Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g09170.t01
CDS Infomation

cds chromosome:12X:18:7636205:7650575:1 gene:VIT_18s0001g09170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAAAGCGTAACTCTCAGCGTAAAAAGGTTTCACTGTTGGATAGTGACGATGATGAT
AGTGCGAGTTCTTCGTCCACTTCCCGGTCAGATCTTGTGCTGGCACAAGGAATTGAGGAT
GTCCAGCTTGATAAAGAGAGTTCACTAGATCAGGCTTTGGATGCTTTATATGAAAAAAGG
GGAACCACGAGAGAAAGGGCCTTGTCATCAATAATTGAGGCTTTTAGCAGCAACCTGCAG
CATCTGTTTGTGGAAAAGAAATTCGCTACATTGCTGCATCAGTGTTTGAATTCCATCAAG
CGAGGGTCTGCTAAAGAGGCATCTTTAGCATGTCATGCAATTGGATTGCTGGCTTTGACT
GTTGGTCATGGGGATAATGCACATGAGATATTGGAAGAATCAGTTCCTCCTATTTCACAG
GCTCTCAAATCTTCATCTGAATCATCAAAGATATCATGGTTATTGGAATGCTTGGCTATT
GTCACCTTCATTGGTGCAAATGATCCAGAAGAAACAGAAAGATCAATGCAAATTATGTGG
CAATTACTTCATCCAAAATTGGGTTCTAATGTGGTTGCCAGAAAACCTTCAGCAGAGGTA
ATAACAGCAGTGGTGTCTGCTTGGTCGTTTCTTCTTACAACCATGGATGGGTGGAAACTG
AATCCTAAAAATTGGCAAGGGTCAATTTCTTATTTTTCTAGTTTGCTAGATAAGGATGAT
CGATCTGTACGCATTGCAGCTGGTGAAGCATTGGCTCTTATTTTTGAAGTAGGAAGTTTA
GAGAAGTTCTTTATCGAACCTAAAGGTCCTAGTGACAGCTCAATTCATGAAGAGAATATT
CATCGGGAAGGATTTACACACATACAAGGACTTAAAGGGAAAATTCTAAATCAAGTGAGA
AACCTTTCAGTGGAAGCAGGTGGTAAAGGTTCTGTGAAGAAAGACCTTAACAGCCAGAGA
AACTCATTTAGAGATATATTAGAATTTCTTGAGGGTGGTTACTGTCCTGAAACCTCAATG
AAAATTGGTGGAGATTCACTGAACACATCAACATGGTCTCAACTGATACAGTTAAACTTT
CTGAAGCACTTTCTCAGGGGCGGATTTGTTAAGCACATGCAGGAAAATGAATTTCTTCAT
GAAGTCTTTGGTTTCACACCAAAAAGAAAGCATCTTTCGGGCAGTGAGCATCATTTATCT
AGTGGTGAAAAGAGGATGTACAAATCACCAAACTCAGTGGTCAATAAGGCAAGAACTCAG
TTGCTGAACAAACAGCGGATGTTGTCCCAGGGTAGGAAGCGACTTTGGGCAATGGATATT
ATGCCAGTTTTGGCAGAAAAGCCATGTCAATGGATGCGGGTAGAAACGCAGGCCATTATG
CAGTTGGTTTGGGTGATGAAGAGCTGTAGGTGCAATCTCTGGTTAAACAGCCGTTGCAAA
CTTAAAGCTGAATCATAG

Peptide Sequence

PEP ID

VIT_18s0001g09170.t01
PEP Infomation

pep chromosome:12X:18:7636205:7650575:1 gene:VIT_18s0001g09170 transcript:VIT_18s0001g09170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGKRNSQRKKVSLLDSDDDDSASSSSTSRSDLVLAQGIEDVQLDKESSLDQALDALYEKR
GTTRERALSSIIEAFSSNLQHLFVEKKFATLLHQCLNSIKRGSAKEASLACHAIGLLALT
VGHGDNAHEILEESVPPISQALKSSSESSKISWLLECLAIVTFIGANDPEETERSMQIMW
QLLHPKLGSNVVARKPSAEVITAVVSAWSFLLTTMDGWKLNPKNWQGSISYFSSLLDKDD
RSVRIAAGEALALIFEVGSLEKFFIEPKGPSDSSIHEENIHREGFTHIQGLKGKILNQVR
NLSVEAGGKGSVKKDLNSQRNSFRDILEFLEGGYCPETSMKIGGDSLNTSTWSQLIQLNF
LKHFLRGGFVKHMQENEFLHEVFGFTPKRKHLSGSEHHLSSGEKRMYKSPNSVVNKARTQ
LLNKQRMLSQGRKRLWAMDIMPVLAEKPCQWMRVETQAIMQLVWVMKSCRCNLWLNSRCK
LKAES

Transcript Sequence

Transcript ID

VIT_18s0001g09170.t01
Transcript Infomation

cdna chromosome:12X:18:7636205:7650575:1 gene:VIT_18s0001g09170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCATTTAAGCCCCCCTCTCTCTTTGTTTTTTCCCTGCCTCCAATCCAATCCTCAGAATC
TCATTCTACTCCCTAAAATTTTAATGGCTATTTCCTCACTGGATTTACATCTGTTGAATT
GTCGTTTGGTTTGGATTCAATCTCCTTTTACACATCTTTTCTTCGCTAAATCTTCGTCTC
ATCGTCACATTTCCAGTCAACTCTCTTCCTTTTTCTGACAAGCAAGAGGGGAGAGAGAAA
AACACCCATCACACATGGGAAAGCGTAACTCTCAGCGTAAAAAGGTTTCACTGTTGGATA
GTGACGATGATGATAGTGCGAGTTCTTCGTCCACTTCCCGGTCAGATCTTGTGCTGGCAC
AAGGAATTGAGGATGTCCAGCTTGATAAAGAGAGTTCACTAGATCAGGCTTTGGATGCTT
TATATGAAAAAAGGGGAACCACGAGAGAAAGGGCCTTGTCATCAATAATTGAGGCTTTTA
GCAGCAACCTGCAGCATCTGTTTGTGGAAAAGAAATTCGCTACATTGCTGCATCAGTGTT
TGAATTCCATCAAGCGAGGGTCTGCTAAAGAGGCATCTTTAGCATGTCATGCAATTGGAT
TGCTGGCTTTGACTGTTGGTCATGGGGATAATGCACATGAGATATTGGAAGAATCAGTTC
CTCCTATTTCACAGGCTCTCAAATCTTCATCTGAATCATCAAAGATATCATGGTTATTGG
AATGCTTGGCTATTGTCACCTTCATTGGTGCAAATGATCCAGAAGAAACAGAAAGATCAA
TGCAAATTATGTGGCAATTACTTCATCCAAAATTGGGTTCTAATGTGGTTGCCAGAAAAC
CTTCAGCAGAGGTAATAACAGCAGTGGTGTCTGCTTGGTCGTTTCTTCTTACAACCATGG
ATGGGTGGAAACTGAATCCTAAAAATTGGCAAGGGTCAATTTCTTATTTTTCTAGTTTGC
TAGATAAGGATGATCGATCTGTACGCATTGCAGCTGGTGAAGCATTGGCTCTTATTTTTG
AAGTAGGAAGTTTAGAGAAGTTCTTTATCGAACCTAAAGGTCCTAGTGACAGCTCAATTC
ATGAAGAGAATATTCATCGGGAAGGATTTACACACATACAAGGACTTAAAGGGAAAATTC
TAAATCAAGTGAGAAACCTTTCAGTGGAAGCAGGTGGTAAAGGTTCTGTGAAGAAAGACC
TTAACAGCCAGAGAAACTCATTTAGAGATATATTAGAATTTCTTGAGGGTGGTTACTGTC
CTGAAACCTCAATGAAAATTGGTGGAGATTCACTGAACACATCAACATGGTCTCAACTGA
TACAGTTAAACTTTCTGAAGCACTTTCTCAGGGGCGGATTTGTTAAGCACATGCAGGAAA
ATGAATTTCTTCATGAAGTCTTTGGTTTCACACCAAAAAGAAAGCATCTTTCGGGCAGTG
AGCATCATTTATCTAGTGGTGAAAAGAGGATGTACAAATCACCAAACTCAGTGGTCAATA
AGGCAAGAACTCAGTTGCTGAACAAACAGCGGATGTTGTCCCAGGGTAGGAAGCGACTTT
GGGCAATGGATATTATGCCAGTTTTGGCAGAAAAGCCATGTCAATGGATGCGGGTAGAAA
CGCAGGCCATTATGCAGTTGGTTTGGGTGATGAAGAGCTGTAGGTGCAATCTCTGGTTAA
ACAGCCGTTGCAAACTTAAAGCTGAATCATAGGGCACATGTTGGTCTTCTGGTACCAGAC
TTCTTGATAAACCCATCTTAATATAATTACCCTGGATGATAAAAGGGATCATTTTGATTA
ATTTAATAGTGGGTTTTAAGTACAAGATCATATTACTTATATTGTAACTCTGGTGATAAA
ATTCTTTTCTTCATATTCGAAAGTGAAAATAAAGAACTTCCTAAGTTTGGAATGC