Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g08780.t01
CDS Infomation

cds chromosome:12X:18:7278449:7282584:-1 gene:VIT_18s0001g08780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCATGGTTGGCTCGATCGCTGGCCAACTCTCTCCGTCTAGACGATGACCGTGACGGT
GAAGGTGAGGATGATGGTGACGACACAACCATCCCTGAGACCAGAGAAGAAAAGAATACG
GAGGAACCAGAGTTGGATCAACACGGCCGAGGCGTCAAAGAAGACCTCACCGAATTCAAA
CAAACCCTAACTCGTCAGCTGTGGGGCGTCGCCTCGTTTCTTGCTCCTCCTCCTCCTGCA
CAGTCCTCCGCGCCATCTAATCCTCACGACGTTGAATCAATCTCCGATCTTGAACAATGC
GAGCCCTCCGATCAGTCCGTTTCCGGTGAAATTTCCGACGAGGAGACGTTCGATTCCGTT
GGTATCCGCGACGATATCGCAGGGATCGGGGGACGATTCAGGCCAGAGATCTCGAATCCA
TCGAATAATAGAGCGGTTTCAGAGATTTCGGAGATGGATTCGAATTTTCTGCCGTTTCGA
TCGGACGGCCGGGATTCGGTGGAGGAGTACGATTTCGAGGGCATCCCTGGGATCACCGAG
GAGGTTTTGGCTTTCGCGAGGAACATTGCGCATCATCCTGAGACTTGGTTGGATTTTCCT
TTGGAGGAGGAAGACGACCTGGATGATTTTGACATGTCCGACGCTCAGGAAGATCATGCT
TTGGCCATTGAACATCTTGCACCTAGATTAGCTGCTCTCCGTATTGAACTGTGTCCTAGC
CATATGAGCAAGGGCTATTTTTGGAAGATCTATTTTGTTCTCCTGCATTCAAGACTTAAT
AGACAAGATGCAGAGCTTTTGTCAACACCTCAGATTGTGGCAGCTAGAGCAATGTGGATG
CAGGAACTACAAAAGAAAACAAAGCCAGAACCAGACTGGTCCGGAAGAAGCACTTACTAT
TCAAAAGAGAGCACTAGTTTACATCAGGAGGATTCTGCCTCCACCAATAATTCTCATTCT
GAAAACATGCCATTCAGGACATTTGCTTTGGAACCTGTCAGTTTCCCTGTGACAACTGAT
TTGGAGACTGAGAAGTACACGCTTGCAAATAGCGAATCTCAAATCAGTGATAAGTCTGTC
ATTGAAGAAAAGCCAGAGGTCAGAACCAAGGATTTTCTCCCTGGTCCATCCTCTAAAGTA
TTGATTCAGAACTACGAGGATGATGAGGATGATTGGCCGGAGGATGAAATCTTAGAATTA
GGTGCCTACAGTAGAACTGTCATCCCCGTGGGACATGAAGAAGATGTATCTTTCAGTGAT
CTTGAAGATGATGATTGTATTATACCTATAAAATCCAAGTAG

Peptide Sequence

PEP ID

VIT_18s0001g08780.t01
PEP Infomation

pep chromosome:12X:18:7278449:7282584:-1 gene:VIT_18s0001g08780 transcript:VIT_18s0001g08780.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSWLARSLANSLRLDDDRDGEGEDDGDDTTIPETREEKNTEEPELDQHGRGVKEDLTEFK
QTLTRQLWGVASFLAPPPPAQSSAPSNPHDVESISDLEQCEPSDQSVSGEISDEETFDSV
GIRDDIAGIGGRFRPEISNPSNNRAVSEISEMDSNFLPFRSDGRDSVEEYDFEGIPGITE
EVLAFARNIAHHPETWLDFPLEEEDDLDDFDMSDAQEDHALAIEHLAPRLAALRIELCPS
HMSKGYFWKIYFVLLHSRLNRQDAELLSTPQIVAARAMWMQELQKKTKPEPDWSGRSTYY
SKESTSLHQEDSASTNNSHSENMPFRTFALEPVSFPVTTDLETEKYTLANSESQISDKSV
IEEKPEVRTKDFLPGPSSKVLIQNYEDDEDDWPEDEILELGAYSRTVIPVGHEEDVSFSD
LEDDDCIIPIKSK

Transcript Sequence

Transcript ID

VIT_18s0001g08780.t01
Transcript Infomation

cdna chromosome:12X:18:7278449:7282584:-1 gene:VIT_18s0001g08780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAATGTCATGGTTGGCTCGATCGCTGGCCAACTCTCTCCGTCTAGACGATGACCGTGACG
GTGAAGGTGAGGATGATGGTGACGACACAACCATCCCTGAGACCAGAGAAGAAAAGAATA
CGGAGGAACCAGAGTTGGATCAACACGGCCGAGGCGTCAAAGAAGACCTCACCGAATTCA
AACAAACCCTAACTCGTCAGCTGTGGGGCGTCGCCTCGTTTCTTGCTCCTCCTCCTCCTG
CACAGTCCTCCGCGCCATCTAATCCTCACGACGTTGAATCAATCTCCGATCTTGAACAAT
GCGAGCCCTCCGATCAGTCCGTTTCCGGTGAAATTTCCGACGAGGAGACGTTCGATTCCG
TTGGTATCCGCGACGATATCGCAGGGATCGGGGGACGATTCAGGCCAGAGATCTCGAATC
CATCGAATAATAGAGCGGTTTCAGAGATTTCGGAGATGGATTCGAATTTTCTGCCGTTTC
GATCGGACGGCCGGGATTCGGTGGAGGAGTACGATTTCGAGGGCATCCCTGGGATCACCG
AGGAGGTTTTGGCTTTCGCGAGGAACATTGCGCATCATCCTGAGACTTGGTTGGATTTTC
CTTTGGAGGAGGAAGACGACCTGGATGATTTTGACATGTCCGACGCTCAGGAAGATCATG
CTTTGGCCATTGAACATCTTGCACCTAGATTAGCTGCTCTCCGTATTGAACTGTGTCCTA
GCCATATGAGCAAGGGCTATTTTTGGAAGATCTATTTTGTTCTCCTGCATTCAAGACTTA
ATAGACAAGATGCAGAGCTTTTGTCAACACCTCAGATTGTGGCAGCTAGAGCAATGTGGA
TGCAGGAACTACAAAAGAAAACAAAGCCAGAACCAGACTGGTCCGGAAGAAGCACTTACT
ATTCAAAAGAGAGCACTAGTTTACATCAGGAGGATTCTGCCTCCACCAATAATTCTCATT
CTGAAAACATGCCATTCAGGACATTTGCTTTGGAACCTGTCAGTTTCCCTGTGACAACTG
ATTTGGAGACTGAGAAGTACACGCTTGCAAATAGCGAATCTCAAATCAGTGATAAGTCTG
TCATTGAAGAAAAGCCAGAGGTCAGAACCAAGGATTTTCTCCCTGGTCCATCCTCTAAAG
TATTGATTCAGAACTACGAGGATGATGAGGATGATTGGCCGGAGGATGAAATCTTAGAAT
TAGGTGCCTACAGTAGAACTGTCATCCCCGTGGGACATGAAGAAGATGTATCTTTCAGTG
ATCTTGAAGATGATGATTGTATTATACCTATAAAATCCAAGTAGCCTCAAGGGGTTGTGA
TGCTTTTACAAGAAACCCATGCTTCAATTCAGCTAAGCAAAGGCTCTGCTGACCCATCAA
AGGATGGATCTGTACAGTCGTATGATAAATGGACATGGGAACTAAAGAGTCAGAGCACTT
ACTGAGCTTCCATGACTGAAGTTGAAGCATATTCTCTTGCATGATGAAAGCCAAATCAAG
TTTTCATAGAGCAATTATGTGTTGATTGATTGTGTGAGGATTGTCGTCTGGTTACCTGTA
AAAATCCTTGATTGAGACAATATATGTTGTTAAAAGCATGAAAGCTTCTTTGATTCAATT
CATAGATTCGCCTTCCCAATTGGGATGCAATAGCTGATTATTAGTAAGGTTTGACTTTTG
ATGGCAAAATCAGCTTGCAGATCTGAGGATGGATCAGCCAATTGTAATTGAGACTCCTTT
AGCCTGAGATAATTGCATATCCAAAGATGAGGTTCACATTTGTGCC