Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g10350.t01
CDS Infomation

cds chromosome:12X:18:8674915:8677295:1 gene:VIT_18s0001g10350 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTACCCATATTCCTTTGTATGTGTGGCTCCTCCTTATCCCTATCTCACACCTCGTT
TCCACGTTGGCACAGTCGGACACTTACATTGTCCACATGGACCTATCAGCCATGCCTAAA
GCTTTCTCCGGCCATCATAGCTGGTACATGGCTACCCTTGCGTCTGTGTCAGATAATACC
GCTGCCACTGCTAACCCTTACTCCTCTTCCTACTCTTCTAAACTTATATACAGCTATACT
AATGTAATCCATGGTTTTAGTGCAATCCTTTCCCCTTCGGAGCTTGAGGCCCTGAAAAGC
TTCCCGGGCTATATTTCTTCATTTCCAGATCTTCCTGTTAAAGCTGATACAACTCATTCT
GCTAAATTTCTTGGCCTGAATTCCAACTCCGGAGCGTGGCCCATGTCAAACTATGGCAAA
GATGTCATAATCGGGTTGGTGGACACTGGAATTTGGCCAGAGAGTGAAAGCTTTAACGAT
GATGGAATGACCGAAATTCCATCTAGATGGAAAGGAGCATGCGAGAGCGGCACCCAGTTC
AATTCTTCAATGTGCAACAAGAAGCTGATTGGAGCTCGGTTCTTCAACAAAGGTCTAATT
GCCAAACATCCCAATGTGTCCATCTCAATGAATTCAACCCGTGACACCGATGGCCATGGG
ACCCATACGTCAACAACAGCAGCTGGAAATTATGTAGAGGGTGCGTCGTACTTCGGCTAT
GGCTCAGGAACTGCTAGCGGCATGGCTCCCCGAGCTCGTGTGGCCATGTACAAGGCCCTG
TGGGACGTGGGTGCCGTCGCATCTGATATTATTGCTGCAATTGATCAGGCAATCATAGAT
GGGGTTGACGTCATGTCCTTGTCACTGGGCTTAGACGGGGTTCTGTTGTATGAAGATCCC
ATTGCCATAGCCACATTTGCAGCCTTGGAGAAGGATATCTTCGTAGCTACGTCAGCAGGA
AACGAGGGGCCTTTTCTTGGAACCTTACACAACGGAATTCCTTGGGTTCTAACTGTTGCT
GCCAGCACCATGGACCGCCAATTCAGCGGGATTGTGACCCTCGGGAATGGAGTTTCAGTC
ATCGGTTCCTCTCTCTATCCTGCAAATTCATCTTTCAGCCAAATCCCAATTGTTTTCATG
GGTTCATGCGAGGATTTGACGGAATTGAAGAAAGTTGGCTTTAAGATTGTTGTGTGCCAG
GACCAGAATGACTCCTTAAGCATCCAAGTTGATAATGCCAACACTGCGAGAGTGGCGGGA
GGAGTCTTCATAACAGATTACCCCGACATAGAATTCTTCATGCAAAGCTCTTTTCCAGCC
ACTTTTGTCAACCCTGAAAACGGAAAAGTTGTTATGGACTACATAAAGACTAGCTCTGAG
CCAAAAGCAAGTATAGAATTTTCAAAAACAATTCTTGGTGCCAAACGCGCACCAAGAATG
GCTACCTACAGCTCCAGAGGGCCGTCTCCAAGCTGCCCAGTGGTCTTGAAGCCCGACCTT
ACTGCCCCCGGCGCATTAATCTTGGCGTCATGGCCAAAAATTAACCCAGTGGCTGATGTG
AATTCGCGGTTACTTTATAGTGAATTCAATCTATTGTCGGGGACATCTATGGCGTGCCCC
CATGCAGCAGGAGTAGGGGCACTTCTGAAGGGTGCACACCCTGAATGGAGCCCCGCAGCC
ATCCGGTCAGCCATGATGACCACTTCTGATTCACTGGATAATACACTCAACCCCATCAAA
GGCATTGGCGACGATAACCAACCAGCCAGTCCCCTAGCCATGGGATCTGGCCATATCAAT
CCCAACAAGGCTCTTGACCCAGGATTCATCTATGACGTGAATCTTGAAGACCATATAAAT
CTCCTCTGTGCATTGAATTACTCCACCAAGCAAATCCAAATTATCACAAGGTCATCTTCC
TACACTTGCTCCGACCCCTCCTTGGATCTCAACTACCCGTCTTTCATTGCCTCCTTTGAT
GCAAATGATTCCAGATCAGATTCTAAAACCGTGCAAGAATTTAGAAGAACAGTGACTAAC
GTCGGGGAAGCAATGTCGACTTACAACGCTAAGCTGACAGGCATGGACGGATTTCAGGTG
AGCGTGGTGCCTGACAAATTGGTTTTCAAAGACAAGTACCAGAAGCTAAGCTACAAGCTG
AGGATAGAAGGCCCCAGTCTGATGAAAGAGACGGTAGCCTTCGGTTCACTGAGCTGGGTG
GATGTTGAAGCTAAACATGTGGTCAGAAGCCCCATAGTGGCCACAAGGCTGAGCTTAGTA
GCTCTGTGA

Peptide Sequence

PEP ID

VIT_18s0001g10350.t01
PEP Infomation

pep chromosome:12X:18:8674915:8677295:1 gene:VIT_18s0001g10350 transcript:VIT_18s0001g10350.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATHIPLYVWLLLIPISHLVSTLAQSDTYIVHMDLSAMPKAFSGHHSWYMATLASVSDNT
AATANPYSSSYSSKLIYSYTNVIHGFSAILSPSELEALKSFPGYISSFPDLPVKADTTHS
AKFLGLNSNSGAWPMSNYGKDVIIGLVDTGIWPESESFNDDGMTEIPSRWKGACESGTQF
NSSMCNKKLIGARFFNKGLIAKHPNVSISMNSTRDTDGHGTHTSTTAAGNYVEGASYFGY
GSGTASGMAPRARVAMYKALWDVGAVASDIIAAIDQAIIDGVDVMSLSLGLDGVLLYEDP
IAIATFAALEKDIFVATSAGNEGPFLGTLHNGIPWVLTVAASTMDRQFSGIVTLGNGVSV
IGSSLYPANSSFSQIPIVFMGSCEDLTELKKVGFKIVVCQDQNDSLSIQVDNANTARVAG
GVFITDYPDIEFFMQSSFPATFVNPENGKVVMDYIKTSSEPKASIEFSKTILGAKRAPRM
ATYSSRGPSPSCPVVLKPDLTAPGALILASWPKINPVADVNSRLLYSEFNLLSGTSMACP
HAAGVGALLKGAHPEWSPAAIRSAMMTTSDSLDNTLNPIKGIGDDNQPASPLAMGSGHIN
PNKALDPGFIYDVNLEDHINLLCALNYSTKQIQIITRSSSYTCSDPSLDLNYPSFIASFD
ANDSRSDSKTVQEFRRTVTNVGEAMSTYNAKLTGMDGFQVSVVPDKLVFKDKYQKLSYKL
RIEGPSLMKETVAFGSLSWVDVEAKHVVRSPIVATRLSLVAL

Transcript Sequence

Transcript ID

VIT_18s0001g10350.t01
Transcript Infomation

cdna chromosome:12X:18:8674915:8677295:1 gene:VIT_18s0001g10350 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCCCCCATACCTCAATTCTCTTTATAAAGCCCACCAACTTAATGGTGCTGTTCTAAAATT
ATCCCTTTCCGTTGCTCTCCTATGGCTACCCATATTCCTTTGTATGTGTGGCTCCTCCTT
ATCCCTATCTCACACCTCGTTTCCACGTTGGCACAGTCGGACACTTACATTGTCCACATG
GACCTATCAGCCATGCCTAAAGCTTTCTCCGGCCATCATAGCTGGTACATGGCTACCCTT
GCGTCTGTGTCAGATAATACCGCTGCCACTGCTAACCCTTACTCCTCTTCCTACTCTTCT
AAACTTATATACAGCTATACTAATGTAATCCATGGTTTTAGTGCAATCCTTTCCCCTTCG
GAGCTTGAGGCCCTGAAAAGCTTCCCGGGCTATATTTCTTCATTTCCAGATCTTCCTGTT
AAAGCTGATACAACTCATTCTGCTAAATTTCTTGGCCTGAATTCCAACTCCGGAGCGTGG
CCCATGTCAAACTATGGCAAAGATGTCATAATCGGGTTGGTGGACACTGGAATTTGGCCA
GAGAGTGAAAGCTTTAACGATGATGGAATGACCGAAATTCCATCTAGATGGAAAGGAGCA
TGCGAGAGCGGCACCCAGTTCAATTCTTCAATGTGCAACAAGAAGCTGATTGGAGCTCGG
TTCTTCAACAAAGGTCTAATTGCCAAACATCCCAATGTGTCCATCTCAATGAATTCAACC
CGTGACACCGATGGCCATGGGACCCATACGTCAACAACAGCAGCTGGAAATTATGTAGAG
GGTGCGTCGTACTTCGGCTATGGCTCAGGAACTGCTAGCGGCATGGCTCCCCGAGCTCGT
GTGGCCATGTACAAGGCCCTGTGGGACGTGGGTGCCGTCGCATCTGATATTATTGCTGCA
ATTGATCAGGCAATCATAGATGGGGTTGACGTCATGTCCTTGTCACTGGGCTTAGACGGG
GTTCTGTTGTATGAAGATCCCATTGCCATAGCCACATTTGCAGCCTTGGAGAAGGATATC
TTCGTAGCTACGTCAGCAGGAAACGAGGGGCCTTTTCTTGGAACCTTACACAACGGAATT
CCTTGGGTTCTAACTGTTGCTGCCAGCACCATGGACCGCCAATTCAGCGGGATTGTGACC
CTCGGGAATGGAGTTTCAGTCATCGGTTCCTCTCTCTATCCTGCAAATTCATCTTTCAGC
CAAATCCCAATTGTTTTCATGGGTTCATGCGAGGATTTGACGGAATTGAAGAAAGTTGGC
TTTAAGATTGTTGTGTGCCAGGACCAGAATGACTCCTTAAGCATCCAAGTTGATAATGCC
AACACTGCGAGAGTGGCGGGAGGAGTCTTCATAACAGATTACCCCGACATAGAATTCTTC
ATGCAAAGCTCTTTTCCAGCCACTTTTGTCAACCCTGAAAACGGAAAAGTTGTTATGGAC
TACATAAAGACTAGCTCTGAGCCAAAAGCAAGTATAGAATTTTCAAAAACAATTCTTGGT
GCCAAACGCGCACCAAGAATGGCTACCTACAGCTCCAGAGGGCCGTCTCCAAGCTGCCCA
GTGGTCTTGAAGCCCGACCTTACTGCCCCCGGCGCATTAATCTTGGCGTCATGGCCAAAA
ATTAACCCAGTGGCTGATGTGAATTCGCGGTTACTTTATAGTGAATTCAATCTATTGTCG
GGGACATCTATGGCGTGCCCCCATGCAGCAGGAGTAGGGGCACTTCTGAAGGGTGCACAC
CCTGAATGGAGCCCCGCAGCCATCCGGTCAGCCATGATGACCACTTCTGATTCACTGGAT
AATACACTCAACCCCATCAAAGGCATTGGCGACGATAACCAACCAGCCAGTCCCCTAGCC
ATGGGATCTGGCCATATCAATCCCAACAAGGCTCTTGACCCAGGATTCATCTATGACGTG
AATCTTGAAGACCATATAAATCTCCTCTGTGCATTGAATTACTCCACCAAGCAAATCCAA
ATTATCACAAGGTCATCTTCCTACACTTGCTCCGACCCCTCCTTGGATCTCAACTACCCG
TCTTTCATTGCCTCCTTTGATGCAAATGATTCCAGATCAGATTCTAAAACCGTGCAAGAA
TTTAGAAGAACAGTGACTAACGTCGGGGAAGCAATGTCGACTTACAACGCTAAGCTGACA
GGCATGGACGGATTTCAGGTGAGCGTGGTGCCTGACAAATTGGTTTTCAAAGACAAGTAC
CAGAAGCTAAGCTACAAGCTGAGGATAGAAGGCCCCAGTCTGATGAAAGAGACGGTAGCC
TTCGGTTCACTGAGCTGGGTGGATGTTGAAGCTAAACATGTGGTCAGAAGCCCCATAGTG
GCCACAAGGCTGAGCTTAGTAGCTCTGTGAGAAATCAAGTG