Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g08890.t01
CDS Infomation

cds chromosome:12X:18:7443710:7448485:-1 gene:VIT_18s0001g08890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGTAGTCGCCATGAGGGCAGGACAGCTTCATCTGAAATATTTGAAAATCAGTCCGAC
TGTGAAGATGAGAGTAAGGTGTGCTCAAAGGCAAGGCAAGGAAAGAAATTGTGGAGGAGA
GTGAGATGCCAGCTCGTTGAGTACCACTCATTACCTGGGTATTTGAGGGACAATGAATTC
ATCTTGGGTCATTACCGATCTGAATGGCCATTGAAGCAAGTAATCCTCAGCATCTTCACC
ATACACAATGAAACGCTCAATGTTTGGACGCATTTGATTGGTTTCTTCCTTTTCCTGTCG
CTAACCATATACACTGCAATGAGGGTTCCAGAGGTTGTGGATCTTCGTTCCTTTCAACAT
TTGCCAGACTTTCTTAGAAGAGCTGATCTGCACAACATTCGTTCAGTACTCTTGAATTGC
CTGCCTTCCTTACCCAACATGCCTAATCTTAATAGATTAACAGATGAGTTAAAGACGTCT
TTGCCTTCAATGGATTTTCTCTCATCACTTTCAGGTTGGCATGTTTTAGAACTTCTGTCC
AACTGCTTGCCTGAGCGGTTTTCGCCTACCAATCAAACAAGTGATTGTGTTCTGTGTGCA
GTGAAAGAAGGTGCAGCAAACTTGATAGCTCCCCTGATGTTCCAGCCAATCACAAGATGG
CCCTTTTTTGCCTTCTTAGGCGGTGCAATGTTCTGTTTGCTATCAAGCAGCATATGCCAC
CTCCTCTCTTGCCACTCAGAGCGCCTTTCCTACATAATGCTCAGACTTGACTATGCAGGC
ATCGCGGCCCTCATCTCCACCTCCTTCTACCCTCCTGTCTACTACTCATTTATGTGCAAC
CCCTTCTTTTGCAGGCTCTACTTGGGCTTTATAACAATATTTGGGATTGCCACCATTATT
TTCTCTCTCCTTCCAGTTTTCCAGAATCCTGAGTATCGCACTTTTCGTGCTTCTCTCTTC
TTTGGGATGGGTGTGTCAGGTGCAGCTCCTATACTTCATAAGCTGATTTTGTACTCGGAC
CAGCCAGAGGCACTCCAGACCACTGTTTATGAGATAGTAATGGGGGCGTTTTACGGGATT
GGAGCATTGATTTATGCAACAAGAATTCCGGAGCGGTGGAAGCCCGGCAGGTTTGATATT
GCTGGGCACAGTCACCAGCTTTTTCATGTGCTGGTTGTGGCGGGGGCTTACACCCACTAT
CATACTGGGCTGGTCTACCTCAAGTGGCGGGACTTGAAAGGCTGCTAG

Peptide Sequence

PEP ID

VIT_18s0001g08890.t01
PEP Infomation

pep chromosome:12X:18:7443710:7448485:-1 gene:VIT_18s0001g08890 transcript:VIT_18s0001g08890.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSSRHEGRTASSEIFENQSDCEDESKVCSKARQGKKLWRRVRCQLVEYHSLPGYLRDNEF
ILGHYRSEWPLKQVILSIFTIHNETLNVWTHLIGFFLFLSLTIYTAMRVPEVVDLRSFQH
LPDFLRRADLHNIRSVLLNCLPSLPNMPNLNRLTDELKTSLPSMDFLSSLSGWHVLELLS
NCLPERFSPTNQTSDCVLCAVKEGAANLIAPLMFQPITRWPFFAFLGGAMFCLLSSSICH
LLSCHSERLSYIMLRLDYAGIAALISTSFYPPVYYSFMCNPFFCRLYLGFITIFGIATII
FSLLPVFQNPEYRTFRASLFFGMGVSGAAPILHKLILYSDQPEALQTTVYEIVMGAFYGI
GALIYATRIPERWKPGRFDIAGHSHQLFHVLVVAGAYTHYHTGLVYLKWRDLKGC

Transcript Sequence

Transcript ID

VIT_18s0001g08890.t01
Transcript Infomation

cdna chromosome:12X:18:7443710:7448485:-1 gene:VIT_18s0001g08890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTTCTTTTATCTGTCGAAGATAATCTTGAAACTCAGGCTGTATTTTTCAATTTCAGTGA
AAATGAGTAGTCGCCATGAGGGCAGGACAGCTTCATCTGAAATATTTGAAAATCAGTCCG
ACTGTGAAGATGAGAGTAAGGTGTGCTCAAAGGCAAGGCAAGGAAAGAAATTGTGGAGGA
GAGTGAGATGCCAGCTCGTTGAGTACCACTCATTACCTGGGTATTTGAGGGACAATGAAT
TCATCTTGGGTCATTACCGATCTGAATGGCCATTGAAGCAAGTAATCCTCAGCATCTTCA
CCATACACAATGAAACGCTCAATGTTTGGACGCATTTGATTGGTTTCTTCCTTTTCCTGT
CGCTAACCATATACACTGCAATGAGGGTTCCAGAGGTTGTGGATCTTCGTTCCTTTCAAC
ATTTGCCAGACTTTCTTAGAAGAGCTGATCTGCACAACATTCGTTCAGTACTCTTGAATT
GCCTGCCTTCCTTACCCAACATGCCTAATCTTAATAGATTAACAGATGAGTTAAAGACGT
CTTTGCCTTCAATGGATTTTCTCTCATCACTTTCAGGTTGGCATGTTTTAGAACTTCTGT
CCAACTGCTTGCCTGAGCGGTTTTCGCCTACCAATCAAACAAGTGATTGTGTTCTGTGTG
CAGTGAAAGAAGGTGCAGCAAACTTGATAGCTCCCCTGATGTTCCAGCCAATCACAAGAT
GGCCCTTTTTTGCCTTCTTAGGCGGTGCAATGTTCTGTTTGCTATCAAGCAGCATATGCC
ACCTCCTCTCTTGCCACTCAGAGCGCCTTTCCTACATAATGCTCAGACTTGACTATGCAG
GCATCGCGGCCCTCATCTCCACCTCCTTCTACCCTCCTGTCTACTACTCATTTATGTGCA
ACCCCTTCTTTTGCAGGCTCTACTTGGGCTTTATAACAATATTTGGGATTGCCACCATTA
TTTTCTCTCTCCTTCCAGTTTTCCAGAATCCTGAGTATCGCACTTTTCGTGCTTCTCTCT
TCTTTGGGATGGGTGTGTCAGGTGCAGCTCCTATACTTCATAAGCTGATTTTGTACTCGG
ACCAGCCAGAGGCACTCCAGACCACTGTTTATGAGATAGTAATGGGGGCGTTTTACGGGA
TTGGAGCATTGATTTATGCAACAAGAATTCCGGAGCGGTGGAAGCCCGGCAGGTTTGATA
TTGCTGGGCACAGTCACCAGCTTTTTCATGTGCTGGTTGTGGCGGGGGCTTACACCCACT
ATCATACTGGGCTGGTCTACCTCAAGTGGCGGGACTTGAAAGGCTGCTAGAAATTGAATC
CTGCGAGGTTTCTTTGTTTGTGTATTGAGTAAAATGTGTAAGAAACTAATACCTCAACCT
TGGCTTACACCCACCACTTGTTGGCATACGCTCCTTGGTCAAATCAGGATTCTAGGGCCA
GAGTTGAATCTTGTGTTCTCCCTGCATGTAAACAGTAAACAGTAAACAGTAATAAGCTAA
TCCCCAATAGTAATTGGCACAGTGGACTTTCTATTG