Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g09940.t01
CDS Infomation

cds chromosome:12X:18:8334491:8336451:1 gene:VIT_18s0001g09940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGCCAATCAGCTTCTACTTCTGCGATATCATCAGGATCTAGTCGCCGAGGCAGCAAT
CACCCTCATCGATCCCGGAGTAAATCAATGGTGCAGATCCCTTCGATGCAGGTCGAAGAA
AACGTTCAGTTTCGGCAGATCGATGAAGACTTGGACTACATCTCCGATCTGCCCGACGAA
TGCTTGGCTTGCATTTTCCAGTCGCTTGGATCTGGTGATCGCAAACAGTGCTCACTCGTC
TGCCGGCGATGGCTCCGGATTGAGGGGCAGACCCGTCATCGACTTTCTCTCAATGCACAC
TCCGATCTACTTACCGTCGTTCCTTCTCTATTCTCTAGGTTTGACGCGGTGACGAAACTC
GCTCTCAAATGTGATCGGAGATCTGTTAGCATTGGCGACGATGCCCTTATACTCATTTCT
CTCGGGTGCAGGAATCTGACTCGTCTCAAACTCCGCGCTTGCCGTGAATTGACCGATGCC
GGCATGGGGGTTTTTGCGAAGAATTGCAAAGGGTTGAAAAAGCTTTCATGTGGATCTTGT
ACCTTTGGAGCCAAGGGCATGAGCGCAGTCCTAGATAATTGCTCTGCTCTCGAAGAGTTA
TCCGTGAAGCGCCTCCGAGGAATCTCCGATGGATCGGCTGTGGACCAGATTGGGCCCGGT
GTAGCTGCATCATCTCTCAAAACAATATGCTTGAAGGAGCAGTATAATGGACAGTGTTTC
TGGCCGCTTATTATCGGCGCCAAGAATCTACGGACACTAAAACTCTTCAGGTGTTCTGGG
GATTGCGACAACCTTCTCCAGCTTGTTGCTAATCGAACCACTAGTATGGTTGAAATCCAT
CTGGAAAGGCTTCAAGTTAGTGATCTCGGCCTTGTAGCTATATCGCATTTTTTGGATCTT
GAGATCTTACACCTTGTGAAGACTTCCGAGTGCACGAATGCAGGACTTGTGTCAGTCGCT
GAACGATGTAAACTTCTGAGGAAGCTTCACATTGATGGATGGAAGGCAAACAGGATAGGC
GATGAAGGTCTAAGTGCGGTTGCAAAATGTTGCCCCAATCTTCAGGAACTTGTTCTTATT
GGTGTCAATCCCACAAAGTTGAGTTTGGAGATGCTGGCTGCAAATTGCCAGAATCTGGAG
CGGTTGGCATTGTGTGCGAGTGATACTGTTGGTGATGCTGAGATTTCTTGTATTGCTGCA
AAATGCTTGGCATTGAAGAAGCTATGTATCAAGAGCTGCCCTGTTTCGGATCAGGGTATG
AGAGCACTTGCATGCGGATGCCCTAATTTGGTGAAGGTGAAGGTTAAGAAGTGCAGGGCA
GTGACTTATGAGGGTGCGGATGGATTGAGGGCAAGTAGGGAATCACTGGCTGTCAATTTA
GACACGGGTGAAACTGAGCATCAAGATGCAAGTGCTAGTGATGGTGGGGCACAGGAAAAT
GCAGTTGAATTGCCTCCCTTGGCCAGTCAAAATGGAGCTGCTAATATTGCTTCGAGCAGT
TCTGGTCGATCAAACTCTCTTAAGGCAAGGTTAGGGCTTCTAACGGGAAGGAATTTAGTG
GCCTCAACTTTGAGAAGGTGGACAAGCAGTAACAGCAGTTCCCGGGGTAATCAGAGAAGT
AACTGA

Peptide Sequence

PEP ID

VIT_18s0001g09940.t01
PEP Infomation

pep chromosome:12X:18:8334491:8336451:1 gene:VIT_18s0001g09940 transcript:VIT_18s0001g09940.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGQSASTSAISSGSSRRGSNHPHRSRSKSMVQIPSMQVEENVQFRQIDEDLDYISDLPDE
CLACIFQSLGSGDRKQCSLVCRRWLRIEGQTRHRLSLNAHSDLLTVVPSLFSRFDAVTKL
ALKCDRRSVSIGDDALILISLGCRNLTRLKLRACRELTDAGMGVFAKNCKGLKKLSCGSC
TFGAKGMSAVLDNCSALEELSVKRLRGISDGSAVDQIGPGVAASSLKTICLKEQYNGQCF
WPLIIGAKNLRTLKLFRCSGDCDNLLQLVANRTTSMVEIHLERLQVSDLGLVAISHFLDL
EILHLVKTSECTNAGLVSVAERCKLLRKLHIDGWKANRIGDEGLSAVAKCCPNLQELVLI
GVNPTKLSLEMLAANCQNLERLALCASDTVGDAEISCIAAKCLALKKLCIKSCPVSDQGM
RALACGCPNLVKVKVKKCRAVTYEGADGLRASRESLAVNLDTGETEHQDASASDGGAQEN
AVELPPLASQNGAANIASSSSGRSNSLKARLGLLTGRNLVASTLRRWTSSNSSSRGNQRS
N

Transcript Sequence

Transcript ID

VIT_18s0001g09940.t01
Transcript Infomation

cdna chromosome:12X:18:8334491:8336451:1 gene:VIT_18s0001g09940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGGAGTTGAGAGAGGCCATCCGTAACCTTAGAGCCGATCTCAGCCTCAAACTAAGCTCCG
GTGGTGCTTAGATTAAGGAGGATTAGGGTTCGTATTGGTTCGCTGTTAGTAGTTCCGGTC
GAAGTGGATGGGCCAATCAGCTTCTACTTCTGCGATATCATCAGGATCTAGTCGCCGAGG
CAGCAATCACCCTCATCGATCCCGGAGTAAATCAATGGTGCAGATCCCTTCGATGCAGGT
CGAAGAAAACGTTCAGTTTCGGCAGATCGATGAAGACTTGGACTACATCTCCGATCTGCC
CGACGAATGCTTGGCTTGCATTTTCCAGTCGCTTGGATCTGGTGATCGCAAACAGTGCTC
ACTCGTCTGCCGGCGATGGCTCCGGATTGAGGGGCAGACCCGTCATCGACTTTCTCTCAA
TGCACACTCCGATCTACTTACCGTCGTTCCTTCTCTATTCTCTAGGTTTGACGCGGTGAC
GAAACTCGCTCTCAAATGTGATCGGAGATCTGTTAGCATTGGCGACGATGCCCTTATACT
CATTTCTCTCGGGTGCAGGAATCTGACTCGTCTCAAACTCCGCGCTTGCCGTGAATTGAC
CGATGCCGGCATGGGGGTTTTTGCGAAGAATTGCAAAGGGTTGAAAAAGCTTTCATGTGG
ATCTTGTACCTTTGGAGCCAAGGGCATGAGCGCAGTCCTAGATAATTGCTCTGCTCTCGA
AGAGTTATCCGTGAAGCGCCTCCGAGGAATCTCCGATGGATCGGCTGTGGACCAGATTGG
GCCCGGTGTAGCTGCATCATCTCTCAAAACAATATGCTTGAAGGAGCAGTATAATGGACA
GTGTTTCTGGCCGCTTATTATCGGCGCCAAGAATCTACGGACACTAAAACTCTTCAGGTG
TTCTGGGGATTGCGACAACCTTCTCCAGCTTGTTGCTAATCGAACCACTAGTATGGTTGA
AATCCATCTGGAAAGGCTTCAAGTTAGTGATCTCGGCCTTGTAGCTATATCGCATTTTTT
GGATCTTGAGATCTTACACCTTGTGAAGACTTCCGAGTGCACGAATGCAGGACTTGTGTC
AGTCGCTGAACGATGTAAACTTCTGAGGAAGCTTCACATTGATGGATGGAAGGCAAACAG
GATAGGCGATGAAGGTCTAAGTGCGGTTGCAAAATGTTGCCCCAATCTTCAGGAACTTGT
TCTTATTGGTGTCAATCCCACAAAGTTGAGTTTGGAGATGCTGGCTGCAAATTGCCAGAA
TCTGGAGCGGTTGGCATTGTGTGCGAGTGATACTGTTGGTGATGCTGAGATTTCTTGTAT
TGCTGCAAAATGCTTGGCATTGAAGAAGCTATGTATCAAGAGCTGCCCTGTTTCGGATCA
GGGTATGAGAGCACTTGCATGCGGATGCCCTAATTTGGTGAAGGTGAAGGTTAAGAAGTG
CAGGGCAGTGACTTATGAGGGTGCGGATGGATTGAGGGCAAGTAGGGAATCACTGGCTGT
CAATTTAGACACGGGTGAAACTGAGCATCAAGATGCAAGTGCTAGTGATGGTGGGGCACA
GGAAAATGCAGTTGAATTGCCTCCCTTGGCCAGTCAAAATGGAGCTGCTAATATTGCTTC
GAGCAGTTCTGGTCGATCAAACTCTCTTAAGGCAAGGTTAGGGCTTCTAACGGGAAGGAA
TTTAGTGGCCTCAACTTTGAGAAGGTGGACAAGCAGTAACAGCAGTTCCCGGGGTAATCA
GAGAAGTAACTGAACAGAACTTGGGAAATGAAAAACACTATTGATCTAGTTACATTATTT
TTTATTGTATTTTCTGCTCCTGTCTTTTGTGTATCTATCCTTGTGTGTTTTATTGCCTGA
AATGAACATCTAGTGTCTGGGGTTGGATTTTATCAGTTCCACCCTTTTTCCCCCCTTTGG
TTTATCTCATATACTTACTGGAACTGTTGCTTTTTTCGTTG