Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g09920.t01
CDS Infomation

cds chromosome:12X:18:8294435:8296759:-1 gene:VIT_18s0001g09920 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCAGCCTCAAGAACAGAAAACACACCAACAGCCGCACAACCTCCCATTCCTTTTG
GACACTCTTTACTGCGAAGAGAACCACTGGGAGGAAGAAGTGAGAGAGGAGGGTTTCTTA
GAAGAGGAAGAAGAAGAGAGCTATTACAGTGATGGCAGTAAACCAAACGCTCCACCGTTA
TTGGAGCCGGACCTCCTATGCGAAGACGAAGAGCTCGTCTCTTTGTTCTCAAAAGAAGAG
AAAAATGACCTCCATAGTAACCCCGAAAGCAACCCATTAGCGGCTGGAGCTAGAAGCGAG
GCCGTGGAGTGGATGCTGAGGGTCAATGCCCACTACTCTTTCTCTGCTCTCACTGCAGTC
CTGGCTGTTAATTATTTTGATAGGTTTCTCTTCAGCTGCGATGTTCAGGGAGAAAAGCCA
TGGATGACCCAACTCGCCGCTGTGGCTTGTCTCTCCCTTGCTGCTAAGGTGGAAGAGACC
CAAGTGCCCCTTTTACTAGACTTGCAAGTGGAGGAGACGATGTATGTGTTCGAGGCAAAG
ACCATTCAGAGGATGGAGATTATGGTGCTCTCCACGCTTCGATGGAAGATGAACCCTGTG
ACCCCGCTTTCATTTCTTGATTATATTACGAGGAGGCTTGGATTGAAAAATCATCTCTGT
TGGGAATTTCTCAAGAGGTGTGAGCGCCTCCTTCTCTCTGTTCTTTCTGATTGTAGGTTC
GGGTGTTATCTTCCTTCTGTAATCGCCACCGCCATAATGCTGCATGTCATCGATAGCGTA
GAACCCTGCATTCGTGTCCAATACCAGAGCCAGCTACTGGGTATTCTCGGAATTGATAAG
GACAAAGTAGAGGATTGCAGTCAGCTCATCCTGGATATAGCATCGAGTGCCCGTTGTCAC
CATCACAATAAACGCAAGTTTGCCTCCACACCGGGCAGTCCAAATGGCGTTATGGATGGA
TGGTTCAGCTGCGACAGCTCAAATGATTCATGGGCTGTAGCGGTTTCTTCCTCGCCTTCC
TCATCGGAGCATTTGTCCAAGAAGAGTAGAGGTCAGGAGCAGCATCTGCAGACTCTCAAC
CAAGCTACTGCTGATGCCCCGACGGTCATTCCTCGCTAG

Peptide Sequence

PEP ID

VIT_18s0001g09920.t01
PEP Infomation

pep chromosome:12X:18:8294435:8296759:-1 gene:VIT_18s0001g09920 transcript:VIT_18s0001g09920.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAQPQEQKTHQQPHNLPFLLDTLYCEENHWEEEVREEGFLEEEEEESYYSDGSKPNAPPL
LEPDLLCEDEELVSLFSKEEKNDLHSNPESNPLAAGARSEAVEWMLRVNAHYSFSALTAV
LAVNYFDRFLFSCDVQGEKPWMTQLAAVACLSLAAKVEETQVPLLLDLQVEETMYVFEAK
TIQRMEIMVLSTLRWKMNPVTPLSFLDYITRRLGLKNHLCWEFLKRCERLLLSVLSDCRF
GCYLPSVIATAIMLHVIDSVEPCIRVQYQSQLLGILGIDKDKVEDCSQLILDIASSARCH
HHNKRKFASTPGSPNGVMDGWFSCDSSNDSWAVAVSSSPSSSEHLSKKSRGQEQHLQTLN
QATADAPTVIPR

Transcript Sequence

Transcript ID

VIT_18s0001g09920.t01
Transcript Infomation

cdna chromosome:12X:18:8294435:8296759:-1 gene:VIT_18s0001g09920 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTGAGTCTCCCTAGTCCCTCCCCAGTATTGAGAGAGAGAGAGAGAGATGCCTCAAGCTTG
GAGCTCAGGCTTCTCTTTCTTCCTCATCTTCTCTGGATTATAATGAACCAAGGCCCAGAC
CTCTTCTTCTCAGAAGAAGATGGCTCAGCCTCAAGAACAGAAAACACACCAACAGCCGCA
CAACCTCCCATTCCTTTTGGACACTCTTTACTGCGAAGAGAACCACTGGGAGGAAGAAGT
GAGAGAGGAGGGTTTCTTAGAAGAGGAAGAAGAAGAGAGCTATTACAGTGATGGCAGTAA
ACCAAACGCTCCACCGTTATTGGAGCCGGACCTCCTATGCGAAGACGAAGAGCTCGTCTC
TTTGTTCTCAAAAGAAGAGAAAAATGACCTCCATAGTAACCCCGAAAGCAACCCATTAGC
GGCTGGAGCTAGAAGCGAGGCCGTGGAGTGGATGCTGAGGGTCAATGCCCACTACTCTTT
CTCTGCTCTCACTGCAGTCCTGGCTGTTAATTATTTTGATAGGTTTCTCTTCAGCTGCGA
TGTTCAGGGAGAAAAGCCATGGATGACCCAACTCGCCGCTGTGGCTTGTCTCTCCCTTGC
TGCTAAGGTGGAAGAGACCCAAGTGCCCCTTTTACTAGACTTGCAAGTGGAGGAGACGAT
GTATGTGTTCGAGGCAAAGACCATTCAGAGGATGGAGATTATGGTGCTCTCCACGCTTCG
ATGGAAGATGAACCCTGTGACCCCGCTTTCATTTCTTGATTATATTACGAGGAGGCTTGG
ATTGAAAAATCATCTCTGTTGGGAATTTCTCAAGAGGTGTGAGCGCCTCCTTCTCTCTGT
TCTTTCTGATTGTAGGTTCGGGTGTTATCTTCCTTCTGTAATCGCCACCGCCATAATGCT
GCATGTCATCGATAGCGTAGAACCCTGCATTCGTGTCCAATACCAGAGCCAGCTACTGGG
TATTCTCGGAATTGATAAGGACAAAGTAGAGGATTGCAGTCAGCTCATCCTGGATATAGC
ATCGAGTGCCCGTTGTCACCATCACAATAAACGCAAGTTTGCCTCCACACCGGGCAGTCC
AAATGGCGTTATGGATGGATGGTTCAGCTGCGACAGCTCAAATGATTCATGGGCTGTAGC
GGTTTCTTCCTCGCCTTCCTCATCGGAGCATTTGTCCAAGAAGAGTAGAGGTCAGGAGCA
GCATCTGCAGACTCTCAACCAAGCTACTGCTGATGCCCCGACGGTCATTCCTCGCTAGTT
CCTCAATTCCCCCTTTCTCATGGACTAGTCTGTCTTATATGTTAAATAATGTATATGTTC
TTTTGATGTGCCTTGTTAAATTGCCTACCATCTCTGCATTTCCACCCAAATCCAACTCAT
TGGATCATGGATACGCCCTGCTATCATCTCTACGAGCGATGGATGTTGAGATTCGGAAGC
AGAGATAGCTGGCATTTTATCCGGATGAAAGTAAAGAACATAAGCATAGCAATGAAGAAG
AGCATTTGAATATGTAACTCACTCTCTTGTATGAGCATAATTCTATAATAGTAACTTGCA
TAGCTTATAATTATCTTTGATTATTTCCTGTACATATAAAAAATGTCTCAAATATGGATA
TGGAGAATGGAGCATAGCGAGATGTGGCTTAATGTTTTGGCTGTAACAGCAGAAACGAGG
AAGGCGAAATGGAAATCCATGGGAAGTTGTTTGCATGTGAAAGGAGGAAGGTGTTGTCGG
CCATTGGCATTTTTATGGTTTTTTTTTGGGACCATTATGTGGTGTTTGACCTCGTTTTTG
TGAGACTCTGTTTGAAAGGAGGGCACTAATGTCCTGGACTGGACTATAGACTTACCTACC
CAGCTGAGAAACACCGACCTTTTCTTGATTTTTATTCACACTCTTCCTCTCCCTTTCTTC
TTCAACTTGTCTAAAGTTATTGGCTGTTATAACTTGCATCAATGGAGCTTAATCTGAGTT
AACAGA