Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g08430.t01
CDS Infomation

cds chromosome:12X:18:6893297:6896731:1 gene:VIT_18s0001g08430 gene_biotype:protein_coding transcript_biotype:protein_coding description:Branched-chain-amino-acid aminotransferase [Source:UniProtKB/TrEMBL;Acc:E0CNW7]
Sequence

ATGATCAGTAGGAGGGCCTGCTTTCGCAATTTGATCCAATCTCTAAGAACGGGTTCCACT
GCATCTAAGCTTAGATCTTCCAATTGCTATACGTCAAGGACTGCACCTTCCTTGCAACCA
GTGGTCGAGCTCTCTCCTGATAGTGATGATGAGTACGCTGATGTGGACTGGGACAACCTG
GGATTTTCTCTAAGACCCACCGATTACATGTACATAACAAAATGCTCCGGGGGTGATAGT
TTTGAAGAAGGCCATCTTAGTCGCTATGGAAATATAGAGTTGAGCCCTTCTGCTGGTGTG
TTAAATTATGGACAGGGGCTGTTTGAAGGCACCAAAGCATATAGGAGAGAAAATGGGCGC
CTCTGCCTCTTCCGCCCTGATCAGAATGCCATCCGTATGCAGGCTGGTGCAGAAAGAATG
TGCATGCCTTCCCCATCCATCCATCAATTTGTAGAAGCTGTCAAGCAAACTGCATTCGCT
AACAAGCGCTGGATTCCTCCTCCAGGAAAAGGGTCACTGTATATTAGGCCTTTGCTCATG
GGGAGTGGACCCGTATTGGGTTTAGGCCCAGCACCTGAATGCACATTCCTCATATATGCT
TCCCCTGTTGGCAACTATTTCAAGGAGGGTTTGGCACCCTTAAACCTATTTATTGACGAT
GAGTATCATCGTGCAACACGTGGAGGGGCTGGAGGGGTGAAAACCATTACCAATTATTCT
CCTGTTTTGAAAGCACTAACTAGAGCAAAGAGCAGAGGGTTCTCTGATGTGCTATACCTT
GATTCAGTGTATAAGAAAAACATCGAGGAGGTCTCTTCTTGTAACGTCTTCATTGTGAAG
GATAATGTTATTTCAACTCCGGCCACAGGAGGAACCATTCTTGAAGGAGTGACTCGAAAA
AGCATCGTCGACATTGCACTTGATCACGGTTACCAGGTTAAGGAGCAATGTATTCCAGTG
GAGGAAGTGATGGAAGCCGATGAAGTTTTCTGCACCGGAACCGCTGTTGGTGTAGCTGCG
GTGGGAAGCATTACATATCAGGGTAAAAGGGTGGAATACAAAATGGGTGATCAGTGTGTG
AGTCAGGAACTGTTCTCAACGTATATGGGGATTCAAAAAGGTGATATCGAGGACAAGAAA
GGCTGGATTCTGGAGATTGATTAA

Peptide Sequence

PEP ID

VIT_18s0001g08430.t01
PEP Infomation

pep chromosome:12X:18:6893297:6896731:1 gene:VIT_18s0001g08430 transcript:VIT_18s0001g08430.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Branched-chain-amino-acid aminotransferase [Source:UniProtKB/TrEMBL;Acc:E0CNW7]
Sequence

MISRRACFRNLIQSLRTGSTASKLRSSNCYTSRTAPSLQPVVELSPDSDDEYADVDWDNL
GFSLRPTDYMYITKCSGGDSFEEGHLSRYGNIELSPSAGVLNYGQGLFEGTKAYRRENGR
LCLFRPDQNAIRMQAGAERMCMPSPSIHQFVEAVKQTAFANKRWIPPPGKGSLYIRPLLM
GSGPVLGLGPAPECTFLIYASPVGNYFKEGLAPLNLFIDDEYHRATRGGAGGVKTITNYS
PVLKALTRAKSRGFSDVLYLDSVYKKNIEEVSSCNVFIVKDNVISTPATGGTILEGVTRK
SIVDIALDHGYQVKEQCIPVEEVMEADEVFCTGTAVGVAAVGSITYQGKRVEYKMGDQCV
SQELFSTYMGIQKGDIEDKKGWILEID

Transcript Sequence

Transcript ID

VIT_18s0001g08430.t01
Transcript Infomation

cdna chromosome:12X:18:6893297:6896731:1 gene:VIT_18s0001g08430 gene_biotype:protein_coding transcript_biotype:protein_coding description:Branched-chain-amino-acid aminotransferase [Source:UniProtKB/TrEMBL;Acc:E0CNW7]
Sequence

ATTACATACATACTCTGAGATATTGCTTCCTCTCATCGGTACCTCACTCCTTGTAACCGA
AATTAATTTGGAGTCTTGGGGAGAATCACTGAATCTGAATTTTCAGAATACCCAGTAGGA
GCAACCATGATCAGTAGGAGGGCCTGCTTTCGCAATTTGATCCAATCTCTAAGAACGGGT
TCCACTGCATCTAAGCTTAGATCTTCCAATTGCTATACGTCAAGGACTGCACCTTCCTTG
CAACCAGTGGTCGAGCTCTCTCCTGATAGTGATGATGAGTACGCTGATGTGGACTGGGAC
AACCTGGGATTTTCTCTAAGACCCACCGATTACATGTACATAACAAAATGCTCCGGGGGT
GATAGTTTTGAAGAAGGCCATCTTAGTCGCTATGGAAATATAGAGTTGAGCCCTTCTGCT
GGTGTGTTAAATTATGGACAGGGGCTGTTTGAAGGCACCAAAGCATATAGGAGAGAAAAT
GGGCGCCTCTGCCTCTTCCGCCCTGATCAGAATGCCATCCGTATGCAGGCTGGTGCAGAA
AGAATGTGCATGCCTTCCCCATCCATCCATCAATTTGTAGAAGCTGTCAAGCAAACTGCA
TTCGCTAACAAGCGCTGGATTCCTCCTCCAGGAAAAGGGTCACTGTATATTAGGCCTTTG
CTCATGGGGAGTGGACCCGTATTGGGTTTAGGCCCAGCACCTGAATGCACATTCCTCATA
TATGCTTCCCCTGTTGGCAACTATTTCAAGGAGGGTTTGGCACCCTTAAACCTATTTATT
GACGATGAGTATCATCGTGCAACACGTGGAGGGGCTGGAGGGGTGAAAACCATTACCAAT
TATTCTCCTGTTTTGAAAGCACTAACTAGAGCAAAGAGCAGAGGGTTCTCTGATGTGCTA
TACCTTGATTCAGTGTATAAGAAAAACATCGAGGAGGTCTCTTCTTGTAACGTCTTCATT
GTGAAGGATAATGTTATTTCAACTCCGGCCACAGGAGGAACCATTCTTGAAGGAGTGACT
CGAAAAAGCATCGTCGACATTGCACTTGATCACGGTTACCAGGTTAAGGAGCAATGTATT
CCAGTGGAGGAAGTGATGGAAGCCGATGAAGTTTTCTGCACCGGAACCGCTGTTGGTGTA
GCTGCGGTGGGAAGCATTACATATCAGGGTAAAAGGGTGGAATACAAAATGGGTGATCAG
TGTGTGAGTCAGGAACTGTTCTCAACGTATATGGGGATTCAAAAAGGTGATATCGAGGAC
AAGAAAGGCTGGATTCTGGAGATTGATTAAGCTTTATAGCCACCTCATCTACAGCACTTG
TACATGGTACTGCTAAGAGCATGGTATTCCTAATAAAATTAATGTTCACGTCAAA