Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g10310.t01
CDS Infomation

cds chromosome:12X:18:8634010:8637098:1 gene:VIT_18s0001g10310 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCTGAGGGTGCGTTTTTGAACGATGAGCTCTCAAAACATACCTCAATTTTTGGTCTG
CGCTTGTGGGTAGTTGTGGGCATATGTGTGGGGGCTGGCATTGTTCTTGTTCTGTTCCTC
ATATCGCTTTGGTTCACTTCAAGGCGGAACAGTGCCAAGTCCTCCCACAAACCCACCATC
CCGAATGTGTCCAAAGAAATCCAGGAAATCAGAATCGACCATTCCCGAAACCCAGCGAAC
CCCAACCCTGACCCCAAGACTCATCATCCTCCAAATGCGAACCCACTCCCTGAATCGGAC
CCCTTTGCCGGGGCGGAGCGACTGCTTCAGCCGGGAGAGGAGAGTCCCGTGGGCCTTCAA
AGAATTCACATTGAGATTGGGAAAGATCACCGGATTTCGTACCCGGAACGCGGCGGCGGG
TCGTCTCATGGAAGTGGAGAGGCTCGGTCCGGTGATCAGGTGACAATTGCTGTGCCTGAG
GTTTCGCATTTGGGTTGGGGACATTGGTACACTCTGAGAGAGCTTGAACTTTCGACCAAT
GGGTTTGCTGATGAAAACGTGATAGGTGAAGGTGGGTATGGGATCGTTTACCGTGGTGTT
TTGGAGGACAATACACAGGTGGCTGTCAAGAATTTGCTCAATAACAGGGGACAAGCTGAG
AAGGAGTTTAAGGTTGAAGTTGAAGCAATTGGGCGTGTCAGGCATAAGAACTTGGTGAGG
CTGCTTGGTTACTGTGCTGAAGGAGCCCATAGGATGCTAGTTTATGAGTATGTTGACAAT
GGGAACTTAGAACAGTGGCTTCATGGAGATGTGGGGCCTCACAGCCCTCTTACTTGGGAC
ATCCGAATGAACATTATAATTGGAACAGCCAAAGGGTTGACTTATCTGCACGAGGGGCTT
GAGCCTAAGGTCGTCCATCGTGATATTAAGTCGAGCAACATTTTGCTTGATAAGCAGTGG
AATCCTAAAGTGTCTGACTTTGGCCTGGCGAAGCTCTTGGGCTCAGAGAGGAGTTATGTC
ACAACTCGTGTGATGGGAACATTTGGCTATGTAGCTCCAGAATACGCTAGTACTGGCATG
TTGAATGAAAGAAGTGATGTATACAGTTTTGGTATTCTTCTTATGGAGATAATTTCTGGG
AGAAACCCAGTTGATTATAGCCGGCCTCCGGGAGAGGTGAACCTTGTTGAGTGGCTTAAA
GCAATGGTTACAAACCGGAATGCAGAGGGTGTTTTGGATCCCAAGATACCTGAGAAGCCA
TCTTCCAGGGCATTGAAGCGTGCCCTTTTAGTGGCTTTGCGCTGCGTGGACCCAAATGCC
CAGAAGAGGCCAAAGATGGGGCATGTGATTCATATGCTTGAAGCTGATGATTTCCCCTTC
CGAGATGATCGTAGAGCTGGAAGGGAACATGGGCGCGCACAGCGTGATGGAATGAAGGAT
AGGTTTCTGGAGAAACGGATGATTGAATCAGGTGACAGTAGTGGGTATGAAAGTGGTGCT
CAAAACAATAGATCCTTGTGGAAAAAGCCAGAAGAACTCGTAGAAGAGCAGTAG

Peptide Sequence

PEP ID

VIT_18s0001g10310.t01
PEP Infomation

pep chromosome:12X:18:8634010:8637098:1 gene:VIT_18s0001g10310 transcript:VIT_18s0001g10310.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPEGAFLNDELSKHTSIFGLRLWVVVGICVGAGIVLVLFLISLWFTSRRNSAKSSHKPTI
PNVSKEIQEIRIDHSRNPANPNPDPKTHHPPNANPLPESDPFAGAERLLQPGEESPVGLQ
RIHIEIGKDHRISYPERGGGSSHGSGEARSGDQVTIAVPEVSHLGWGHWYTLRELELSTN
GFADENVIGEGGYGIVYRGVLEDNTQVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVR
LLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPHSPLTWDIRMNIIIGTAKGLTYLHEGL
EPKVVHRDIKSSNILLDKQWNPKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGM
LNERSDVYSFGILLMEIISGRNPVDYSRPPGEVNLVEWLKAMVTNRNAEGVLDPKIPEKP
SSRALKRALLVALRCVDPNAQKRPKMGHVIHMLEADDFPFRDDRRAGREHGRAQRDGMKD
RFLEKRMIESGDSSGYESGAQNNRSLWKKPEELVEEQ

Transcript Sequence

Transcript ID

VIT_18s0001g10310.t01
Transcript Infomation

cdna chromosome:12X:18:8634010:8637098:1 gene:VIT_18s0001g10310 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGTCTTCGCCGAAGGAGGAGGAGGAGAAGACAATGCCTGAGGGTGCGTTTTTGAACGAT
GAGCTCTCAAAACATACCTCAATTTTTGGTCTGCGCTTGTGGGTAGTTGTGGGCATATGT
GTGGGGGCTGGCATTGTTCTTGTTCTGTTCCTCATATCGCTTTGGTTCACTTCAAGGCGG
AACAGTGCCAAGTCCTCCCACAAACCCACCATCCCGAATGTGTCCAAAGAAATCCAGGAA
ATCAGAATCGACCATTCCCGAAACCCAGCGAACCCCAACCCTGACCCCAAGACTCATCAT
CCTCCAAATGCGAACCCACTCCCTGAATCGGACCCCTTTGCCGGGGCGGAGCGACTGCTT
CAGCCGGGAGAGGAGAGTCCCGTGGGCCTTCAAAGAATTCACATTGAGATTGGGAAAGAT
CACCGGATTTCGTACCCGGAACGCGGCGGCGGGTCGTCTCATGGAAGTGGAGAGGCTCGG
TCCGGTGATCAGGTGACAATTGCTGTGCCTGAGGTTTCGCATTTGGGTTGGGGACATTGG
TACACTCTGAGAGAGCTTGAACTTTCGACCAATGGGTTTGCTGATGAAAACGTGATAGGT
GAAGGTGGGTATGGGATCGTTTACCGTGGTGTTTTGGAGGACAATACACAGGTGGCTGTC
AAGAATTTGCTCAATAACAGGGGACAAGCTGAGAAGGAGTTTAAGGTTGAAGTTGAAGCA
ATTGGGCGTGTCAGGCATAAGAACTTGGTGAGGCTGCTTGGTTACTGTGCTGAAGGAGCC
CATAGGATGCTAGTTTATGAGTATGTTGACAATGGGAACTTAGAACAGTGGCTTCATGGA
GATGTGGGGCCTCACAGCCCTCTTACTTGGGACATCCGAATGAACATTATAATTGGAACA
GCCAAAGGGTTGACTTATCTGCACGAGGGGCTTGAGCCTAAGGTCGTCCATCGTGATATT
AAGTCGAGCAACATTTTGCTTGATAAGCAGTGGAATCCTAAAGTGTCTGACTTTGGCCTG
GCGAAGCTCTTGGGCTCAGAGAGGAGTTATGTCACAACTCGTGTGATGGGAACATTTGGC
TATGTAGCTCCAGAATACGCTAGTACTGGCATGTTGAATGAAAGAAGTGATGTATACAGT
TTTGGTATTCTTCTTATGGAGATAATTTCTGGGAGAAACCCAGTTGATTATAGCCGGCCT
CCGGGAGAGGTGAACCTTGTTGAGTGGCTTAAAGCAATGGTTACAAACCGGAATGCAGAG
GGTGTTTTGGATCCCAAGATACCTGAGAAGCCATCTTCCAGGGCATTGAAGCGTGCCCTT
TTAGTGGCTTTGCGCTGCGTGGACCCAAATGCCCAGAAGAGGCCAAAGATGGGGCATGTG
ATTCATATGCTTGAAGCTGATGATTTCCCCTTCCGAGATGATCGTAGAGCTGGAAGGGAA
CATGGGCGCGCACAGCGTGATGGAATGAAGGATAGGTTTCTGGAGAAACGGATGATTGAA
TCAGGTGACAGTAGTGGGTATGAAAGTGGTGCTCAAAACAATAGATCCTTGTGGAAAAAG
CCAGAAGAACTCGTAGAAGAGCAGTAGTTTCATATTACTCGTATAGAAGGTGAATTGACA
TACGTCATTATTGTCATTTTTTTCCTCCATAGCTGAGTCTATGCAAACATCATTTGGTTC
GCCTGTATATGTGATTTATATCAATTTGAGTTTCACTTTTGTAGATTATGTAGCATCTTG
TGT