Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g08320.t01
CDS Infomation

cds chromosome:12X:18:6826580:6829229:1 gene:VIT_18s0001g08320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATCCCTGTCCTTTCGTGCGCCTTCTCGTCGGGAATCTTGCTCTCAAGGTTCCGGTT
GCCTCCAAACCTGCTCGCTCCGTCGTGCATCCTTCTTCCTCCCCTTGCTTCTGCAAAATA
AAACTAAAGAACTTTCCTCTTCAAACCGCTGTCGTCCCCTTCATTCCTCCGGAGAATCAG
TTCCCGGACGGTCAGGTCCAAACTCTAGCTGCCAGCTTTCATTTGAGCAAGGCCGATCTG
GAGAAACTCGCCGCCAAATCCATCTTCGCGGGGAAACTTTGCCTGAAGATTGCGGTATAC
ACTGGGCGGAGAGGGACTACTTGCGGTGTAAATTCTGGGAGACTATTGGGGAGAGTTACA
GTTCCGTTGGATCTGGCGGGAACAGAAACTAGGCCTTGTGTGTTTCACAATGGGTGGATT
TCGGTTGGAAAGGGCACCAAGGGTTCGTCTGCGCAGTTCCATTTGAATGTAAAATCCGAG
CCCGATCCCAGATTCGTATTTCAGTTCGATGGAGAACCCGAATGCAACCCACAAGTCTTT
CAGATTCAAGGGAGCATTCGACAACCCGTGTTTACTTGCAAGTTCAGTTTCAGGAACACC
GGAGGCCCAAATCAGAGATCCAGATCATTACAGTCCGAAACCATTAGTTCAAGGACCTGG
TTGAGTTCATTCGGCAGCGAGAGGGAAAGGCCCGGAAGGGAGCGTAAGGGATGGTCCATC
ACGGTTCACGACCTCTCTGGCTCTCCAGTAGCCGCTGCTTCAATGGTTACACCCTTTGTA
GCCTCACCTGGTTCTGACCGAGTCAGCCGATCGAACCCTGGTTCTTGGCTCATTCTGCGT
CCCGGGGATGGAACATGGAAGCCCTGGGGACGCCTTGAGGCCTGGCGCGAGCGAGGTTCC
AGTGACGGGCTGGGTTACAGGTTCGAATTAATTCCAGATACTAATGGAGGAATGGGTGCG
GCAGGCATAGTTTTATCGGAGTCTACTCTTGGTAGCAACAAGGGCGGGAAATTCGTAATA
GACTTGGGCGGTGGGAGCAACGGACGTGCGACTCCTGGTAGCGCAACGTCGCCGGCTTGC
AGCCCTAGAAGCAGCGGAGATTTCGGGTACGGGTTGTGGCCATACTGCAGCTACAGAGGG
TTTGTGATGTCTGCGACGGTTGAAGGTGAGGGAAAATGCAGTAAGCCATCAGTGGAGATC
AGTGTGCAGCACGTGAACTGCACAGAAGATGCAGCTGCATTCGTGGCGCTGGCCGCAGCC
GTTGATCTTAGCATGGATGCTTGCAGGCTTTTCTCTCACAAGCTCAGAAAGGAGTTGTGC
CAGCACCAGGATTTGCTAGGCTGA

Peptide Sequence

PEP ID

VIT_18s0001g08320.t01
PEP Infomation

pep chromosome:12X:18:6826580:6829229:1 gene:VIT_18s0001g08320 transcript:VIT_18s0001g08320.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDPCPFVRLLVGNLALKVPVASKPARSVVHPSSSPCFCKIKLKNFPLQTAVVPFIPPENQ
FPDGQVQTLAASFHLSKADLEKLAAKSIFAGKLCLKIAVYTGRRGTTCGVNSGRLLGRVT
VPLDLAGTETRPCVFHNGWISVGKGTKGSSAQFHLNVKSEPDPRFVFQFDGEPECNPQVF
QIQGSIRQPVFTCKFSFRNTGGPNQRSRSLQSETISSRTWLSSFGSERERPGRERKGWSI
TVHDLSGSPVAAASMVTPFVASPGSDRVSRSNPGSWLILRPGDGTWKPWGRLEAWRERGS
SDGLGYRFELIPDTNGGMGAAGIVLSESTLGSNKGGKFVIDLGGGSNGRATPGSATSPAC
SPRSSGDFGYGLWPYCSYRGFVMSATVEGEGKCSKPSVEISVQHVNCTEDAAAFVALAAA
VDLSMDACRLFSHKLRKELCQHQDLLG

Transcript Sequence

Transcript ID

VIT_18s0001g08320.t01
Transcript Infomation

cdna chromosome:12X:18:6826580:6829229:1 gene:VIT_18s0001g08320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAAAAGAGACATCCTTCCATCCATCCATCCGCTCTACATAAAACGACTTTGGAATTTACG
AGCAGAGGAAGGGAGTGGGAGACAGGAGAGCCTAGAGAGCAGATGGAGATAGAGGTGGAT
GGTGGCAGTGCGCAATGCGCACCAGTTCATCCATTATCGGCGCTCGCATCCCTATGGAAC
CTTGCCCACCTATGCCAGCCTGTTGCAGCCTAGGATATTTAGGTGTACTATACGCATCCC
AGGCGCATTTTGTTTGTGCTACGCCACATGTTCTTGACACTTCCTTAAACCTTATACCCC
TCCTTTCTCTCTCCTGGTGTATCTCACATACAATCGACTGCTGTTGACCGGTCGCCGGAG
GGAGTGGGAGTGCTCCAATGGATCCCTGTCCTTTCGTGCGCCTTCTCGTCGGGAATCTTG
CTCTCAAGGTTCCGGTTGCCTCCAAACCTGCTCGCTCCGTCGTGCATCCTTCTTCCTCCC
CTTGCTTCTGCAAAATAAAACTAAAGAACTTTCCTCTTCAAACCGCTGTCGTCCCCTTCA
TTCCTCCGGAGAATCAGTTCCCGGACGGTCAGGTCCAAACTCTAGCTGCCAGCTTTCATT
TGAGCAAGGCCGATCTGGAGAAACTCGCCGCCAAATCCATCTTCGCGGGGAAACTTTGCC
TGAAGATTGCGGTATACACTGGGCGGAGAGGGACTACTTGCGGTGTAAATTCTGGGAGAC
TATTGGGGAGAGTTACAGTTCCGTTGGATCTGGCGGGAACAGAAACTAGGCCTTGTGTGT
TTCACAATGGGTGGATTTCGGTTGGAAAGGGCACCAAGGGTTCGTCTGCGCAGTTCCATT
TGAATGTAAAATCCGAGCCCGATCCCAGATTCGTATTTCAGTTCGATGGAGAACCCGAAT
GCAACCCACAAGTCTTTCAGATTCAAGGGAGCATTCGACAACCCGTGTTTACTTGCAAGT
TCAGTTTCAGGAACACCGGAGGCCCAAATCAGAGATCCAGATCATTACAGTCCGAAACCA
TTAGTTCAAGGACCTGGTTGAGTTCATTCGGCAGCGAGAGGGAAAGGCCCGGAAGGGAGC
GTAAGGGATGGTCCATCACGGTTCACGACCTCTCTGGCTCTCCAGTAGCCGCTGCTTCAA
TGGTTACACCCTTTGTAGCCTCACCTGGTTCTGACCGAGTCAGCCGATCGAACCCTGGTT
CTTGGCTCATTCTGCGTCCCGGGGATGGAACATGGAAGCCCTGGGGACGCCTTGAGGCCT
GGCGCGAGCGAGGTTCCAGTGACGGGCTGGGTTACAGGTTCGAATTAATTCCAGATACTA
ATGGAGGAATGGGTGCGGCAGGCATAGTTTTATCGGAGTCTACTCTTGGTAGCAACAAGG
GCGGGAAATTCGTAATAGACTTGGGCGGTGGGAGCAACGGACGTGCGACTCCTGGTAGCG
CAACGTCGCCGGCTTGCAGCCCTAGAAGCAGCGGAGATTTCGGGTACGGGTTGTGGCCAT
ACTGCAGCTACAGAGGGTTTGTGATGTCTGCGACGGTTGAAGGTGAGGGAAAATGCAGTA
AGCCATCAGTGGAGATCAGTGTGCAGCACGTGAACTGCACAGAAGATGCAGCTGCATTCG
TGGCGCTGGCCGCAGCCGTTGATCTTAGCATGGATGCTTGCAGGCTTTTCTCTCACAAGC
TCAGAAAGGAGTTGTGCCAGCACCAGGATTTGCTAGGCTGATTCAGAGTTGTTTGTTCTG
ATGGCTTTTTTTTTTCTTCCAACCGTTTTTTAAGTGGATTTTTTTTTATTTCCATCCTCG
TGAGAGTTATTACTACTAACAAATCACTAGAGACTGTACAGCCGGTGGGGGGAGAGATTG
ACAGGGCACGCTTTGTTTTTATTTGTGTGGCTTGTGTTCATTTTTATTTTTATTTTTGGG
TTCTAATATTGTAGTCGCTGACTCAATATTTTAAATTTTAGATGTAAGAAGAGGATTGTT
ATTATGGTTTGTCAA