Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g10540.t01
CDS Infomation

cds chromosome:12X:18:8866981:8871163:1 gene:VIT_18s0001g10540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGCGGGGCTCACAGTCGCGAAGATCTGGAGATCTCCGATTCCGAATCTGAAGAAGAA
GAAAACTACCAAGACGTTGTAGAAGAAGAAGAAAATGGAGAGAGATCTTCAGAGCGGAGA
ACCAAGACTCCCTCGTCGCTCGACGAAGTCGAAGCCAAGCTCAGAGCCCTTAAGCTCAAG
TACCCCTCTCAAAACCACCCAATTCTCCCTAACGCCGTCAAGCTCTATCTTTACATTGGG
GGAAACACACCCAAAGCCAAGTGGGTTACTTCAGAAAAACTCACTTCTTATTCCTTTCTC
AAGACTTGTGGAAATGGCGGCTCAGACGACGATGAGCAAGATGATGAAGAGGGAGGAGAA
TCTTGGTGGATTTTGAAGGTTGGTTCCAAGGTTCGAGCCAAGGTGGCCCTGGAAATGCAA
TTGAAGACTTTCGGGGACCAGTGTCGCGTTGATTTTGTGTCACAGGGTGTGTGGGCGATG
AAGTTCTTTAGTGAAGATGAGTACAGGAATTTTGTTGGTAAATTTCAGGATTGTTTGTTT
GAAAACACGTACGGATTTGAATCAACAGATGCCAACAAGCTTAAGGTTTATGGGAAGGAT
TTTATTGGGTGGGTGAAGCCAGAAGTGGCAGATGATTCCGTATGGGAAGATGCGGAGGAT
GGTTACTTGAAAAGCCCTGATCCGGCAACTCCTGCGAGAGCAAGTCAGGATTTGAGGGAA
GAGTTTGAGGAGGCTGCCAATGGAGGGGGGATACAAAGTTTGGCATTGGGTGCATTGGAC
AACAGTTTCTTGGTGAACGATTCTGGGATTCAGGTTGTAAAGAATTTCAGCCATGGGATT
CAGGGGAAAGGTGTATTTGTGAATTTTGATAATGGGAATCGTAGAGGTGGTTTTGGCTTG
GAGCATTCGACACCAAAAAAGGCTCTTCTTATGAGGGCTGAAACTAATATGCTCCTTATG
AGTCCCATGACTGAGGGGAAGCCCCACACAAGGGGGCTTCACCATCTTGATATTGAAACT
GGGAAGATTGTTACGGAGTGGAAGTTTGAGAAGGATGGGACTGATATTACCATGAGGGAT
ATTACAAATGACAGTAAGGGAGCCCAGATGGATCCTTCGGGATCCACATTTTTAGGATTA
GATGACAACAGGCTCTGTCGGTGGGATATGCGTGATAGAAATGGGATGGTTCAGAATCTA
TCAGATGCTAGTACCCCTGTATTGCATTGGACCCAAGGTCATCAGTTCTCTCGGGGTACC
AACTTTCAGTGCTTTGCAACAGCTGGGGATGGATCAATTGTTGTTGGGTCTATTGACGGG
AAGATCCGACTGTATTCAAACAACACTATGAGGCAGGCAAAAACTGCTTTTCCTGGCCTT
GGTTCACCTATCACTCATGTGGATGTTACATTTGACGGGAAGTGGATATTGGGCACAACA
GACACCTATTTGATCCTCATCAGCACTCTTTTCATTGACAAAGAAGGAAGGACAAAGACT
GGTTTTGCTGGGCGTATGGGGAATAGAATCTCAGCCCCAAGATTGTTGAAGCTCACTCCT
TTGGATTCGCATCTCGCTGGAGTAAACAATAAGTTCCGCGGTGCTCAGTTTTCGTGGGTC
ACAGAGAATGGGAAGCAGGAGCGCCACCTGGTTGCCACAGTAGGAAAGTTTAGTGTGATA
TGGAATTTTCAACAGGTGAAGAATGGCTCCCATGAGTGCTACCATAATCAGGAGGGCCTG
AAGAGCTGTTACTGCTACAAAATTGTTCTCAAAGATGACTCCATAGTTGATAGCCGCTTC
ATGCATGACAAATTTGCTGTCAGCGATTCTCCTGAGGCTCCACTTGTGGTTGCTACCCAC
ATGAAAGTGAGCTCCTTCAGTATATCCAGCAAGCGATGA

Peptide Sequence

PEP ID

VIT_18s0001g10540.t01
PEP Infomation

pep chromosome:12X:18:8866981:8871163:1 gene:VIT_18s0001g10540 transcript:VIT_18s0001g10540.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGGAHSREDLEISDSESEEEENYQDVVEEEENGERSSERRTKTPSSLDEVEAKLRALKLK
YPSQNHPILPNAVKLYLYIGGNTPKAKWVTSEKLTSYSFLKTCGNGGSDDDEQDDEEGGE
SWWILKVGSKVRAKVALEMQLKTFGDQCRVDFVSQGVWAMKFFSEDEYRNFVGKFQDCLF
ENTYGFESTDANKLKVYGKDFIGWVKPEVADDSVWEDAEDGYLKSPDPATPARASQDLRE
EFEEAANGGGIQSLALGALDNSFLVNDSGIQVVKNFSHGIQGKGVFVNFDNGNRRGGFGL
EHSTPKKALLMRAETNMLLMSPMTEGKPHTRGLHHLDIETGKIVTEWKFEKDGTDITMRD
ITNDSKGAQMDPSGSTFLGLDDNRLCRWDMRDRNGMVQNLSDASTPVLHWTQGHQFSRGT
NFQCFATAGDGSIVVGSIDGKIRLYSNNTMRQAKTAFPGLGSPITHVDVTFDGKWILGTT
DTYLILISTLFIDKEGRTKTGFAGRMGNRISAPRLLKLTPLDSHLAGVNNKFRGAQFSWV
TENGKQERHLVATVGKFSVIWNFQQVKNGSHECYHNQEGLKSCYCYKIVLKDDSIVDSRF
MHDKFAVSDSPEAPLVVATHMKVSSFSISSKR

Transcript Sequence

Transcript ID

VIT_18s0001g10540.t01
Transcript Infomation

cdna chromosome:12X:18:8866981:8871163:1 gene:VIT_18s0001g10540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGCGGGGCTCACAGTCGCGAAGATCTGGAGATCTCCGATTCCGAATCTGAAGAAGAA
GAAAACTACCAAGACGTTGTAGAAGAAGAAGAAAATGGAGAGAGATCTTCAGAGCGGAGA
ACCAAGACTCCCTCGTCGCTCGACGAAGTCGAAGCCAAGCTCAGAGCCCTTAAGCTCAAG
TACCCCTCTCAAAACCACCCAATTCTCCCTAACGCCGTCAAGCTCTATCTTTACATTGGG
GGAAACACACCCAAAGCCAAGTGGGTTACTTCAGAAAAACTCACTTCTTATTCCTTTCTC
AAGACTTGTGGAAATGGCGGCTCAGACGACGATGAGCAAGATGATGAAGAGGGAGGAGAA
TCTTGGTGGATTTTGAAGGTTGGTTCCAAGGTTCGAGCCAAGGTGGCCCTGGAAATGCAA
TTGAAGACTTTCGGGGACCAGTGTCGCGTTGATTTTGTGTCACAGGGTGTGTGGGCGATG
AAGTTCTTTAGTGAAGATGAGTACAGGAATTTTGTTGGTAAATTTCAGGATTGTTTGTTT
GAAAACACGTACGGATTTGAATCAACAGATGCCAACAAGCTTAAGGTTTATGGGAAGGAT
TTTATTGGGTGGGTGAAGCCAGAAGTGGCAGATGATTCCGTATGGGAAGATGCGGAGGAT
GGTTACTTGAAAAGCCCTGATCCGGCAACTCCTGCGAGAGCAAGTCAGGATTTGAGGGAA
GAGTTTGAGGAGGCTGCCAATGGAGGGGGGATACAAAGTTTGGCATTGGGTGCATTGGAC
AACAGTTTCTTGGTGAACGATTCTGGGATTCAGGTTGTAAAGAATTTCAGCCATGGGATT
CAGGGGAAAGGTGTATTTGTGAATTTTGATAATGGGAATCGTAGAGGTGGTTTTGGCTTG
GAGCATTCGACACCAAAAAAGGCTCTTCTTATGAGGGCTGAAACTAATATGCTCCTTATG
AGTCCCATGACTGAGGGGAAGCCCCACACAAGGGGGCTTCACCATCTTGATATTGAAACT
GGGAAGATTGTTACGGAGTGGAAGTTTGAGAAGGATGGGACTGATATTACCATGAGGGAT
ATTACAAATGACAGTAAGGGAGCCCAGATGGATCCTTCGGGATCCACATTTTTAGGATTA
GATGACAACAGGCTCTGTCGGTGGGATATGCGTGATAGAAATGGGATGGTTCAGAATCTA
TCAGATGCTAGTACCCCTGTATTGCATTGGACCCAAGGTCATCAGTTCTCTCGGGGTACC
AACTTTCAGTGCTTTGCAACAGCTGGGGATGGATCAATTGTTGTTGGGTCTATTGACGGG
AAGATCCGACTGTATTCAAACAACACTATGAGGCAGGCAAAAACTGCTTTTCCTGGCCTT
GGTTCACCTATCACTCATGTGGATGTTACATTTGACGGGAAGTGGATATTGGGCACAACA
GACACCTATTTGATCCTCATCAGCACTCTTTTCATTGACAAAGAAGGAAGGACAAAGACT
GGTTTTGCTGGGCGTATGGGGAATAGAATCTCAGCCCCAAGATTGTTGAAGCTCACTCCT
TTGGATTCGCATCTCGCTGGAGTAAACAATAAGTTCCGCGGTGCTCAGTTTTCGTGGGTC
ACAGAGAATGGGAAGCAGGAGCGCCACCTGGTTGCCACAGTAGGAAAGTTTAGTGTGATA
TGGAATTTTCAACAGGTGAAGAATGGCTCCCATGAGTGCTACCATAATCAGGAGGGCCTG
AAGAGCTGTTACTGCTACAAAATTGTTCTCAAAGATGACTCCATAGTTGATAGCCGCTTC
ATGCATGACAAATTTGCTGTCAGCGATTCTCCTGAGGCTCCACTTGTGGTTGCTACCCAC
ATGAAAGTGAGCTCCTTCAGTATATCCAGCAAGCGATGACATTC