Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g09490.t01
CDS Infomation

cds chromosome:12X:18:7935682:7940534:-1 gene:VIT_18s0001g09490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGACTCCTGAGCCATCACAGCAAGAACCGCCCAACGGAGACGGCAAAGATGAGGAA
GCAAATCGTCTCTTGCCCTCAAAATCTCCTTCGTCACTGTCGCCATCATCGGACGAGGAG
GAGGTCGCGTACGAATCTAGAGAGAAAATATCAATCGTCGATTTGGAAGGCGAAACCCTA
GAGTCCCTCGATGCCTCCGCGACTCCGCCCTTCTCGTGGAAGAAGCTGTGGCTATTCACG
GGACCAGGGTTCCTGATGAGCATTGCGTTCCTAGATCCCGGAAACCTTGAAGGGGATCTT
CAGGCGGGAGCCATTGCAGGGTACTCGCTGCTATGGCTATTGATGTGGGCGACGGTTATG
GGGCTCTTGATCCAGTTATTGTCGGCGAGGGTTGGGGTGGCCACGGGGCGGCATCTTGCC
GAGCTCTGTAGGGAAGAGTATCCGACATGGGCTGGGCGGTTGTTGTGGTTCATGGCGGAG
TTGGCCTTGATCGGGGCTGATATCCAGGAGGTGATTGGTAGTGCCATTGCAATTAAGATT
CTTAGCCGTGGATTTCTTCCGCTTTGGGCTGGAGTTGTAATTACTGCGTCCGATTGTTTT
ATCTTTTTGTTTCTTGAAAACTATGGAGTGAGGAAGTTGGAAGCTGTTTTTGCAGTTTTC
ATTGCAACAATGGGACTTTCATTTGCCTGGATGTTTGGTGATGCAAAGCCCAGTGGAAGG
GAACTTCTGATAGGTGTTTTGGTTCCAAAACTTAGCTCAAAAACAATTCGGCAGGCAGTG
GGAGTTGTTGGTTGTGTTATAATGCCTCATAATGTATTTTTGCATTCTGCTTTGGTACAG
TCCAGGAAGATTGACCCCCACAGAAAAGGTCGGGTTCAAGAGGCACTCAACTACTATTCA
ATTGAGTCGACAGTTGCCCTTCTAATCTCTTTCATGATCAATTTGTTTGTGACAACTGTT
TTTGCAAAGGGATTTTATGGTACTAAACAGGCCGATGGAATAGGCCTAGTAAATGCAGGG
CAGTATCTTGAAGAGAAGTATGGGGGAGGTGTTTTCCCAATACTTTATGTCTGGGGTATT
GGACTATTGGCAGCTGGACAGAGTAGTACCATAACTGGCACATATGCTGGGCAATTTATC
ATGGGAGGCTTTCTCAATCTCCGTCTGAAGAAATGGCTAAGGGCATTGATAACACGTAGT
TTTGCTATTGTGCCTACTATGATTGTAGCTCTTGTTTTCAACAGATCTGAAGCTTCACTG
GATGTTTTAAATGAATGGCTTAATGTACTTCAGTCAATGCAGATTCCTTTTGCACTTATT
CCCCTTCTTACTTTAGTGTCCAAGGAACAGGTTATGGGTGTCTTCAAGGTTGGACCACTT
TTAGAGAGAGTGGCGTGGACTGTGGCTGCCCTTGTAATAGTGATCAATGGGTATCTTCTG
CTGGATTTCTTCATGGCTGAAGTTGATGGAGTGCTATTTGGTTTTCTGGTCTGTGCTGGC
ACAGCTCTATATGTAGCATTTATTTTTTATCTTGTATCACATGGTGGTGTCCTTTCTTCT
ACTTGGTTCAGCTTAGTAACATCCAAGAGGTTTCCTTTCATTGGGAGTTGA

Peptide Sequence

PEP ID

VIT_18s0001g09490.t01
PEP Infomation

pep chromosome:12X:18:7935682:7940534:-1 gene:VIT_18s0001g09490 transcript:VIT_18s0001g09490.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MMTPEPSQQEPPNGDGKDEEANRLLPSKSPSSLSPSSDEEEVAYESREKISIVDLEGETL
ESLDASATPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATVM
GLLIQLLSARVGVATGRHLAELCREEYPTWAGRLLWFMAELALIGADIQEVIGSAIAIKI
LSRGFLPLWAGVVITASDCFIFLFLENYGVRKLEAVFAVFIATMGLSFAWMFGDAKPSGR
ELLIGVLVPKLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKIDPHRKGRVQEALNYYS
IESTVALLISFMINLFVTTVFAKGFYGTKQADGIGLVNAGQYLEEKYGGGVFPILYVWGI
GLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSFAIVPTMIVALVFNRSEASL
DVLNEWLNVLQSMQIPFALIPLLTLVSKEQVMGVFKVGPLLERVAWTVAALVIVINGYLL
LDFFMAEVDGVLFGFLVCAGTALYVAFIFYLVSHGGVLSSTWFSLVTSKRFPFIGS

Transcript Sequence

Transcript ID

VIT_18s0001g09490.t01
Transcript Infomation

cdna chromosome:12X:18:7935682:7940534:-1 gene:VIT_18s0001g09490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACTCACCACTCCTTGGGCCGGTTCAATTCCATGCCTACAGCTCACGTACGTCCCTCGGT
AGCGCACGATACCACACCTTCATCTTGTATAACTGGCCGGTGACCGGTGGTGGGACTCCG
AAGGTTACGAATTCCGCTGCCGCCATGATGACTCCTGAGCCATCACAGCAAGAACCGCCC
AACGGAGACGGCAAAGATGAGGAAGCAAATCGTCTCTTGCCCTCAAAATCTCCTTCGTCA
CTGTCGCCATCATCGGACGAGGAGGAGGTCGCGTACGAATCTAGAGAGAAAATATCAATC
GTCGATTTGGAAGGCGAAACCCTAGAGTCCCTCGATGCCTCCGCGACTCCGCCCTTCTCG
TGGAAGAAGCTGTGGCTATTCACGGGACCAGGGTTCCTGATGAGCATTGCGTTCCTAGAT
CCCGGAAACCTTGAAGGGGATCTTCAGGCGGGAGCCATTGCAGGGTACTCGCTGCTATGG
CTATTGATGTGGGCGACGGTTATGGGGCTCTTGATCCAGTTATTGTCGGCGAGGGTTGGG
GTGGCCACGGGGCGGCATCTTGCCGAGCTCTGTAGGGAAGAGTATCCGACATGGGCTGGG
CGGTTGTTGTGGTTCATGGCGGAGTTGGCCTTGATCGGGGCTGATATCCAGGAGGTGATT
GGTAGTGCCATTGCAATTAAGATTCTTAGCCGTGGATTTCTTCCGCTTTGGGCTGGAGTT
GTAATTACTGCGTCCGATTGTTTTATCTTTTTGTTTCTTGAAAACTATGGAGTGAGGAAG
TTGGAAGCTGTTTTTGCAGTTTTCATTGCAACAATGGGACTTTCATTTGCCTGGATGTTT
GGTGATGCAAAGCCCAGTGGAAGGGAACTTCTGATAGGTGTTTTGGTTCCAAAACTTAGC
TCAAAAACAATTCGGCAGGCAGTGGGAGTTGTTGGTTGTGTTATAATGCCTCATAATGTA
TTTTTGCATTCTGCTTTGGTACAGTCCAGGAAGATTGACCCCCACAGAAAAGGTCGGGTT
CAAGAGGCACTCAACTACTATTCAATTGAGTCGACAGTTGCCCTTCTAATCTCTTTCATG
ATCAATTTGTTTGTGACAACTGTTTTTGCAAAGGGATTTTATGGTACTAAACAGGCCGAT
GGAATAGGCCTAGTAAATGCAGGGCAGTATCTTGAAGAGAAGTATGGGGGAGGTGTTTTC
CCAATACTTTATGTCTGGGGTATTGGACTATTGGCAGCTGGACAGAGTAGTACCATAACT
GGCACATATGCTGGGCAATTTATCATGGGAGGCTTTCTCAATCTCCGTCTGAAGAAATGG
CTAAGGGCATTGATAACACGTAGTTTTGCTATTGTGCCTACTATGATTGTAGCTCTTGTT
TTCAACAGATCTGAAGCTTCACTGGATGTTTTAAATGAATGGCTTAATGTACTTCAGTCA
ATGCAGATTCCTTTTGCACTTATTCCCCTTCTTACTTTAGTGTCCAAGGAACAGGTTATG
GGTGTCTTCAAGGTTGGACCACTTTTAGAGAGAGTGGCGTGGACTGTGGCTGCCCTTGTA
ATAGTGATCAATGGGTATCTTCTGCTGGATTTCTTCATGGCTGAAGTTGATGGAGTGCTA
TTTGGTTTTCTGGTCTGTGCTGGCACAGCTCTATATGTAGCATTTATTTTTTATCTTGTA
TCACATGGTGGTGTCCTTTCTTCTACTTGGTTCAGCTTAGTAACATCCAAGAGGTTTCCT
TTCATTGGGAGTTGAGGGACTTAAAAAATATCATAATCATTCTGTCCACTGTCTGACAAA
TTTCAAAGAGGGCTATTCCCCCAATGGAAGCAGTTTTCTACAAGAAGCCTCTTTCTAACT
TTTGTGCATGGGTGATGTAAGTGTACAAATTTATGAAAAAGGTGAATCTTTTTTTAAATG
CACTTCTCCACATGCTGGAGGCACCGGGTTGCACTTTATGCTTTGGATCATCTGAAGATA
TTCTTTTCTCCATCCTAGAGGATGAACTAAACACATCCACCTGCCACAGGATAAAGGTAT
TTCTCTGCTCCAATTCTTGAAGGGGGGTTGGAGGGAAAGATTCAACGTAGCAAGTAAAAA
TTTTAGAATGAACCATTTAGTTTTCTTATGCTGTAACTGATGGATGTTATTGTATAGGGT
AGAATCGAATGGGCACTTGTTTCCAATCAAATAATGCAAAGGTGAAATGAATTTTGCCAA
TTTGTTGTGCACCAGTTAAA