Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g08650.t01
CDS Infomation

cds chromosome:12X:18:7086494:7089975:1 gene:VIT_18s0001g08650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTTTGGGGTGATGGGTTTGGATGGGTTGGTGGGTTCAGACACTGGTTTAGCTTCT
CTTGGTTCAGATCCTGAGACCAAGCAAAAGTGGTACGGATCTGGGTTCCTCAAGCAAGAG
AGATCTGGGGCTACTGAAGATGATTGGAAGAGCTTAAAGATTGCCAAAACTGATGATTTC
TCAGCCTCCAAGGCAATGCTGCTTCCACACAGAAATGCTTTACTGAGATCTAATACCACT
CTCTTCTCTGATGCTGGTCAGCAAGAACAGCAGATGCTCAGCTTCTCTTCTCCCAAATCA
GAACCTCTATTTATGGAGAGGAGCTCTCAGAATGCCATATTTCCCTACTATCACCACACA
TCCTCTGCTTATAATAGAAATACAGGTTACAGCTCTGGGAACTTGAATGGTGGAAGCATG
CATGGGGTTATGGCAGGGGTTAGAGGGCCATTCACCCAATCTCAATGGATGGAGCTAGAA
CACCAGGCCTTGATCTACAAGTACATCACTGCAAATGTGCCTATACCATCAAACTTGCTC
ATGCCCATCAGAAAAGCCCTTGATTCCGTTGGGTTCTCTACCTTTTCTGCCGGAGCTCTC
AGACCCAATACATTGGGATGGGGTTCTTTCCATCTGGGTTTCTCCAACAATACCGATCCT
GAGCCAGGACGATGTCGGAGGACTGATGGGAAGAAATGGCGGTGCTCAAGAGATGCAGTT
GCCGATCAGAAGTATTGTGAGCGGCACATGAACAGGGGCCGTCATCGTTCAAGAAAGCCT
GTGGAAGGCCAAACCGGCCATTCCGTCCCCGGACCCACCACCACTGCCACAAAGCTGATG
CCTATTACTTCCTCTTCATCAGCATCAGTGGTGCCCGGTGGCGGCACATCCAACAGCCTT
GCCATTGCGCATCACCAGATCAAGAATTTGCATCCAGGTGCATCTAATCCTTCTGCAGCC
ACCCCTATCAATAGGATATTTTTGAACAAAGAGAATGTGGGTGAGAGAATGCAAGAGACA
CAAGGCCTATCCATCTTATCTTCCACCATTGACCAGAAATCTAAAGAAAACCAATTCTCC
TTGCCAAAACAGCAGATCCCATATGAAGAATCCTCTCGAGCTGGGTTTGGTCTCGTCCCC
TCCAACTCCCTCCTCAGTAAAAGCTCCTCCTTCATGAACTGCAGAAACTTTGGTTCTTCC
CAAGACCTCAACAACCATGAGCCTGACTCACAACATTCCCTTCGCCATTTTATAGATGAC
TGGCCCAAAAACCAGTCAGACCGGACTGCCATTTCTTGGCCTGATATTGATTTGCAATCA
GATAGGACCCAGCTCTCAATTTCAATCCCCATGGCTTCCTCAGACTTCATGTCTTCCACT
TCCTCACCCACAAATGACAAACTCACGCTCTCACCACTGAGATTATCACGTGAATTTGAC
CCGATTCAAATGGGCTTGGGAGTGGGAAGTGTCCTCAATGAACCAAACCAAAGGCAAGCC
AATTGGATTCCCATCTCTTGGGAAACTTCCATGGGAGGACCTCTAGGAGAGGTTCTGCAC
AGCACTAATAACAATGGAGGGGACTGCAAGAACTCGTCAGCTCTTAACCTCATGACAGAG
GGTTGGGATGGCAGCCCACGACTAGGGTCATCCCCCACTGGTGTTTTACAGAAGACTTCA
TTTGGTTCACTTTCTAACAGCAGTGCGGGGAGCAGCCCAAGAGCAGGGAACAAGAAAACC
AATGATGGGGCTAGCCTTTGCAATGATCTACTCGGCTCAACCCTTGTTAATTCTTCCTCA
CTGCCATCCTTGTAA

Peptide Sequence

PEP ID

VIT_18s0001g08650.t01
PEP Infomation

pep chromosome:12X:18:7086494:7089975:1 gene:VIT_18s0001g08650 transcript:VIT_18s0001g08650.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDFGVMGLDGLVGSDTGLASLGSDPETKQKWYGSGFLKQERSGATEDDWKSLKIAKTDDF
SASKAMLLPHRNALLRSNTTLFSDAGQQEQQMLSFSSPKSEPLFMERSSQNAIFPYYHHT
SSAYNRNTGYSSGNLNGGSMHGVMAGVRGPFTQSQWMELEHQALIYKYITANVPIPSNLL
MPIRKALDSVGFSTFSAGALRPNTLGWGSFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAV
ADQKYCERHMNRGRHRSRKPVEGQTGHSVPGPTTTATKLMPITSSSSASVVPGGGTSNSL
AIAHHQIKNLHPGASNPSAATPINRIFLNKENVGERMQETQGLSILSSTIDQKSKENQFS
LPKQQIPYEESSRAGFGLVPSNSLLSKSSSFMNCRNFGSSQDLNNHEPDSQHSLRHFIDD
WPKNQSDRTAISWPDIDLQSDRTQLSISIPMASSDFMSSTSSPTNDKLTLSPLRLSREFD
PIQMGLGVGSVLNEPNQRQANWIPISWETSMGGPLGEVLHSTNNNGGDCKNSSALNLMTE
GWDGSPRLGSSPTGVLQKTSFGSLSNSSAGSSPRAGNKKTNDGASLCNDLLGSTLVNSSS
LPSL

Transcript Sequence

Transcript ID

VIT_18s0001g08650.t01
Transcript Infomation

cdna chromosome:12X:18:7086494:7089975:1 gene:VIT_18s0001g08650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AACATTTACTCCTAAACCAGAATGGTTTTGTGGAGCAGGCTTTAAGCTGAGCTGAAGCAA
AGGGAGAGGGCACACAGTGACCTAACTCTTAAATATGCACTACTCTTCAACTTCACAAGC
TTCAGTCAGTTTGTCTGATGACCCAATGCTTCTTTTCCTGAGTCTGGTGCTTCTGTAGGA
GGAGGTGGCTGGTGGGCGGTTTCTTTATGGATTTTGGGGTGATGGGTTTGGATGGGTTGG
TGGGTTCAGACACTGGTTTAGCTTCTCTTGGTTCAGATCCTGAGACCAAGCAAAAGTGGT
ACGGATCTGGGTTCCTCAAGCAAGAGAGATCTGGGGCTACTGAAGATGATTGGAAGAGCT
TAAAGATTGCCAAAACTGATGATTTCTCAGCCTCCAAGGCAATGCTGCTTCCACACAGAA
ATGCTTTACTGAGATCTAATACCACTCTCTTCTCTGATGCTGGTCAGCAAGAACAGCAGA
TGCTCAGCTTCTCTTCTCCCAAATCAGAACCTCTATTTATGGAGAGGAGCTCTCAGAATG
CCATATTTCCCTACTATCACCACACATCCTCTGCTTATAATAGAAATACAGGTTACAGCT
CTGGGAACTTGAATGGTGGAAGCATGCATGGGGTTATGGCAGGGGTTAGAGGGCCATTCA
CCCAATCTCAATGGATGGAGCTAGAACACCAGGCCTTGATCTACAAGTACATCACTGCAA
ATGTGCCTATACCATCAAACTTGCTCATGCCCATCAGAAAAGCCCTTGATTCCGTTGGGT
TCTCTACCTTTTCTGCCGGAGCTCTCAGACCCAATACATTGGGATGGGGTTCTTTCCATC
TGGGTTTCTCCAACAATACCGATCCTGAGCCAGGACGATGTCGGAGGACTGATGGGAAGA
AATGGCGGTGCTCAAGAGATGCAGTTGCCGATCAGAAGTATTGTGAGCGGCACATGAACA
GGGGCCGTCATCGTTCAAGAAAGCCTGTGGAAGGCCAAACCGGCCATTCCGTCCCCGGAC
CCACCACCACTGCCACAAAGCTGATGCCTATTACTTCCTCTTCATCAGCATCAGTGGTGC
CCGGTGGCGGCACATCCAACAGCCTTGCCATTGCGCATCACCAGATCAAGAATTTGCATC
CAGGTGCATCTAATCCTTCTGCAGCCACCCCTATCAATAGGATATTTTTGAACAAAGAGA
ATGTGGGTGAGAGAATGCAAGAGACACAAGGCCTATCCATCTTATCTTCCACCATTGACC
AGAAATCTAAAGAAAACCAATTCTCCTTGCCAAAACAGCAGATCCCATATGAAGAATCCT
CTCGAGCTGGGTTTGGTCTCGTCCCCTCCAACTCCCTCCTCAGTAAAAGCTCCTCCTTCA
TGAACTGCAGAAACTTTGGTTCTTCCCAAGACCTCAACAACCATGAGCCTGACTCACAAC
ATTCCCTTCGCCATTTTATAGATGACTGGCCCAAAAACCAGTCAGACCGGACTGCCATTT
CTTGGCCTGATATTGATTTGCAATCAGATAGGACCCAGCTCTCAATTTCAATCCCCATGG
CTTCCTCAGACTTCATGTCTTCCACTTCCTCACCCACAAATGACAAACTCACGCTCTCAC
CACTGAGATTATCACGTGAATTTGACCCGATTCAAATGGGCTTGGGAGTGGGAAGTGTCC
TCAATGAACCAAACCAAAGGCAAGCCAATTGGATTCCCATCTCTTGGGAAACTTCCATGG
GAGGACCTCTAGGAGAGGTTCTGCACAGCACTAATAACAATGGAGGGGACTGCAAGAACT
CGTCAGCTCTTAACCTCATGACAGAGGGTTGGGATGGCAGCCCACGACTAGGGTCATCCC
CCACTGGTGTTTTACAGAAGACTTCATTTGGTTCACTTTCTAACAGCAGTGCGGGGAGCA
GCCCAAGAGCAGGGAACAAGAAAACCAATGATGGGGCTAGCCTTTGCAATGATCTACTCG
GCTCAACCCTTGTTAATTCTTCCTCACTGCCATCCTTGTAACTGTTTGACCT