Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g09100.t01
CDS Infomation

cds chromosome:12X:18:7574634:7580062:1 gene:VIT_18s0001g09100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGGAAGGATTTGGGAGATAGAGAAGCGGGTAAACTCCGCCCTTATTCCTTTTCCAAT
CGCATTACATCCGATCGCATCGCTTCTCTTCAACTTTCTAATTATAAAGAGATCGTCTCT
CCTCACAGAGGCGCTGTTAACTCCCTTCAGGTTGATTTGACAGAGGGGCGGTATTTATTA
TCCGGTGCATCAGATGCATCAGCTGCTGTTTATGATATTCAACGTGCCACAGAATATGAG
GGGGGTAGTCTGGTTGCAAAACACAAGAGCATTTTTGTTGTTGACAAGCAACATGAGCAT
GGACACAAGTATGCTATATCCTCAGCCATATGGTATCCCATTGACACAGGGCTGTTCATC
ACGGGTTCATATGATCATTACATCAATGTTTGGGATACAAATACCACACAGGTAGTGGTG
AATTTTAAAATGCCTGGAAAGATTTATAGGACTGCAATGTCTTCACTGGCGACAGCTCAC
ATGCTTATTGCTGCTGGAACCGAAGATGTTCAAGTTCGCCTTTGTGATATTGCTTCAGGA
GCTTTTGCTCACACTTTATCTGGTCATCGTGATGGTGTAATGACAGTTGAATGGTCTACT
TCTAGTGAGTGGGTTTTGGTAACTGGGGGATGTGATGGTGCAATACGATTTTGGGACATC
AGACGTGCTGGATGTTTTCTTGTTTTAGATCAGTCCCAATCACAGCTTGGTAGACGCCCA
CCTCTCCTTGAATGCTCTACTGCGAATAAGGCTCCAATGTCAAAGTCCTTTCCAGCAAGC
CAAAGTGTAAATGTTAGATCCCGTGCACCACAAAGGAAATTTGCTTATGGGAATGGTTCA
AAACAGTCAGCTACTGGTAGAACTTCAAGTCAAGCCAAGGGATTGGTCAGGCAGAGACTA
CATCCAGGGATGTTATCTAGTCAGGACCGTGCCACTTCTCATTATGGTGCTGTTACTGGA
TTAAAAGTAACTGACGATGGCATGTATCTTCTGAGTGCAGGTTCTGATTCAAGATTAAGG
TTGTGGGATATTATGTCCGGCTGCAACACACTAGTGAACTTTGAAACTGTGCGGCTACAA
ACCAGCAAAGCAATGCAGTTGGCTATAACTAATGATTCAGCACTTGTCTTTGTTCCTTGC
ATGACAGCCGTAAAAGCATTTGATGTCTGGTCAGGTAAGACAGCCATGACATTTCGTGGC
CACTACGAATATGTGAATTGTTGCTGGTTAAGCTTGCAGGATCAGGAATTATATACAGGC
GGCAATGATAGACAAATTCTTGTTTGGTCACCATCTAGATTGAATTTTGATGAAATGGAT
CATGGCAGCAGGGAAGAGCCGATTCATGCACAGGATCAGGATAATTGGAGCGATTGA

Peptide Sequence

PEP ID

VIT_18s0001g09100.t01
PEP Infomation

pep chromosome:12X:18:7574634:7580062:1 gene:VIT_18s0001g09100 transcript:VIT_18s0001g09100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MWKDLGDREAGKLRPYSFSNRITSDRIASLQLSNYKEIVSPHRGAVNSLQVDLTEGRYLL
SGASDASAAVYDIQRATEYEGGSLVAKHKSIFVVDKQHEHGHKYAISSAIWYPIDTGLFI
TGSYDHYINVWDTNTTQVVVNFKMPGKIYRTAMSSLATAHMLIAAGTEDVQVRLCDIASG
AFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRP
PLLECSTANKAPMSKSFPASQSVNVRSRAPQRKFAYGNGSKQSATGRTSSQAKGLVRQRL
HPGMLSSQDRATSHYGAVTGLKVTDDGMYLLSAGSDSRLRLWDIMSGCNTLVNFETVRLQ
TSKAMQLAITNDSALVFVPCMTAVKAFDVWSGKTAMTFRGHYEYVNCCWLSLQDQELYTG
GNDRQILVWSPSRLNFDEMDHGSREEPIHAQDQDNWSD

Transcript Sequence

Transcript ID

VIT_18s0001g09100.t01
Transcript Infomation

cdna chromosome:12X:18:7574634:7580062:1 gene:VIT_18s0001g09100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAACAGAGGAGTGAGGGGTAGGGGTAGGTGGAGTGAGAGAGGAATAGGGTTCGGGGGGTT
GCTGAGGTCGAAGATGCACCCAAAATGTGGAAGGATTTGGGAGATAGAGAAGCGGGTAAA
CTCCGCCCTTATTCCTTTTCCAATCGCATTACATCCGATCGCATCGCTTCTCTTCAACTT
TCTAATTATAAAGAGATCGTCTCTCCTCACAGAGGCGCTGTTAACTCCCTTCAGGTTGAT
TTGACAGAGGGGCGGTATTTATTATCCGGTGCATCAGATGCATCAGCTGCTGTTTATGAT
ATTCAACGTGCCACAGAATATGAGGGGGGTAGTCTGGTTGCAAAACACAAGAGCATTTTT
GTTGTTGACAAGCAACATGAGCATGGACACAAGTATGCTATATCCTCAGCCATATGGTAT
CCCATTGACACAGGGCTGTTCATCACGGGTTCATATGATCATTACATCAATGTTTGGGAT
ACAAATACCACACAGGTAGTGGTGAATTTTAAAATGCCTGGAAAGATTTATAGGACTGCA
ATGTCTTCACTGGCGACAGCTCACATGCTTATTGCTGCTGGAACCGAAGATGTTCAAGTT
CGCCTTTGTGATATTGCTTCAGGAGCTTTTGCTCACACTTTATCTGGTCATCGTGATGGT
GTAATGACAGTTGAATGGTCTACTTCTAGTGAGTGGGTTTTGGTAACTGGGGGATGTGAT
GGTGCAATACGATTTTGGGACATCAGACGTGCTGGATGTTTTCTTGTTTTAGATCAGTCC
CAATCACAGCTTGGTAGACGCCCACCTCTCCTTGAATGCTCTACTGCGAATAAGGCTCCA
ATGTCAAAGTCCTTTCCAGCAAGCCAAAGTGTAAATGTTAGATCCCGTGCACCACAAAGG
AAATTTGCTTATGGGAATGGTTCAAAACAGTCAGCTACTGGTAGAACTTCAAGTCAAGCC
AAGGGATTGGTCAGGCAGAGACTACATCCAGGGATGTTATCTAGTCAGGACCGTGCCACT
TCTCATTATGGTGCTGTTACTGGATTAAAAGTAACTGACGATGGCATGTATCTTCTGAGT
GCAGGTTCTGATTCAAGATTAAGGTTGTGGGATATTATGTCCGGCTGCAACACACTAGTG
AACTTTGAAACTGTGCGGCTACAAACCAGCAAAGCAATGCAGTTGGCTATAACTAATGAT
TCAGCACTTGTCTTTGTTCCTTGCATGACAGCCGTAAAAGCATTTGATGTCTGGTCAGGT
AAGACAGCCATGACATTTCGTGGCCACTACGAATATGTGAATTGTTGCTGGTTAAGCTTG
CAGGATCAGGAATTATATACAGGCGGCAATGATAGACAAATTCTTGTTTGGTCACCATCT
AGATTGAATTTTGATGAAATGGATCATGGCAGCAGGGAAGAGCCGATTCATGCACAGGAT
CAGGATAATTGGAGCGATTGACATTCCTTGCTACCTGAGATTATGTGGGTTTTACTTTTA
CATGTAACTTAACCTCTTAAATCTTGTATATTTATCGTCGCCTTTTGTATGTATTTTGTT
GTTGTTTGGTTGCTTTGGATATTTGATTCTAATAAATTCCCTATCAGAATGTCAGAATGG