Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g10380.t01
CDS Infomation

cds chromosome:12X:18:8708588:8710123:1 gene:VIT_18s0001g10380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCTTATGCTGGACAATTGCGAAGGCATCTTACTCTCTTTAGATTCCCACAAATCT
GTGCCAGCGCCCTTTCTCACCAAGACCTACCAACTGGTGGACGACCCAGCCACTGATCAC
ATCGTCTCTTGGGGTGAAGACGACACTACCTTCGTGGTGTGGCGTCCTCCTGAGTTCGCT
CGCGATCTCCTTCCCAATTACTTCAAACACAACAACTTCTCAAGCTTCGTCAGACAGCTC
AACACCTATGGTTTTAGAAAGATTGTACCGGATAGATGGGAGTTTGCCAACGAGTTCTTC
AAGAAAGGAGAGAAGCACTTACTCTGCGAGATCCATAGAAGAAAAACCTCACAACCTCAA
GTGCCCATGAACCATCACCACCATCACCATTCTCCACTTGGTGTCAATGCTGGACCTGGC
TTCTTTCCCTTCCCTGGCCGAGTAAGCATTTCTCCGCCTGACTCCGACGACCAAGCCAAT
TGGTGTGATTCCCCGACTCTCTCCTCCCCAACAGCAGCAACTGGAGTTTCGGTCGTTAGT
GGTGGCTATAACAGCTCCGTCACGGCGTTGTCTGAGGATAATGAGAGACTCCGGCGAAGT
AACTCCATTCTCATGTCTGAGCTAGCTCACATGAGAAAGCTTTACAATGACATTATCTAC
TTTGTGCAAAACCATGTGAAGCCTGTTGCTCCCAGTAATTCCTACCCATCTTCTTTAGTT
ATCTGTAACCCACCCTCTTCTGCTACTACCGCTGCTGCTACTATTACTTGCAGCAGTACT
GCAATGGTGCAAAAGCCTCTGAACCAGTTACTTGGCTGTTATCAGTCCAACCCTAAGCAA
GCTCCTCGGAATCATGGTATGGGTTCCTTCAACTCTAGTACTACTACATCGTCAAAGAGC
TCTTTAACCGTGTTGGAAGAAACCAACGGCAGTAGCTGTCGAACTAAGCTGTTTGGTGTG
CCTCTTCAATCCAAGAAGAGATTGCACCCAGAGTATGCTTCTACTACTACGAGCATGGAG
ACTAACAAGGCTCGATTGGTTTTGGATAAGGATGATTTAGGGTTGAATCTCATGCCTCCT
TCTCCTTGTTAG

Peptide Sequence

PEP ID

VIT_18s0001g10380.t01
PEP Infomation

pep chromosome:12X:18:8708588:8710123:1 gene:VIT_18s0001g10380 transcript:VIT_18s0001g10380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALMLDNCEGILLSLDSHKSVPAPFLTKTYQLVDDPATDHIVSWGEDDTTFVVWRPPEFA
RDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTSQPQ
VPMNHHHHHHSPLGVNAGPGFFPFPGRVSISPPDSDDQANWCDSPTLSSPTAATGVSVVS
GGYNSSVTALSEDNERLRRSNSILMSELAHMRKLYNDIIYFVQNHVKPVAPSNSYPSSLV
ICNPPSSATTAAATITCSSTAMVQKPLNQLLGCYQSNPKQAPRNHGMGSFNSSTTTSSKS
SLTVLEETNGSSCRTKLFGVPLQSKKRLHPEYASTTTSMETNKARLVLDKDDLGLNLMPP
SPC

Transcript Sequence

Transcript ID

VIT_18s0001g10380.t01
Transcript Infomation

cdna chromosome:12X:18:8708588:8710123:1 gene:VIT_18s0001g10380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTCTTTCTTCGTTCAATGGCTCTTATGCTGGACAATTGCGAAGGCATCTTACTCTCTTT
AGATTCCCACAAATCTGTGCCAGCGCCCTTTCTCACCAAGACCTACCAACTGGTGGACGA
CCCAGCCACTGATCACATCGTCTCTTGGGGTGAAGACGACACTACCTTCGTGGTGTGGCG
TCCTCCTGAGTTCGCTCGCGATCTCCTTCCCAATTACTTCAAACACAACAACTTCTCAAG
CTTCGTCAGACAGCTCAACACCTATGGTTTTAGAAAGATTGTACCGGATAGATGGGAGTT
TGCCAACGAGTTCTTCAAGAAAGGAGAGAAGCACTTACTCTGCGAGATCCATAGAAGAAA
AACCTCACAACCTCAAGTGCCCATGAACCATCACCACCATCACCATTCTCCACTTGGTGT
CAATGCTGGACCTGGCTTCTTTCCCTTCCCTGGCCGAGTAAGCATTTCTCCGCCTGACTC
CGACGACCAAGCCAATTGGTGTGATTCCCCGACTCTCTCCTCCCCAACAGCAGCAACTGG
AGTTTCGGTCGTTAGTGGTGGCTATAACAGCTCCGTCACGGCGTTGTCTGAGGATAATGA
GAGACTCCGGCGAAGTAACTCCATTCTCATGTCTGAGCTAGCTCACATGAGAAAGCTTTA
CAATGACATTATCTACTTTGTGCAAAACCATGTGAAGCCTGTTGCTCCCAGTAATTCCTA
CCCATCTTCTTTAGTTATCTGTAACCCACCCTCTTCTGCTACTACCGCTGCTGCTACTAT
TACTTGCAGCAGTACTGCAATGGTGCAAAAGCCTCTGAACCAGTTACTTGGCTGTTATCA
GTCCAACCCTAAGCAAGCTCCTCGGAATCATGGTATGGGTTCCTTCAACTCTAGTACTAC
TACATCGTCAAAGAGCTCTTTAACCGTGTTGGAAGAAACCAACGGCAGTAGCTGTCGAAC
TAAGCTGTTTGGTGTGCCTCTTCAATCCAAGAAGAGATTGCACCCAGAGTATGCTTCTAC
TACTACGAGCATGGAGACTAACAAGGCTCGATTGGTTTTGGATAAGGATGATTTAGGGTT
GAATCTCATGCCTCCTTCTCCTTGTTAGCTTCCTCACATCCATTGAAGGATCTAAAAGTA
TCTTTTGTTTTTCTTTTTCACTATTTTTGTTTCTAATTTATTTTTTATTTTCATGTTTGA
TTGTCTTCTTCTTCTCTGGGTCTTGACTCTTGAGAGTCTGATATTGTTGATGAAATGTGT
GTGTGTGTGTGTGTGCGTGCGTGTGGGTGTTTGTGACAGTGTATATAAACTTTAGTACCG
GTATTATCTGGTTCCCCCAGCCATGAATGCAGGTGGGTTTTGGTTAGAGTGAAGATCAAA
GCAAGTTTAAATC