Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_18s0001g08790.t01
CDS Infomation	cds chromosome:12X:18:7290566:7292458:-1 gene:VIT_18s0001g08790 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6H182]
Sequence	ATGCCGATGTACCAGCCATCTGGCCGGAGAAGAGATGGGGGTGTCATGTATGATGTGGGC GGCGACGGTGGGCATGTCTTAGATCTCGAAACCGCCGTGAAAGATGGGATTTTGGGGGGC GGAGGTGGGGTTGTTTGCGGCAGCGGAGTCACTGAGAAATTGGATCTGAAAAAGATGATT GAAGACCTGGACTCCATTGATGTTCCGTCTGTGTTCATATGCCCAATTTCGTTAGAGCCA ATGCAGGATCCTGTGACCATTTGCACTGGCCAGACCTACGAGAGATCCAACATCGTGAAA TGGTTCTCTATGGGGCACTTCACTTGCCCCACAACAATGCAAGAGCTTTGGGACGATTCC ATCACGCCAAACAAGACTCTTTACCAACTAATTTATAGTTGGTTTTCGCAGAAGTACTTG GTCATGAAGAAGAGATCAGAAGATGTGCAAGGCAGAGCATTGGAAGTCTTGGAGACGTTA AAGAAAGTTAAGGGTCAAGCTAGGATTCAAGCCCTCAAGGAACTTCGACAGGTTGTCTCA ATTCATGCTTCTGCCAAGAAGACGGTGGCAGACAATGGTGGTATCGGTCTGATTTCCTCT CTATTAGGCCCCTTCACTTCGCATGCAGTAGGGTCGGAAGTAATTGGGATTCTTGTGAAC TTGAGTCTCGATTCAGAATCAAAGTCAAATTTGATGCAGCCAGCAAAGATATCACTAATG GTGGACATGTTGAATGAGGGATCAATCGAGACCAAAATCAATTGTACAAAATTGATCGAA ATTTTGATGGAGGGGAGGGATTTTGAATCGGAGATTGTGCCAAGCTTGAGTCTTTTGGTT GGATTGTTGAGGTTGGTAAAGGATAAGAGGCACCAAAATGGGATCTTGGCTGGCCTCGCC CTGCTCAAGACAATTTGTTTACACGAGCCAGTGCGGAACTCAGTAGTGAGCATAGGGGCT GTTCCTCAATTGGTTGAGCTGTTGCCCAATTTGAATCCCGCGTGCCTGGAATTAGCCCTT TATATCCTGGAGGTTCTGTCAACTCTTCCACAGGGAAGATTGGCTTTGAAGGATTGCCCA AACATGATACCAAATGTAGTGAAATTATTGATGAGGGTTTCCGAGAGCTGTACCCAGTTG GCATTGGCCATCTTATCAGCAGTTTGCAAGCTTGCCCCAGAGGAATGTGCTTCACTTGCC GTGGAAGCTGGCCTTGCTGCGAAGCTCCTCCTCGTTATTCAGAGTGGTTGCAATCCTGTA TTGAAGCAAAGGGCTGCAGAGCTCTTAAAATTGTGTAGTCTAAATTACACGGCCACCATC TTCATATCCAAGTGTAAGCTTACAAGAACGATACAATGA

Peptide Sequence

PEP ID	VIT_18s0001g08790.t01
PEP Infomation	pep chromosome:12X:18:7290566:7292458:-1 gene:VIT_18s0001g08790 transcript:VIT_18s0001g08790.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6H182]
Sequence	MPMYQPSGRRRDGGVMYDVGGDGGHVLDLETAVKDGILGGGGGVVCGSGVTEKLDLKKMI EDLDSIDVPSVFICPISLEPMQDPVTICTGQTYERSNIVKWFSMGHFTCPTTMQELWDDS ITPNKTLYQLIYSWFSQKYLVMKKRSEDVQGRALEVLETLKKVKGQARIQALKELRQVVS IHASAKKTVADNGGIGLISSLLGPFTSHAVGSEVIGILVNLSLDSESKSNLMQPAKISLM VDMLNEGSIETKINCTKLIEILMEGRDFESEIVPSLSLLVGLLRLVKDKRHQNGILAGLA LLKTICLHEPVRNSVVSIGAVPQLVELLPNLNPACLELALYILEVLSTLPQGRLALKDCP NMIPNVVKLLMRVSESCTQLALAILSAVCKLAPEECASLAVEAGLAAKLLLVIQSGCNPV LKQRAAELLKLCSLNYTATIFISKCKLTRTIQ

Transcript Sequence

Transcript ID	VIT_18s0001g08790.t01
Transcript Infomation	cdna chromosome:12X:18:7290566:7292458:-1 gene:VIT_18s0001g08790 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6H182]
Sequence	TAAATTTTCTTGCTCTTCCGCAAAGTGGTTCAAAAATGCCGATGTACCAGCCATCTGGCC GGAGAAGAGATGGGGGTGTCATGTATGATGTGGGCGGCGACGGTGGGCATGTCTTAGATC TCGAAACCGCCGTGAAAGATGGGATTTTGGGGGGCGGAGGTGGGGTTGTTTGCGGCAGCG GAGTCACTGAGAAATTGGATCTGAAAAAGATGATTGAAGACCTGGACTCCATTGATGTTC CGTCTGTGTTCATATGCCCAATTTCGTTAGAGCCAATGCAGGATCCTGTGACCATTTGCA CTGGCCAGACCTACGAGAGATCCAACATCGTGAAATGGTTCTCTATGGGGCACTTCACTT GCCCCACAACAATGCAAGAGCTTTGGGACGATTCCATCACGCCAAACAAGACTCTTTACC AACTAATTTATAGTTGGTTTTCGCAGAAGTACTTGGTCATGAAGAAGAGATCAGAAGATG TGCAAGGCAGAGCATTGGAAGTCTTGGAGACGTTAAAGAAAGTTAAGGGTCAAGCTAGGA TTCAAGCCCTCAAGGAACTTCGACAGGTTGTCTCAATTCATGCTTCTGCCAAGAAGACGG TGGCAGACAATGGTGGTATCGGTCTGATTTCCTCTCTATTAGGCCCCTTCACTTCGCATG CAGTAGGGTCGGAAGTAATTGGGATTCTTGTGAACTTGAGTCTCGATTCAGAATCAAAGT CAAATTTGATGCAGCCAGCAAAGATATCACTAATGGTGGACATGTTGAATGAGGGATCAA TCGAGACCAAAATCAATTGTACAAAATTGATCGAAATTTTGATGGAGGGGAGGGATTTTG AATCGGAGATTGTGCCAAGCTTGAGTCTTTTGGTTGGATTGTTGAGGTTGGTAAAGGATA AGAGGCACCAAAATGGGATCTTGGCTGGCCTCGCCCTGCTCAAGACAATTTGTTTACACG AGCCAGTGCGGAACTCAGTAGTGAGCATAGGGGCTGTTCCTCAATTGGTTGAGCTGTTGC CCAATTTGAATCCCGCGTGCCTGGAATTAGCCCTTTATATCCTGGAGGTTCTGTCAACTC TTCCACAGGGAAGATTGGCTTTGAAGGATTGCCCAAACATGATACCAAATGTAGTGAAAT TATTGATGAGGGTTTCCGAGAGCTGTACCCAGTTGGCATTGGCCATCTTATCAGCAGTTT GCAAGCTTGCCCCAGAGGAATGTGCTTCACTTGCCGTGGAAGCTGGCCTTGCTGCGAAGC TCCTCCTCGTTATTCAGAGTGGTTGCAATCCTGTATTGAAGCAAAGGGCTGCAGAGCTCT TAAAATTGTGTAGTCTAAATTACACGGCCACCATCTTCATATCCAAGTGTAAGCTTACAA GAACGATACAATGAAAAGACCATGGGAAATTTGTTCATACAAACTCTCATTTCCCCTCCG GCCGTGGGGGACAAAGGTGCAAAGAGCTTGTGGGACTCAAACAGATTTCTTAACAATGTG AAATGGGGTTTATGAGGTACTCCTGTGTATACTTGAGGACTTTGATTTTGTCATTTGATT TCACAAGAAGAAGCATCATAATGTGGAGTTTTCAGCTTGTTTGCCGACAGGGATACAGTC GATTACATGATTGATTCATTTCACAACAGAGCATCATAACCATACTACTGGGGTGGAGTT TGGATGGGGTTTGGGATGTAAGAATACATGAAGAGGGAAGGGGGAGGAAGGGAATTCTAG TAGGCTTGTTTCTTCAATTGTAATTGTATTTAGTTTTATTTGGTTGCCATGTCCCATTGA TCCCTAATTTTTGCTTTGTTCTTTTGAAGGGATTTGTGGGGTTTAGATTTTGTCATTTGG GTTGGAAGTGGTGTTAACACTTTTAGTCCTGCC