Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g09700.t01
CDS Infomation

cds chromosome:12X:18:8077244:8078167:1 gene:VIT_18s0001g09700 gene_biotype:protein_coding transcript_biotype:protein_coding description:SLEEPY1b [Source:UniProtKB/TrEMBL;Acc:F6GZW7]
Sequence

ATGAAGCGACCTTTTGTTGCCGACGATGATCTGGAAAGCGCAGATCAGAAGATGAAGAAT
CCAAAGCTTGAAGATGATGAAGAGGACGGGGAGGTTAGGGGAGAGACAACGGGGTTTGTG
AATCTGGACGAGAATCTGCTGTACGAGGTGCTCAAGCACGTGGACGCACGTACTCTGGCC
ATCGCTGGGTGCGTTAGCAAGCTCTGGCACAGAACGTCCCAGGACGAGCGGCTCTGGGAG
CTGATCTGTACCAGACACTGGGCTAATATCGGCTGCGGCAACCAACAGGTCCGATCTGTG
GTTCTCGCTCTCGGAGGTTTTCGTCGTCTCCACTCTCTCTACCTCTGGCCGCTGTCCAAG
CCCCAGGCTTCCTCATCATCTTCGCCGCCGTCGTCATCGTGGCCGTCGACTGCACTATCG
CCTCCGTTTGCGCCGCATTCGATGATGCGGCCCAAGTTCCCAACTCGCTGGGGAAAAGAC
GAGGTCCATCTTTCCCTGTCTCTTCTCTCAATTCGTTACTACGAAAAGATGAATTTCAAC
AACAGAGGGAGATGA

Peptide Sequence

PEP ID

VIT_18s0001g09700.t01
PEP Infomation

pep chromosome:12X:18:8077244:8078167:1 gene:VIT_18s0001g09700 transcript:VIT_18s0001g09700.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:SLEEPY1b [Source:UniProtKB/TrEMBL;Acc:F6GZW7]
Sequence

MKRPFVADDDLESADQKMKNPKLEDDEEDGEVRGETTGFVNLDENLLYEVLKHVDARTLA
IAGCVSKLWHRTSQDERLWELICTRHWANIGCGNQQVRSVVLALGGFRRLHSLYLWPLSK
PQASSSSSPPSSSWPSTALSPPFAPHSMMRPKFPTRWGKDEVHLSLSLLSIRYYEKMNFN
NRGR

Transcript Sequence

Transcript ID

VIT_18s0001g09700.t01
Transcript Infomation

cdna chromosome:12X:18:8077244:8078167:1 gene:VIT_18s0001g09700 gene_biotype:protein_coding transcript_biotype:protein_coding description:SLEEPY1b [Source:UniProtKB/TrEMBL;Acc:F6GZW7]
Sequence

ACCTGCAACCGCCTCGTTATTCCCTCTTCTCCGCCACTCTACATTCATTTTCCTCTCTTT
CTTTTTCCCCTTTTTTCACCTTTGCCTCTTTTATTGATTCATTAATAAATCATCCAAAAA
CAGTCCCGGATTTGGGAATTCATTTCCTTTGTCCATGAAGCGACCTTTTGTTGCCGACGA
TGATCTGGAAAGCGCAGATCAGAAGATGAAGAATCCAAAGCTTGAAGATGATGAAGAGGA
CGGGGAGGTTAGGGGAGAGACAACGGGGTTTGTGAATCTGGACGAGAATCTGCTGTACGA
GGTGCTCAAGCACGTGGACGCACGTACTCTGGCCATCGCTGGGTGCGTTAGCAAGCTCTG
GCACAGAACGTCCCAGGACGAGCGGCTCTGGGAGCTGATCTGTACCAGACACTGGGCTAA
TATCGGCTGCGGCAACCAACAGGTCCGATCTGTGGTTCTCGCTCTCGGAGGTTTTCGTCG
TCTCCACTCTCTCTACCTCTGGCCGCTGTCCAAGCCCCAGGCTTCCTCATCATCTTCGCC
GCCGTCGTCATCGTGGCCGTCGACTGCACTATCGCCTCCGTTTGCGCCGCATTCGATGAT
GCGGCCCAAGTTCCCAACTCGCTGGGGAAAAGACGAGGTCCATCTTTCCCTGTCTCTTCT
CTCAATTCGTTACTACGAAAAGATGAATTTCAACAACAGAGGGAGATGAATTGTCATGAT
CATACCCTTACTACTCTATAATCGCCCTAAATTTGGCTTTGTTCCTCTTTTTTTTTTCCA
CGATTGTAATCTATATCGGCTTGCTCAACCAGATCCGCGTCCTTCCTATGAATTAATTGT
TGTTCTTTTCTTGATTTCTGAGTTTGTTGTATAAAATGAGATAATGAAAATTGCTTTGCA
TTTGAATGTTAATACTTAATATGC