Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g10040.t01
CDS Infomation

cds chromosome:12X:18:8406065:8407692:1 gene:VIT_18s0001g10040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTAGTTCATTTTTCATTGTTGTGATAACCTTGTTCATCTTGGGATGCCAAGGACAA
AATCCAAAACGTGGCCTCCCTCCCCCTCAAGGACAATATCCAACACGTCCCCCCCCTCCC
CCTCGTCTTCCTCCGCGTCCACGATTTCCAAGCTTGGGAGGTCCACTTCTCCCACGTCAA
CCAGCCAATAGGCCCGGACCCCTCAGTAACAGAAACCTTGTTCTGTTCATAACCCAAGAG
CTCAAGAGGAACATTACATCTGACCCCCAAAACTATACAGGCTCCTGGGTTGGCAGGAAC
TACTGCCTCTTCAAGGGGTTCTACTGTGATACTGTGCCCGACAAGAACATTACTGGGCTT
GCCGGCATTGATTTCAACGGCGCCAGGTTTGGCGGTAACTTAAACTTTTATCGCTTCATC
CGCTTTCTTCCTGACATTGCCATCTTTCATGCAAATTCCAATAACTTCAGCGGCGTCATT
CGTCCAAATATCAACAAATTGAGATATTTCTACGAGATTGATCTGAGCAATAATGGATTC
CAGGGAGGGTTCCCCGTTTCCGTTATTGGTGCACTTCAATTGACCTTCGTGGACGTTCGT
TTCAACACCTACAATGGCCCAGTTCCTCCTCGGGTATTCAGTATCCAAACTGATGTTCTC
TTCATCAACAATAATAATTTCGCCCAAAGAATTCCTAGCGCATTCGGCAACACCACTGCG
CGCTATATTACCCTTGCCAACAACGGATTCATCGGTTCCATCCCTCAGAGCATTGGCCGA
ACTTGGCAAACCCTAACTGAGGTTCTCTTCTTGAAAAACCGCCTCTCCGGTTGCCTCCCA
TATGAAATTGGGTTCTTGCAAATGGCCACCGTTTTTGATGCAGGGTTCAACACGTTGACG
GGTCCTATACCGCAATCTTTTGCTTGCTTGAAGAAGCTGCAGCTGCTGAGCTTGGCGCAC
AACCAGTTCTACGGCAGAATTCCAGACTCATTATGTCGGCTACCCAACGCATACAATTTT
ACTTTGTCATATAATTACTTCAACTCCATAGGTCCATACTGCAAGAGGTTGGTGAACATT
GGGAGGCTCGATGTGAGGAGGAACTGCATTACGGGTTTGCCGAATCAAAGATCTGCAGCG
GAGTGTACGGCCTTCTACTCCGTATCTAGGACATGTCCGCGCCCGGGTTCCTTCAACGTA
ATTACTTGTTCGAACCCAGCTGCTTCATTAAGCAGCGCCCAAGTTGCTTCACTACAAGCA
ATGGCTCCGGCTCCCTCACCCGTCACCTACAAAGCCCTTGAGCCTCCCCGATGA

Peptide Sequence

PEP ID

VIT_18s0001g10040.t01
PEP Infomation

pep chromosome:12X:18:8406065:8407692:1 gene:VIT_18s0001g10040 transcript:VIT_18s0001g10040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSSSFFIVVITLFILGCQGQNPKRGLPPPQGQYPTRPPPPPRLPPRPRFPSLGGPLLPRQ
PANRPGPLSNRNLVLFITQELKRNITSDPQNYTGSWVGRNYCLFKGFYCDTVPDKNITGL
AGIDFNGARFGGNLNFYRFIRFLPDIAIFHANSNNFSGVIRPNINKLRYFYEIDLSNNGF
QGGFPVSVIGALQLTFVDVRFNTYNGPVPPRVFSIQTDVLFINNNNFAQRIPSAFGNTTA
RYITLANNGFIGSIPQSIGRTWQTLTEVLFLKNRLSGCLPYEIGFLQMATVFDAGFNTLT
GPIPQSFACLKKLQLLSLAHNQFYGRIPDSLCRLPNAYNFTLSYNYFNSIGPYCKRLVNI
GRLDVRRNCITGLPNQRSAAECTAFYSVSRTCPRPGSFNVITCSNPAASLSSAQVASLQA
MAPAPSPVTYKALEPPR

Transcript Sequence

Transcript ID

VIT_18s0001g10040.t01
Transcript Infomation

cdna chromosome:12X:18:8406065:8407692:1 gene:VIT_18s0001g10040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAAGCCTCTTCTACAGAAGCAAAGAAAGTGAGGCGCAGCCATGTCTAGTTCATTTTTCA
TTGTTGTGATAACCTTGTTCATCTTGGGATGCCAAGGACAAAATCCAAAACGTGGCCTCC
CTCCCCCTCAAGGACAATATCCAACACGTCCCCCCCCTCCCCCTCGTCTTCCTCCGCGTC
CACGATTTCCAAGCTTGGGAGGTCCACTTCTCCCACGTCAACCAGCCAATAGGCCCGGAC
CCCTCAGTAACAGAAACCTTGTTCTGTTCATAACCCAAGAGCTCAAGAGGAACATTACAT
CTGACCCCCAAAACTATACAGGCTCCTGGGTTGGCAGGAACTACTGCCTCTTCAAGGGGT
TCTACTGTGATACTGTGCCCGACAAGAACATTACTGGGCTTGCCGGCATTGATTTCAACG
GCGCCAGGTTTGGCGGTAACTTAAACTTTTATCGCTTCATCCGCTTTCTTCCTGACATTG
CCATCTTTCATGCAAATTCCAATAACTTCAGCGGCGTCATTCGTCCAAATATCAACAAAT
TGAGATATTTCTACGAGATTGATCTGAGCAATAATGGATTCCAGGGAGGGTTCCCCGTTT
CCGTTATTGGTGCACTTCAATTGACCTTCGTGGACGTTCGTTTCAACACCTACAATGGCC
CAGTTCCTCCTCGGGTATTCAGTATCCAAACTGATGTTCTCTTCATCAACAATAATAATT
TCGCCCAAAGAATTCCTAGCGCATTCGGCAACACCACTGCGCGCTATATTACCCTTGCCA
ACAACGGATTCATCGGTTCCATCCCTCAGAGCATTGGCCGAACTTGGCAAACCCTAACTG
AGGTTCTCTTCTTGAAAAACCGCCTCTCCGGTTGCCTCCCATATGAAATTGGGTTCTTGC
AAATGGCCACCGTTTTTGATGCAGGGTTCAACACGTTGACGGGTCCTATACCGCAATCTT
TTGCTTGCTTGAAGAAGCTGCAGCTGCTGAGCTTGGCGCACAACCAGTTCTACGGCAGAA
TTCCAGACTCATTATGTCGGCTACCCAACGCATACAATTTTACTTTGTCATATAATTACT
TCAACTCCATAGGTCCATACTGCAAGAGGTTGGTGAACATTGGGAGGCTCGATGTGAGGA
GGAACTGCATTACGGGTTTGCCGAATCAAAGATCTGCAGCGGAGTGTACGGCCTTCTACT
CCGTATCTAGGACATGTCCGCGCCCGGGTTCCTTCAACGTAATTACTTGTTCGAACCCAG
CTGCTTCATTAAGCAGCGCCCAAGTTGCTTCACTACAAGCAATGGCTCCGGCTCCCTCAC
CCGTCACCTACAAAGCCCTTGAGCCTCCCCGATGATCCACTGGCTTACGAGTCGAACTAT
GTTGGTGAGCTCATGCTAGAATAAGGTCTTATCTACCTGTACGTGTTTGCTTCTCTTAAT
TTACTCCGCTCCTTGTTTGGCCAATCCACTTTTTTTTTTCATTTTTTTTTCTTTTTCTTT
CTTTGGGTTCATATCTGTATGAATTGGTGCCATCGTTATTCCTATGCAAAGGTTTTCTTC
CAGTGTCGGTCAGCTCCTGTATTTTGCTTTTAAATGAATTGGTATTTCTCCGTAAGAGAA
TCAATCAA