATGTTGATAAGCTAAAGAAG
AAGCTTAGACACGAAGAGAATGTCCACAGAGCTTTAGAGAGGGCCTTCAATAGACCTTTG
GGAGCTCTACCTCGCCTTCCTCCTTATCTCCCTCCTTGTACATTGGAGCTTCTTGCTGAA
GTAGCTATTCTGGAAGAGGAGGTTGTTCGCCTTGAGGAACAAGTTGTGCACTTTAGACAA
GGTTTGTATCAGGAAGCTGTTTACATTTCATCTTCCAAGAAGAACATGGAGAGTTTGGCA
GATTTATATAATCCTTATCTGATGAGAAACTCCAAAAAGGATCAAACAAAGTTTTTAGTT
CAAACTGTGGACAATTCAGCCACATCTGCAACCAGGGATGCGCCTTCTCCACCTGCTGAC
AGGCGGGGAAAAGAGAATCAATCATATGCTAATTCTACAAAGAACAACAAGCGAGACCCA
AATAATAAAGCCCAAAAAATATCAACTCCAGTGAAAAGACCTCCAATAGAGCATGGATCA
GCGGAGAAGCATCTAGACTCTCAGAAATTACAGCTAGAAAACAGAGTAGTAGACCAAGAA
AATGCAGAAACAAGAACTTCTCTCACTCCAGATGAAAGACTATCTGCAGATGATAAGCCA
AATAAAATTTCTGAGGATATTTTGAGGTGCCTATTTAGCATTTTCTTAAGAATGAGCACA
TTGAAGAGCAGGGGCACATCAGAAAATTTACCTTCCCTCCCATCATTAGCTTCTCATGGA
AGTGGTGAAGAGACAGAGCTACAGGATCCTTATGGCATTTGTTCAGAATTTGGAAAGAGA
GATATTGGTCCATATAAGCATTTGTTTTCGATTCAAGCTAGCTCAATCAATCTAAACCGG
ACGGCAAATTCTTTGTTTCTTGTTCATAGACTGAAGCGCCTCCTCGGGAAACTTGCCTCT
GTTAACTTACAGGGCCTAACCCATCAGGAGAAGCTTGCTTTCTGGATCAACACCTATAAT
TCCTGCATGATGAATGCATTCCTGGAACATGGAATACCAGGGAATCCAGAGATGGTTGTT
GAATTGATGAGGAAGGCAACAATAAATGTGGGGGGACACTTGCTAAACGCAATAACTATT
GAACATTTCATCCTGAGGCTGCCTTATCACATAAAATATACCTTTCCGAAGGGTGCGAAA
AACGATGAGATGACAGCAAGAAGCATCTATGGGTTGGAGTTATCTGAACCATTAGTGACA
TTTGCACTCTCCTGTGGAAGCTGGTCCTCCCCTGCTGTGAGAGTGTATACCGCATCTCAG
GTTGAGAATGAACTGGAAGTTGCAAAAAGAGAGTACTTACAGGCTGCTGTGGGAATCTCA
ACAACCAAGTTGTTTGCAATCCCAAAGCTGTTGGATTGGTATCTACTTGACTTTGCAAAG
GACTTTGAATCATTTCTTGATTGGATTTGCCTTCAGCTACCAAGTGAACTTGGCAAAGAA
GCAATCAAGTGCCTGGAAAGAGGAAACAGCGAGCCTCTTTCACAATTTGTCCAAGTTATC
CCATATGAGTTCAGTTTCAGGTATCTGCTGCACATAAAATAA

Peptide Sequence

PEP ID

VIT_18s0001g11120.t01
PEP Infomation

pep chromosome:12X:18:9433362:9437840:1 gene:VIT_18s0001g11120 transcript:VIT_18s0001g11120.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNTRVRTKLQNMKAPMKHDKDKVEMQGTRGMDAKRATANRRGPSRDRKMALQQDVDKLKK
KLRHEENVHRALERAFNRPLGALPRLPPYLPPCTLELLAEVAILEEEVVRLEEQVVHFRQ
GLYQEAVYISSSKKNMESLADLYNPYLMRNSKKDQTKFLVQTVDNSATSATRDAPSPPAD
RRGKENQSYANSTKNNKRDPNNKAQKISTPVKRPPIEHGSAEKHLDSQKLQLENRVVDQE
NAETRTSLTPDERLSADDKPNKISEDILRCLFSIFLRMSTLKSRGTSENLPSLPSLASHG
SGEETELQDPYGICSEFGKRDIGPYKHLFSIQASSINLNRTANSLFLVHRLKRLLGKLAS
VNLQGLTHQEKLAFWINTYNSCMMNAFLEHGIPGNPEMVVELMRKATINVGGHLLNAITI
EHFILRLPYHIKYTFPKGAKNDEMTARSIYGLELSEPLVTFALSCGSWSSPAVRVYTASQ
VENELEVAKREYLQAAVGISTTKLFAIPKLLDWYLLDFAKDFESFLDWICLQLPSELGKE
AIKCLERGNSEPLSQFVQVIPYEFSFRYLLHIK

Transcript Sequence

Transcript ID

VIT_18s0001g11120.t01
Transcript Infomation

cdna chromosome:12X:18:9433362:9437840:1 gene:VIT_18s0001g11120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGGGGTTAGTGAAATTTGCGTACGGCGCTAAAGTGCGCTAGATGCGCACAGCCTGTTTC
GCAAAGCGAACGAATTTAGCTTTCACAGAGACAGAGACAGAGGGCGGCAGAGGCGCACTC
CCCTCCCCCCCTCTCCATCTCTTCCATTCTTTCTTCTTCAGTGGTTGTTGTATATATGAT
AACAATTCGACTTGTGTGACGCTTCGAAAACTGGTTCATTTGTTGTATGTATTTTGTTGG
TTTACTTCATACGCAGCTCGACAGATGCAGGGAATGGATTGAAGAGTGTTTTTGTCTTCT
TGGATTGCGTTCAAGTTTCCCGCTTTGTGTTGGGATGAAAATTTTCTCAAGAGTTTGCTT
GTTTTTTATGCAATAAAGATGAACACCAGGGTCCGGACAAAGCTACAGAACATGAAAGCT
CCTATGAAGCATGATAAGGATAAGGTGGAAATGCAGGGCACCAGAGGAATGGATGCCAAG
AGAGCAACCGCAAATAGACGAGGACCGAGCAGAGATAGAAAAATGGCCCTACAACAAGAT
GTTGATAAGCTAAAGAAGAAGCTTAGACACGAAGAGAATGTCCACAGAGCTTTAGAGAGG
GCCTTCAATAGACCTTTGGGAGCTCTACCTCGCCTTCCTCCTTATCTCCCTCCTTGTACA
TTGGAGCTTCTTGCTGAAGTAGCTATTCTGGAAGAGGAGGTTGTTCGCCTTGAGGAACAA
GTTGTGCACTTTAGACAAGGTTTGTATCAGGAAGCTGTTTACATTTCATCTTCCAAGAAG
AACATGGAGAGTTTGGCAGATTTATATAATCCTTATCTGATGAGAAACTCCAAAAAGGAT
CAAACAAAGTTTTTAGTTCAAACTGTGGACAATTCAGCCACATCTGCAACCAGGGATGCG
CCTTCTCCACCTGCTGACAGGCGGGGAAAAGAGAATCAATCATATGCTAATTCTACAAAG
AACAACAAGCGAGACCCAAATAATAAAGCCCAAAAAATATCAACTCCAGTGAAAAGACCT
CCAATAGAGCATGGATCAGCGGAGAAGCATCTAGACTCTCAGAAATTACAGCTAGAAAAC
AGAGTAGTAGACCAAGAAAATGCAGAAACAAGAACTTCTCTCACTCCAGATGAAAGACTA
TCTGCAGATGATAAGCCAAATAAAATTTCTGAGGATATTTTGAGGTGCCTATTTAGCATT
TTCTTAAGAATGAGCACATTGAAGAGCAGGGGCACATCAGAAAATTTACCTTCCCTCCCA
TCATTAGCTTCTCATGGAAGTGGTGAAGAGACAGAGCTACAGGATCCTTATGGCATTTGT
TCAGAATTTGGAAAGAGAGATATTGGTCCATATAAGCATTTGTTTTCGATTCAAGCTAGC
TCAATCAATCTAAACCGGACGGCAAATTCTTTGTTTCTTGTTCATAGACTGAAGCGCCTC
CTCGGGAAACTTGCCTCTGTTAACTTACAGGGCCTAACCCATCAGGAGAAGCTTGCTTTC
TGGATCAACACCTATAATTCCTGCATGATGAATGCATTCCTGGAACATGGAATACCAGGG
AATCCAGAGATGGTTGTTGAATTGATGAGGAAGGCAACAATAAATGTGGGGGGACACTTG
CTAAACGCAATAACTATTGAACATTTCATCCTGAGGCTGCCTTATCACATAAAATATACC
TTTCCGAAGGGTGCGAAAAACGATGAGATGACAGCAAGAAGCATCTATGGGTTGGAGTTA
TCTGAACCATTAGTGACATTTGCACTCTCCTGTGGAAGCTGGTCCTCCCCTGCTGTGAGA
GTGTATACCGCATCTCAGGTTGAGAATGAACTGGAAGTTGCAAAAAGAGAGTACTTACAG
GCTGCTGTGGGAATCTCAACAACCAAGTTGTTTGCAATCCCAAAGCTGTTGGATTGGTAT
CTACTTGACTTTGCAAAGGACTTTGAATCATTTCTTGATTGGATTTGCCTTCAGCTACCA
AGTGAACTTGGCAAAGAAGCAATCAAGTGCCTGGAAAGAGGAAACAGCGAGCCTCTTTCA
CAATTTGTCCAAGTTATCCCATATGAGTTCAGTTTCAGGTATCTGCTGCACATAAAATAA
ATTTTGCTTCATTTATCTTTGTCCATTTCTAGGGCTATGCGCTTAATGGGATTTGTACAC
ACCTATAGAATACAGAGTAGAAGTGAAAGTATAGTCTGTTCTCCATTGTAAGTAGTTATG
TGAGAGGAGATTTTTCTTCCACAAGGGGCTTCTGGTGTCACTGTCTAGGAGTTTTACATG
AAAGAGGCGATTTCTC