Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g08580.t01
CDS Infomation

cds chromosome:12X:18:7027174:7030736:1 gene:VIT_18s0001g08580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGCCATCCTTTGACTGGTGGACAAAGGAGAGTCACAGGGGGACGCCGGTTGTCGTC
AAGATGGAGAACCCTAACTGGTCCATTGCGGAGCTGGAGGGCCCGTCGGATGACGATTTT
CTTCTCGCCGGTTCGCCCAACACCAACAGGGACAAAGGCCGGGGCAAAAACGCCAGGCAG
CTCACATGGGTTCTTCTCCTCAAAGCCCACAAGGCCGCCGGTTGTCTGACCTCCATTGCG
TCGGCAATGTTCGGCCTCGCTGCCGCCGTGCGCCGCCGAGTCGCTTCCGGAAGGACCGAT
ACCGATAACGACAACGGCGGAGGCATGGAGCAGGAGAACCCAACGGTGAAAAGCCGGTTC
TATTCGTGTATAAAGGTGTTTCTGTGGTTATCTGTTGTGTTGCTGGTATTTGAGGTGGCA
GCCTACTTCAAGGGTTGGCATTTCGGCGCACCCCATCTTCAATTGCAGTATTTATTGACA
GCTCCATATGGGGTTAAGGATATCTTCAATTCCTTATATTCTCGATGGGTTTTGATTCGG
GTGGAGTACCTCGCTCCTCCTCTGCAATTCCTTGCCAATGCTTGTATAGTGCTTTTCCTT
ATACAGAGTGTGGATAGGCTAGTTCTTTGTTTGGGGTGTTTCTGGATCAAATTCAAGAAG
ATTAAACCGGTTCCTAAGGGGACTGTGGATCTTGAATCCGGTGATGGAAATGGTTACTTT
CCCAGGGTTCTTGTTCAGATCCCCATGTGCAATGAAAAAGAGGTTTATCAGCAATCTATT
GCAGCCTGCTGCAATTTGGACTGGCCAAAATCAAGCATACTAATCCAAGTTCTGGACGAT
TCAGATGACCCAGTGACACAGTTGATGATCAAAGAGGAGGTCACAAAATGGCAGCAAGAG
GGCGCCCACATTTTGTACAGGCACCGGGTGATCAGAGACGGGTACAAGGCTGGTAATCTC
AAGTCTGCTATGAATTGCAGTTATGTCAAGGACTATGAATTTGTGGCAATATTTGATGCA
GATTTTCAGCCCACCCCTGATTTTCTGAAAAGAACAGTTCCACATTTCAAGGACAATGAA
GAACTAGGGCTGGTTCAGGCAAGGTGGTCTTTTGTGAATAAGGATGAGAACCTTCTAACT
AGGTTACAGAACATTAACTTGTCTTTTCATTTCGAAGTGGAGCAGCAAGTTAATGGAGTT
TTCATCAATTTCTTTGGTTTCAACGGCACTGCTGGAGTGTGGAGGATAAAGGCATTAGAG
GATTCTGGTGGTTGGTTGGAGAGGACCACTGTTGAGGACATGGATATTGCTGTTCGAGCT
CATCTTCAGGGCTGGAAATTCATCTTCCTCAATGATGTGGAGTGCCAATGTGAACTGCCA
GAGTCTTATGAAGCTTATAGGAAACAACAACACAGATGGCATTCTGGACCCATGCAGTTG
TTTCGCCTATGTTTGCCTGATGTTATCCGATCCAAGATCAGTATTTGGAAGAAGGCAAAT
CTAATCTTCCTCTTCTTTCTCCTCAGAAAACTGATACTACCCTTCTATTCTTTCACCCTG
TTCTGCATAATTCTCCCAATGACAATGTTCATCCCTGAGGCTGAGCTCCCATCATGGGTT
GTATGTTACATTCCGGCAACTATGTCATTTCTCAACATCCTCCCTTCTCCAAAATCCTTC
CCCTTCATTGTCCCCTATCTTCTCTTTGAGAACACCATGTCAGTGACCAAGTTCAATGCA
ATGATCTCAGGCCTATTCCAGCTGGGAAGTGCATATGAATGGGTTGTCACAAAGAAATCT
GGACGCTCCTCTGAGGGTGATCTTGTCTCCCTAGTTGCAAAAGGCCCGAAGCATCAAAGG
GGAAGCTCAGAGCCTAATATTGGGGAGATGGAGGAAACTTTACTGCAGGAACAAAAGGCC
TCTAGGAAGAAAAAGCACAACAGGATTTATACAAAGGAGCTGGCATTGGCTTTCCTTCTT
CTAACAGCTTCAGCAAGGAGCCTCCTCTCTGCTCAGGGGATCCACTTCTACTTCCTGCTA
TTTCAGGGCATATCATTTCTTCTGGTTGGTTTAGACTTGATTGGAGAGCAGGTTGAGTAA

Peptide Sequence

PEP ID

VIT_18s0001g08580.t01
PEP Infomation

pep chromosome:12X:18:7027174:7030736:1 gene:VIT_18s0001g08580 transcript:VIT_18s0001g08580.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAPSFDWWTKESHRGTPVVVKMENPNWSIAELEGPSDDDFLLAGSPNTNRDKGRGKNARQ
LTWVLLLKAHKAAGCLTSIASAMFGLAAAVRRRVASGRTDTDNDNGGGMEQENPTVKSRF
YSCIKVFLWLSVVLLVFEVAAYFKGWHFGAPHLQLQYLLTAPYGVKDIFNSLYSRWVLIR
VEYLAPPLQFLANACIVLFLIQSVDRLVLCLGCFWIKFKKIKPVPKGTVDLESGDGNGYF
PRVLVQIPMCNEKEVYQQSIAACCNLDWPKSSILIQVLDDSDDPVTQLMIKEEVTKWQQE
GAHILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKDNE
ELGLVQARWSFVNKDENLLTRLQNINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALE
DSGGWLERTTVEDMDIAVRAHLQGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQL
FRLCLPDVIRSKISIWKKANLIFLFFLLRKLILPFYSFTLFCIILPMTMFIPEAELPSWV
VCYIPATMSFLNILPSPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKS
GRSSEGDLVSLVAKGPKHQRGSSEPNIGEMEETLLQEQKASRKKKHNRIYTKELALAFLL
LTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVE

Transcript Sequence

Transcript ID

VIT_18s0001g08580.t01
Transcript Infomation

cdna chromosome:12X:18:7027174:7030736:1 gene:VIT_18s0001g08580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAGTCGTGTTAGGGTCGAAACTCGAAAGCTGTAATTGAATGCGAGCTGTTTGGACACAT
CCCCAGAATCATAGCACCCAAATCTTTCTCTACACAGAGGGGCTTCTTTCTTCTTATAAG
ATAAAATCTTCCGAATGCCACCGCGTATTATAGACGCTTTGCTTTGATCCGAACCCACGC
GTCAATCTCCGCCTCTATTTTCTCTACTCTCTTGAGACTCCGTGGCTTTTCTGACAATGA
GATAAAAAACCAGAGTTCGAGGCTTTGATGTTCCACCCATTTGGCCTCTGAAACCACGGG
GCTTTGCTTTTGGTTCTTGGCTTCGGGGAGGAGTGATTCTGGGAGGTGGGTTTTTGAGAT
CAGGAGCAAAAATGGCGCCATCCTTTGACTGGTGGACAAAGGAGAGTCACAGGGGGACGC
CGGTTGTCGTCAAGATGGAGAACCCTAACTGGTCCATTGCGGAGCTGGAGGGCCCGTCGG
ATGACGATTTTCTTCTCGCCGGTTCGCCCAACACCAACAGGGACAAAGGCCGGGGCAAAA
ACGCCAGGCAGCTCACATGGGTTCTTCTCCTCAAAGCCCACAAGGCCGCCGGTTGTCTGA
CCTCCATTGCGTCGGCAATGTTCGGCCTCGCTGCCGCCGTGCGCCGCCGAGTCGCTTCCG
GAAGGACCGATACCGATAACGACAACGGCGGAGGCATGGAGCAGGAGAACCCAACGGTGA
AAAGCCGGTTCTATTCGTGTATAAAGGTGTTTCTGTGGTTATCTGTTGTGTTGCTGGTAT
TTGAGGTGGCAGCCTACTTCAAGGGTTGGCATTTCGGCGCACCCCATCTTCAATTGCAGT
ATTTATTGACAGCTCCATATGGGGTTAAGGATATCTTCAATTCCTTATATTCTCGATGGG
TTTTGATTCGGGTGGAGTACCTCGCTCCTCCTCTGCAATTCCTTGCCAATGCTTGTATAG
TGCTTTTCCTTATACAGAGTGTGGATAGGCTAGTTCTTTGTTTGGGGTGTTTCTGGATCA
AATTCAAGAAGATTAAACCGGTTCCTAAGGGGACTGTGGATCTTGAATCCGGTGATGGAA
ATGGTTACTTTCCCAGGGTTCTTGTTCAGATCCCCATGTGCAATGAAAAAGAGGTTTATC
AGCAATCTATTGCAGCCTGCTGCAATTTGGACTGGCCAAAATCAAGCATACTAATCCAAG
TTCTGGACGATTCAGATGACCCAGTGACACAGTTGATGATCAAAGAGGAGGTCACAAAAT
GGCAGCAAGAGGGCGCCCACATTTTGTACAGGCACCGGGTGATCAGAGACGGGTACAAGG
CTGGTAATCTCAAGTCTGCTATGAATTGCAGTTATGTCAAGGACTATGAATTTGTGGCAA
TATTTGATGCAGATTTTCAGCCCACCCCTGATTTTCTGAAAAGAACAGTTCCACATTTCA
AGGACAATGAAGAACTAGGGCTGGTTCAGGCAAGGTGGTCTTTTGTGAATAAGGATGAGA
ACCTTCTAACTAGGTTACAGAACATTAACTTGTCTTTTCATTTCGAAGTGGAGCAGCAAG
TTAATGGAGTTTTCATCAATTTCTTTGGTTTCAACGGCACTGCTGGAGTGTGGAGGATAA
AGGCATTAGAGGATTCTGGTGGTTGGTTGGAGAGGACCACTGTTGAGGACATGGATATTG
CTGTTCGAGCTCATCTTCAGGGCTGGAAATTCATCTTCCTCAATGATGTGGAGTGCCAAT
GTGAACTGCCAGAGTCTTATGAAGCTTATAGGAAACAACAACACAGATGGCATTCTGGAC
CCATGCAGTTGTTTCGCCTATGTTTGCCTGATGTTATCCGATCCAAGATCAGTATTTGGA
AGAAGGCAAATCTAATCTTCCTCTTCTTTCTCCTCAGAAAACTGATACTACCCTTCTATT
CTTTCACCCTGTTCTGCATAATTCTCCCAATGACAATGTTCATCCCTGAGGCTGAGCTCC
CATCATGGGTTGTATGTTACATTCCGGCAACTATGTCATTTCTCAACATCCTCCCTTCTC
CAAAATCCTTCCCCTTCATTGTCCCCTATCTTCTCTTTGAGAACACCATGTCAGTGACCA
AGTTCAATGCAATGATCTCAGGCCTATTCCAGCTGGGAAGTGCATATGAATGGGTTGTCA
CAAAGAAATCTGGACGCTCCTCTGAGGGTGATCTTGTCTCCCTAGTTGCAAAAGGCCCGA
AGCATCAAAGGGGAAGCTCAGAGCCTAATATTGGGGAGATGGAGGAAACTTTACTGCAGG
AACAAAAGGCCTCTAGGAAGAAAAAGCACAACAGGATTTATACAAAGGAGCTGGCATTGG
CTTTCCTTCTTCTAACAGCTTCAGCAAGGAGCCTCCTCTCTGCTCAGGGGATCCACTTCT
ACTTCCTGCTATTTCAGGGCATATCATTTCTTCTGGTTGGTTTAGACTTGATTGGAGAGC
AGGTTGAGTAAACAAGGAAATGGTAGGCTTGGTAGGGGATAAATGGACTATATAAACACA
GGAAACAAGGGCGGATAATATTTAGAGTACCATTGAATGAGAAATGAGAACAGCTGTGGG
GAGTCGTTAGAGGGCTGAGGGTTAATATTATTGCCCTCTAACCTCCCAGATCAAATTCCG
CCAAATAGGAGAAGTGCCACAAAGACACAAGGAATGGCTTCGCTTTGGAGATAAAGAGAG
ACATAAAATGGTGGTGCTCCTGAAAATATGTGAGGTTTTTTTTTTTCTATTTTGTATTTT
CTTTTTTTGATTCTTTTGTTTTTGGGTCTATTCTTTTGTAAGAAAATGTTTATTTCAAAC
ATCAAACACCAATCTTAGTTACAGCAG