Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g08960.t01
CDS Infomation

cds chromosome:12X:18:7484813:7486070:-1 gene:VIT_18s0001g08960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGCTTCTTGGCCGCCAGTCTCAGAAAGTCTTCTCGACTCTGCCGTCCTCCTTTTTCA
ATACCTCTCTGTTTTTCTTTATCAAACCAGCTTTTCTTACTACCCTACTCATCCCCTATT
GGAACACACCTTCATCGCTTTATTTGCTCCGATGCTGACCCTGAAACCCTAATCCCACCG
CCCCAATCCCCAAATCCTAAAACCCCAACCCCTCTACAAATGCAATTCGAATCGTGGATC
CACATGCTCAAACCCGGTTTCTCACCCTCCGATGTCGACGAGGCTTTGCGAGCTCAATCG
GACCCCGATCTTGCCCTCGACATTTTTCGGTGGACAGGTCAACAGCGCGGCTACAGGCAC
AACCATGTCACCTATCTCACTATGATAAAAATTGCTGTCTCCGGTAAGCGCTTCAGGCAT
GCCGAAACCCTAATTGAGGAAGTCATTGCCGGTGCATGCTCTGTCAGTGTGCCCCTCTAC
AATTCTATTATTCGATTTTGTTGCGGTCGTAAATTTCTTTTTAATCGTGCGTTCGATGTT
TACAAGAAAATGTTGAATTCCGAGGATTGTAAGCCCTCTTTGGAAACCTACACATTGTTG
TTGAATGCCCTTCTTAGGAAATTCAACAAATTGACTGTATGCTATGTTTATTTGCATGCT
GTCCGTTCATTAACCAAACAAATGAAGGTGTCAGGCGTAATACCAGATACATTTGCTTTG
AATATGATTATTAAAGCATACTCCAAGTGTCTTGAAGTTGATGAAGCAATTAGGGTTTTT
CGTGAAATGGGTTTGTATGGTTGCGAGCCAAATGCCTATACTTATGGCTATATTGCCAAT
GGGTTGTGTGAAAAGGGGAGGGTGAGTCAGGGTTTGGGGTTTTATAGGGAAATGAGGAGT
AAAGATTTGGTGCCTAGTAGTAGTACCTACGTGATTCTGATTTGTAGTCTTTCAATGGAG
AGGAGATTTGAAGAAGCTACGAAGATTTTGTTTGATATGTTGGGTAATTCTATGGCTCCT
GATTTGTTAACTTATAAAACACTCTTAGAAGGATTGTCCAGGGAAGGAAAGTGCAATGAT
GCTTTTGAACTTCTTGAAGATTTGAGGAAGAAGGATGCTTGGATGGGAGAGAAGACTTAC
AAGACCTTGGTGAAAGGGTTGCATTTTTTGAGTCAGGAGTAG

Peptide Sequence

PEP ID

VIT_18s0001g08960.t01
PEP Infomation

pep chromosome:12X:18:7484813:7486070:-1 gene:VIT_18s0001g08960 transcript:VIT_18s0001g08960.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGFLAASLRKSSRLCRPPFSIPLCFSLSNQLFLLPYSSPIGTHLHRFICSDADPETLIPP
PQSPNPKTPTPLQMQFESWIHMLKPGFSPSDVDEALRAQSDPDLALDIFRWTGQQRGYRH
NHVTYLTMIKIAVSGKRFRHAETLIEEVIAGACSVSVPLYNSIIRFCCGRKFLFNRAFDV
YKKMLNSEDCKPSLETYTLLLNALLRKFNKLTVCYVYLHAVRSLTKQMKVSGVIPDTFAL
NMIIKAYSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIANGLCEKGRVSQGLGFYREMRS
KDLVPSSSTYVILICSLSMERRFEEATKILFDMLGNSMAPDLLTYKTLLEGLSREGKCND
AFELLEDLRKKDAWMGEKTYKTLVKGLHFLSQE

Transcript Sequence

Transcript ID

VIT_18s0001g08960.t01
Transcript Infomation

cdna chromosome:12X:18:7484813:7486070:-1 gene:VIT_18s0001g08960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCGGCTCCTGCGGCTAACCTTGGATGCATCCTTTATTAGATTATAGTTACCGAGAAACA
TTGGGGAGAGGCAATCATGGGCTTCTTGGCCGCCAGTCTCAGAAAGTCTTCTCGACTCTG
CCGTCCTCCTTTTTCAATACCTCTCTGTTTTTCTTTATCAAACCAGCTTTTCTTACTACC
CTACTCATCCCCTATTGGAACACACCTTCATCGCTTTATTTGCTCCGATGCTGACCCTGA
AACCCTAATCCCACCGCCCCAATCCCCAAATCCTAAAACCCCAACCCCTCTACAAATGCA
ATTCGAATCGTGGATCCACATGCTCAAACCCGGTTTCTCACCCTCCGATGTCGACGAGGC
TTTGCGAGCTCAATCGGACCCCGATCTTGCCCTCGACATTTTTCGGTGGACAGGTCAACA
GCGCGGCTACAGGCACAACCATGTCACCTATCTCACTATGATAAAAATTGCTGTCTCCGG
TAAGCGCTTCAGGCATGCCGAAACCCTAATTGAGGAAGTCATTGCCGGTGCATGCTCTGT
CAGTGTGCCCCTCTACAATTCTATTATTCGATTTTGTTGCGGTCGTAAATTTCTTTTTAA
TCGTGCGTTCGATGTTTACAAGAAAATGTTGAATTCCGAGGATTGTAAGCCCTCTTTGGA
AACCTACACATTGTTGTTGAATGCCCTTCTTAGGAAATTCAACAAATTGACTGTATGCTA
TGTTTATTTGCATGCTGTCCGTTCATTAACCAAACAAATGAAGGTGTCAGGCGTAATACC
AGATACATTTGCTTTGAATATGATTATTAAAGCATACTCCAAGTGTCTTGAAGTTGATGA
AGCAATTAGGGTTTTTCGTGAAATGGGTTTGTATGGTTGCGAGCCAAATGCCTATACTTA
TGGCTATATTGCCAATGGGTTGTGTGAAAAGGGGAGGGTGAGTCAGGGTTTGGGGTTTTA
TAGGGAAATGAGGAGTAAAGATTTGGTGCCTAGTAGTAGTACCTACGTGATTCTGATTTG
TAGTCTTTCAATGGAGAGGAGATTTGAAGAAGCTACGAAGATTTTGTTTGATATGTTGGG
TAATTCTATGGCTCCTGATTTGTTAACTTATAAAACACTCTTAGAAGGATTGTCCAGGGA
AGGAAAGTGCAATGATGCTTTTGAACTTCTTGAAGATTTGAGGAAGAAGGATGCTTGGAT
GGGAGAGAAGACTTACAAGACCTTGGTGAAAGGGTTGCATTTTTTGAGTCAGGAGTAG