Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g09390.t01
CDS Infomation

cds chromosome:12X:18:7874538:7878731:1 gene:VIT_18s0001g09390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGAGGAAGTGTTGGAGGCAAGTGGAGAGAGTGTTGGGAAGGGGAGGCGGAGATGAG
CTGCTGTGGCACATGGACTTGAAGCCTCATCCGTGTGGGGACTTGTCCATAGCCGTTGTT
CAAGCCAATTCTTCTCTAGAAGACCAAAGTCAAGTCTTCACTTGTCCCTCCGCTACCTTC
GTCGGCGTCTTCGACGGCCACGGCGGCCCTGAGGCCTCTCGCTTCCTCAACAGTCACCTC
TTCCCCCGTCTACATAGACTCGCTTCGGAGCAAGGCGGATTGTCTACGGATATAATTAAG
AAGGCATTCGATGACACTGAAGAGCAATTCTTGCATTTGGTGAAGCGATCTTGGCCTGCT
CGACCGCAGATTGCTTTGGTCGGATCGTGTTGTCTTGTTGGAGTAATTTCTAATGATGTG
TTGTATGTGGCCAATCTTGGGGACTCGAGGGCGGTTCTTGGCCGGAGAGTCTCCAGGGGG
GGGAAGAACATGATAGTGGCAGAACGATTATCCACTGATCATAATGTTGGAGATGAAGAG
GTGAGGAAGGAGGTTGAAGCACTCCATCCAGATGATGCGCATATAGTTGTAAATAATCGT
GGAGTTTGGCGGATTAAGGGTATAATTCAGGTGTCCAGATCTATTGGAGACATATATTTG
AAGAAACCTGAGTTTAACAGAGATCCCCTCTTCCAGCAGTTTGGATATCCCATTCCACTG
AAACGACCTGTAATGACTGCAGAACCCTCAATTCAAGTGAGGAAGTTGATATCAGAGGAC
TTATTTTTGATATTTGCATCAGATGGCCTTTGGGAGCAATTGAGCGATGAAGCAGTTGTG
GATATCGTCCACAAAAACCCAAGAGCTGGAATAGCCAAGCGATTGGTCACAGCTGCTCTT
CAGGAGGCAGCAAAGAAAAACGAAATTAAATACGATGAACTGAAAAAGACAAGTAAAGGG
TTGAGGCGTCACTTCCATGATGACATCACTGTTGTTGTGATGTATCTAGATCACCTCCAC
GGATCAGCTGGTGGTAGCAGATTCAAGGAAGGCTCTGTTGACTGCATCAGTGCTCCGGTT
GATATCTACTCTCTCAATGTGGATGAAGCAGAAGACCCACTTTATATGGATTCCTGA

Peptide Sequence

PEP ID

VIT_18s0001g09390.t01
PEP Infomation

pep chromosome:12X:18:7874538:7878731:1 gene:VIT_18s0001g09390 transcript:VIT_18s0001g09390.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLRKCWRQVERVLGRGGGDELLWHMDLKPHPCGDLSIAVVQANSSLEDQSQVFTCPSATF
VGVFDGHGGPEASRFLNSHLFPRLHRLASEQGGLSTDIIKKAFDDTEEQFLHLVKRSWPA
RPQIALVGSCCLVGVISNDVLYVANLGDSRAVLGRRVSRGGKNMIVAERLSTDHNVGDEE
VRKEVEALHPDDAHIVVNNRGVWRIKGIIQVSRSIGDIYLKKPEFNRDPLFQQFGYPIPL
KRPVMTAEPSIQVRKLISEDLFLIFASDGLWEQLSDEAVVDIVHKNPRAGIAKRLVTAAL
QEAAKKNEIKYDELKKTSKGLRRHFHDDITVVVMYLDHLHGSAGGSRFKEGSVDCISAPV
DIYSLNVDEAEDPLYMDS

Transcript Sequence

Transcript ID

VIT_18s0001g09390.t01
Transcript Infomation

cdna chromosome:12X:18:7874538:7878731:1 gene:VIT_18s0001g09390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGATGTTGAGGAAGTGTTGGAGGCAAGTGGAGAGAGTGTTGGGAAGGGGAGGCGGAGATG
AGCTGCTGTGGCACATGGACTTGAAGCCTCATCCGTGTGGGGACTTGTCCATAGCCGTTG
TTCAAGCCAATTCTTCTCTAGAAGACCAAAGTCAAGTCTTCACTTGTCCCTCCGCTACCT
TCGTCGGCGTCTTCGACGGCCACGGCGGCCCTGAGGCCTCTCGCTTCCTCAACAGTCACC
TCTTCCCCCGTCTACATAGACTCGCTTCGGAGCAAGGCGGATTGTCTACGGATATAATTA
AGAAGGCATTCGATGACACTGAAGAGCAATTCTTGCATTTGGTGAAGCGATCTTGGCCTG
CTCGACCGCAGATTGCTTTGGTCGGATCGTGTTGTCTTGTTGGAGTAATTTCTAATGATG
TGTTGTATGTGGCCAATCTTGGGGACTCGAGGGCGGTTCTTGGCCGGAGAGTCTCCAGGG
GGGGGAAGAACATGATAGTGGCAGAACGATTATCCACTGATCATAATGTTGGAGATGAAG
AGGTGAGGAAGGAGGTTGAAGCACTCCATCCAGATGATGCGCATATAGTTGTAAATAATC
GTGGAGTTTGGCGGATTAAGGGTATAATTCAGGTGTCCAGATCTATTGGAGACATATATT
TGAAGAAACCTGAGTTTAACAGAGATCCCCTCTTCCAGCAGTTTGGATATCCCATTCCAC
TGAAACGACCTGTAATGACTGCAGAACCCTCAATTCAAGTGAGGAAGTTGATATCAGAGG
ACTTATTTTTGATATTTGCATCAGATGGCCTTTGGGAGCAATTGAGCGATGAAGCAGTTG
TGGATATCGTCCACAAAAACCCAAGAGCTGGAATAGCCAAGCGATTGGTCACAGCTGCTC
TTCAGGAGGCAGCAAAGAAAAACGAAATTAAATACGATGAACTGAAAAAGACAAGTAAAG
GGTTGAGGCGTCACTTCCATGATGACATCACTGTTGTTGTGATGTATCTAGATCACCTCC
ACGGATCAGCTGGTGGTAGCAGATTCAAGGAAGGCTCTGTTGACTGCATCAGTGCTCCGG
TTGATATCTACTCTCTCAATGTGGATGAAGCAGAAGACCCACTTTATATGGATTCCTGAA
ACAAACAAGCTCACCCAAAGGTACATGATGGATTTGCTTGTGAATAGAACCAATAATCTA
TGATAGAGCGTATTTATACAATAGGTGCATCAAGCGCACAATGGATAGATAGTTTATATT
ATGAAAAAACAGCCATGTACATAATGGAGCCTCTAGGAGGGATGCCAGAGATGCAATTTG
CTGAGGAGTACTTAAGACTCAGGTTCTGGCCCGCATTCTACTTGGTTGCTTTGGTTGAGT
TCCTTCTGTATTAGTTTTCAATGATGGTTTGGATTGGCTAGATGGATTTGGTATGGCAGG
CTCCCGGAAGTACAAATGTCATAAGGTTTGAGTCTCCATTTTGCATTTTCATTTTTGGTC
TTTTAATGGAATATGGTATACGGAAATTTT