Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g10320.t01
CDS Infomation

cds chromosome:12X:18:8641104:8643404:-1 gene:VIT_18s0001g10320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGCAGGGTGCGGAGTTCCCGCAGTCTCTTTTCACATCATGCAGTACTGTCTTGGCTA
CTGCTCTTACTACTAGGGATCAACAATGCGATGTCAGAACTTGAAGAACGCCAGACATAC
ATCATTCATATGGACCATTCCTACAAGCCTGATTCCTTCTCAACTCATGAATCATGGCAC
CTTTCTACTCTAAAATCAGTGTCAACATCTCCAGTCAACCACAAAGAAATGTTGCTCTAC
TCCTATAGTCATGTGATGCAAGGTTTCAGTGCCAGACTCACACCTTCTGAACTATCGCAA
TTGGAGAAGTCTCCAGCTCATCGTGCCACATATCGGGAGACGTTTGGAAAGCTCTTCACC
ACCCACACCACTAAGTTCCTTGGGCTAAAACCCAACTCTGGCATATGGCCTGCAGCATCA
TATGGTGACGGTGTGATCATTGGAATAATTGACACTGGAATTTGGCCAGAAAGCAGGAGC
TTTAGCGACAAAGGGATGTCACCAGTGCCAGAGAGATGGAAGGGCCAGTGTGAGTATGGA
ACGGCATTTTCCCAATCTTGTTGCAACAGGAAGCTCGTTGGTGCTCGATCTTTTAGCAAA
GGCCTCATAGCAGCAGGCCGAAATATCTCCACGGAGCTTGACTTTGACTCAGCACGAGAC
AATGTTGGTCATGGCACCCACACCTCATCCACGGCTGCAGGTAACTACGTACTTGGTGCA
AGTCATTTTGGATATGCTAGGGGTAGCGCCAGAGGGGTGGCACCACGAGCGCATCTTGCC
ATGTACAAGGTCCTCTGGGCAACAGATACATATGAGAGTGCAGCTACTGATGTGCTTGCT
GGCATGGACCAAGCAATAGTTGATGGGGTTGATATCATGTCATTGTCTCTTGGCTTTGAC
CAAACACCTTATTTCAGCGATGTCATCGCCATTGCTTCTCTTTCCGCAATTGAGCAAGGA
ATTTTTGTTGTCTGTGCTACTGGGAATGATGGTGGGACAAGTAGTACACACAACGGAGCA
CCTTGGATCATGACAGTAGGAGCTGGCACCATTGATCGGAGCTTCGTGGCAACAATGACT
CTTGGAAATGGCTTAGTAGTGGAAGGGACATCATACTTCCCACAGAGCATTTACATTACT
AATGCACCTCTGTACTACGGAAGAGGGGATGCAAACAAAGAGACATGCAAGCTTTCAGCT
TTGGATCCAAATGAGGTAGCTGGAAAGGTAGTCCTCTGTGACAGTACAGAGACTGATGTT
TATACACAGATACAGGAGGTTGAAAGTGCAGGTGCATATGCGGGCATCTTCATTACCGAT
AATCTGTTGTTGGATCCAGATGAGTACTCCATTCCTAGCCTGGTTCTGCCAACTAATTCT
GGGACTTCAGTCCTGGAGTACGTAACAGGAATGAGTAATGCAACAGTGAAGGCCCTAAGG
TTCGTGTCAACGAAGTTGGGTACAAAGCCAGCACCTCAAGTGGCTTATTTCTCTTCTAGA
GGACCCGACCCAATTAGTCCGGGTGTTCTGAAACCAGATATTCTTGCTCCTGGAGTGGAT
GTATTGGCAGCAGTTGCACCCAACGTGCCATTCATGCAAATTGGTGACTATGATTTGGTG
ACAGATTATGCACTATTCTCCGGCACATCAATGGCAGCACCTCATGTTGCTGGAGTTGCA
GCATTGTTGAAGGCTGTCCACCGTGATTGGAGCCCAGCAGCCATCCGATCAGCTATCATG
ACTACCGCAAATACTATAGACAATATTGGCTCTGCTTTTAGAGACCAATGGACAGGACTT
CCCGCTTCTCCTCTAGATTTTGGCGCTGGCCATATCAATCCCAACAAAGCCATGGATCCT
GGACTCATCTTCGACATGGATTTGCAAGATTATGTTGAGTTCTTATGCGGCCTTGGCTAC
ACTAGGAAGCAGATGAGTGCCATCCTCAGACGCAACCAATGGAACTGCAGTGGGAAACCT
AATGACCTCAATTATCCTTCATTTGTGGCCATATTTACTAAAGGAGCAGAGTCTCCAAAA
GTAAGGAACTTCAGCAGGGTACTGACAAACGTGGGGAATGATACAGCAACTTACCAGGCA
GTTGTAGAGGTTCCTACTGGAATGAGAATCAAAACAGAGCCCAGTATTCTCACATTCACT
AGCAAATACCAGAAGCGAGGTTTCTTCGTGACCGTAGAGATTGATGCAGATGCTCCCAGT
GTCACCTATGGTTATCTGAAATGGATTGATCAACACAAGCACACTGTATCAAGCCCCATA
GTGGCCATCTATAATAAGTGA

Peptide Sequence

PEP ID

VIT_18s0001g10320.t01
PEP Infomation

pep chromosome:12X:18:8641104:8643404:-1 gene:VIT_18s0001g10320 transcript:VIT_18s0001g10320.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSRVRSSRSLFSHHAVLSWLLLLLLGINNAMSELEERQTYIIHMDHSYKPDSFSTHESWH
LSTLKSVSTSPVNHKEMLLYSYSHVMQGFSARLTPSELSQLEKSPAHRATYRETFGKLFT
THTTKFLGLKPNSGIWPAASYGDGVIIGIIDTGIWPESRSFSDKGMSPVPERWKGQCEYG
TAFSQSCCNRKLVGARSFSKGLIAAGRNISTELDFDSARDNVGHGTHTSSTAAGNYVLGA
SHFGYARGSARGVAPRAHLAMYKVLWATDTYESAATDVLAGMDQAIVDGVDIMSLSLGFD
QTPYFSDVIAIASLSAIEQGIFVVCATGNDGGTSSTHNGAPWIMTVGAGTIDRSFVATMT
LGNGLVVEGTSYFPQSIYITNAPLYYGRGDANKETCKLSALDPNEVAGKVVLCDSTETDV
YTQIQEVESAGAYAGIFITDNLLLDPDEYSIPSLVLPTNSGTSVLEYVTGMSNATVKALR
FVSTKLGTKPAPQVAYFSSRGPDPISPGVLKPDILAPGVDVLAAVAPNVPFMQIGDYDLV
TDYALFSGTSMAAPHVAGVAALLKAVHRDWSPAAIRSAIMTTANTIDNIGSAFRDQWTGL
PASPLDFGAGHINPNKAMDPGLIFDMDLQDYVEFLCGLGYTRKQMSAILRRNQWNCSGKP
NDLNYPSFVAIFTKGAESPKVRNFSRVLTNVGNDTATYQAVVEVPTGMRIKTEPSILTFT
SKYQKRGFFVTVEIDADAPSVTYGYLKWIDQHKHTVSSPIVAIYNK

Transcript Sequence

Transcript ID

VIT_18s0001g10320.t01
Transcript Infomation

cdna chromosome:12X:18:8641104:8643404:-1 gene:VIT_18s0001g10320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGCAGGGTGCGGAGTTCCCGCAGTCTCTTTTCACATCATGCAGTACTGTCTTGGCTA
CTGCTCTTACTACTAGGGATCAACAATGCGATGTCAGAACTTGAAGAACGCCAGACATAC
ATCATTCATATGGACCATTCCTACAAGCCTGATTCCTTCTCAACTCATGAATCATGGCAC
CTTTCTACTCTAAAATCAGTGTCAACATCTCCAGTCAACCACAAAGAAATGTTGCTCTAC
TCCTATAGTCATGTGATGCAAGGTTTCAGTGCCAGACTCACACCTTCTGAACTATCGCAA
TTGGAGAAGTCTCCAGCTCATCGTGCCACATATCGGGAGACGTTTGGAAAGCTCTTCACC
ACCCACACCACTAAGTTCCTTGGGCTAAAACCCAACTCTGGCATATGGCCTGCAGCATCA
TATGGTGACGGTGTGATCATTGGAATAATTGACACTGGAATTTGGCCAGAAAGCAGGAGC
TTTAGCGACAAAGGGATGTCACCAGTGCCAGAGAGATGGAAGGGCCAGTGTGAGTATGGA
ACGGCATTTTCCCAATCTTGTTGCAACAGGAAGCTCGTTGGTGCTCGATCTTTTAGCAAA
GGCCTCATAGCAGCAGGCCGAAATATCTCCACGGAGCTTGACTTTGACTCAGCACGAGAC
AATGTTGGTCATGGCACCCACACCTCATCCACGGCTGCAGGTAACTACGTACTTGGTGCA
AGTCATTTTGGATATGCTAGGGGTAGCGCCAGAGGGGTGGCACCACGAGCGCATCTTGCC
ATGTACAAGGTCCTCTGGGCAACAGATACATATGAGAGTGCAGCTACTGATGTGCTTGCT
GGCATGGACCAAGCAATAGTTGATGGGGTTGATATCATGTCATTGTCTCTTGGCTTTGAC
CAAACACCTTATTTCAGCGATGTCATCGCCATTGCTTCTCTTTCCGCAATTGAGCAAGGA
ATTTTTGTTGTCTGTGCTACTGGGAATGATGGTGGGACAAGTAGTACACACAACGGAGCA
CCTTGGATCATGACAGTAGGAGCTGGCACCATTGATCGGAGCTTCGTGGCAACAATGACT
CTTGGAAATGGCTTAGTAGTGGAAGGGACATCATACTTCCCACAGAGCATTTACATTACT
AATGCACCTCTGTACTACGGAAGAGGGGATGCAAACAAAGAGACATGCAAGCTTTCAGCT
TTGGATCCAAATGAGGTAGCTGGAAAGGTAGTCCTCTGTGACAGTACAGAGACTGATGTT
TATACACAGATACAGGAGGTTGAAAGTGCAGGTGCATATGCGGGCATCTTCATTACCGAT
AATCTGTTGTTGGATCCAGATGAGTACTCCATTCCTAGCCTGGTTCTGCCAACTAATTCT
GGGACTTCAGTCCTGGAGTACGTAACAGGAATGAGTAATGCAACAGTGAAGGCCCTAAGG
TTCGTGTCAACGAAGTTGGGTACAAAGCCAGCACCTCAAGTGGCTTATTTCTCTTCTAGA
GGACCCGACCCAATTAGTCCGGGTGTTCTGAAACCAGATATTCTTGCTCCTGGAGTGGAT
GTATTGGCAGCAGTTGCACCCAACGTGCCATTCATGCAAATTGGTGACTATGATTTGGTG
ACAGATTATGCACTATTCTCCGGCACATCAATGGCAGCACCTCATGTTGCTGGAGTTGCA
GCATTGTTGAAGGCTGTCCACCGTGATTGGAGCCCAGCAGCCATCCGATCAGCTATCATG
ACTACCGCAAATACTATAGACAATATTGGCTCTGCTTTTAGAGACCAATGGACAGGACTT
CCCGCTTCTCCTCTAGATTTTGGCGCTGGCCATATCAATCCCAACAAAGCCATGGATCCT
GGACTCATCTTCGACATGGATTTGCAAGATTATGTTGAGTTCTTATGCGGCCTTGGCTAC
ACTAGGAAGCAGATGAGTGCCATCCTCAGACGCAACCAATGGAACTGCAGTGGGAAACCT
AATGACCTCAATTATCCTTCATTTGTGGCCATATTTACTAAAGGAGCAGAGTCTCCAAAA
GTAAGGAACTTCAGCAGGGTACTGACAAACGTGGGGAATGATACAGCAACTTACCAGGCA
GTTGTAGAGGTTCCTACTGGAATGAGAATCAAAACAGAGCCCAGTATTCTCACATTCACT
AGCAAATACCAGAAGCGAGGTTTCTTCGTGACCGTAGAGATTGATGCAGATGCTCCCAGT
GTCACCTATGGTTATCTGAAATGGATTGATCAACACAAGCACACTGTATCAAGCCCCATA
GTGGCCATCTATAATAAGTGA