Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g08180.t01
CDS Infomation

cds chromosome:12X:18:6652328:6660443:1 gene:VIT_18s0001g08180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGAATTGCAGTGGAAGGGTGCATGCACGGTGACCTAGATAATGTGTACTCAACTCTC
CGGTATCTGGAGGAGGTTGAGAACACCAAAATCGATCTTCTCATTTGCTGCGGTGACTTT
CAGGCTGTTAGGAACAAAAAGGATTTGGAGAGTCTAAATGTGCCACCAAAATACAGGAGC
ATGAACTCTTTCTGGAAGTATTACTCAGGACAAGAAGTTGCCCCATTTCCAACTATATTC
ATTGGTGGGAATCATGAAGCATCCAATTACCTGTGGGAATTGTACTATGGAGGATGGGCA
GCGCCTAACATATACTTCTTGGGGTTTGCTGGAGTAGTCAAGTTTGGAAATATTCGTATT
GGTGGGCTCTCTGGAATTTATAATGAACGTCATTATCATTTAGGACACTATGAGCGACCA
CCTTATAATGAAAGGGATATCCGGTCTGTATATCATGTTCGTGAATATGATGTCCATAAG
CTTATGCAAGTTGAAGAACCGATTGATATCTTTCTTTCACATGATTGGCCTTGTGGCATC
ACTGACCATGGGAACTGGAAGGAACTTGTTCGATACAAACCTTTTTTTGAGAAAGAGATC
CAGGAAAGAACTTTGGGAAGCAAGGCTGCTGCAGAACTGCTGGAAAAACTGAAACCTTCC
TACTGGTTTTCAGCTCACCTACACTGCAAATTTGCTGCTCTTGTTCAACATGGGGAGGTT
GGTCAAGTGACTAAATTTCTTGCACTTGACAAGTGCCTTCCAGGTCGCAAATTTTTGCAG
ATTGTTGAAATAGAAACAGTGCCAGGACCTTATGAGATTCAGTATGATGAAGAATGGTTG
GCAATAACACGGAAGTTCAACTCTATCTTTCCTTTAACCATCCATCGTGCAAATTTGGGG
GGTGCACAGGTTGACATGCAAGATTGTCGTGATTGGGTAAGGAGTAGGCTACTAACAAGG
GGGGCCAAACCTTTCGAATTTGTTCAAACGGTTCCTTGCTATGATCCCTCTCAGTCTGCC
TCCAATAGTTGCTTTTCTGGGTATCATCGCAACCCTCAAACGGAGCTTTTGTTGCAATTT
TTAGAACTGCCCTATCTTCTGGATAACACATTAGAATCAAGAGATCCAACCCACAGTCCA
ATGTCATTGATTTCTAGAGGTATATTTTCTCATTCTTTATCAGTGGTAGTTGAAGTAGGC
CAACTGCTTTCATTTTGTCTTTAA

Peptide Sequence

PEP ID

VIT_18s0001g08180.t01
PEP Infomation

pep chromosome:12X:18:6652328:6660443:1 gene:VIT_18s0001g08180 transcript:VIT_18s0001g08180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRIAVEGCMHGDLDNVYSTLRYLEEVENTKIDLLICCGDFQAVRNKKDLESLNVPPKYRS
MNSFWKYYSGQEVAPFPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRI
GGLSGIYNERHYHLGHYERPPYNERDIRSVYHVREYDVHKLMQVEEPIDIFLSHDWPCGI
TDHGNWKELVRYKPFFEKEIQERTLGSKAAAELLEKLKPSYWFSAHLHCKFAALVQHGEV
GQVTKFLALDKCLPGRKFLQIVEIETVPGPYEIQYDEEWLAITRKFNSIFPLTIHRANLG
GAQVDMQDCRDWVRSRLLTRGAKPFEFVQTVPCYDPSQSASNSCFSGYHRNPQTELLLQF
LELPYLLDNTLESRDPTHSPMSLISRGIFSHSLSVVVEVGQLLSFCL

Transcript Sequence

Transcript ID

VIT_18s0001g08180.t01
Transcript Infomation

cdna chromosome:12X:18:6652328:6660443:1 gene:VIT_18s0001g08180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGTGGGCCCTCGGTGATCGGAACCCATAATCGAGTCCAGTTTTTCTCCTTTCTGCAATCG
AAGTTGCTTTGAACCCTCTCAAACCGATCTCCGCCAACATGAGAATTGCAGTGGAAGGGT
GCATGCACGGTGACCTAGATAATGTGTACTCAACTCTCCGGTATCTGGAGGAGGTTGAGA
ACACCAAAATCGATCTTCTCATTTGCTGCGGTGACTTTCAGGCTGTTAGGAACAAAAAGG
ATTTGGAGAGTCTAAATGTGCCACCAAAATACAGGAGCATGAACTCTTTCTGGAAGTATT
ACTCAGGACAAGAAGTTGCCCCATTTCCAACTATATTCATTGGTGGGAATCATGAAGCAT
CCAATTACCTGTGGGAATTGTACTATGGAGGATGGGCAGCGCCTAACATATACTTCTTGG
GGTTTGCTGGAGTAGTCAAGTTTGGAAATATTCGTATTGGTGGGCTCTCTGGAATTTATA
ATGAACGTCATTATCATTTAGGACACTATGAGCGACCACCTTATAATGAAAGGGATATCC
GGTCTGTATATCATGTTCGTGAATATGATGTCCATAAGCTTATGCAAGTTGAAGAACCGA
TTGATATCTTTCTTTCACATGATTGGCCTTGTGGCATCACTGACCATGGGAACTGGAAGG
AACTTGTTCGATACAAACCTTTTTTTGAGAAAGAGATCCAGGAAAGAACTTTGGGAAGCA
AGGCTGCTGCAGAACTGCTGGAAAAACTGAAACCTTCCTACTGGTTTTCAGCTCACCTAC
ACTGCAAATTTGCTGCTCTTGTTCAACATGGGGAGGTTGGTCAAGTGACTAAATTTCTTG
CACTTGACAAGTGCCTTCCAGGTCGCAAATTTTTGCAGATTGTTGAAATAGAAACAGTGC
CAGGACCTTATGAGATTCAGTATGATGAAGAATGGTTGGCAATAACACGGAAGTTCAACT
CTATCTTTCCTTTAACCATCCATCGTGCAAATTTGGGGGGTGCACAGGTTGACATGCAAG
ATTGTCGTGATTGGGTAAGGAGTAGGCTACTAACAAGGGGGGCCAAACCTTTCGAATTTG
TTCAAACGGTTCCTTGCTATGATCCCTCTCAGTCTGCCTCCAATAGTTGCTTTTCTGGGT
ATCATCGCAACCCTCAAACGGAGCTTTTGTTGCAATTTTTAGAACTGCCCTATCTTCTGG
ATAACACATTAGAATCAAGAGATCCAACCCACAGTCCAATGTCATTGATTTCTAGAGGTA
TATTTTCTCATTCTTTATCAGTGGTAGTTGAAGTAGGCCAACTGCTTTCATTTTGTCTTT
AA