Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g07970.t01
CDS Infomation

cds chromosome:12X:18:6438836:6441781:-1 gene:VIT_18s0001g07970 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGTCTCTGCCTTCTGTTGCTGTTACCCGCACTCCCAAGAGCGAATCTGAATTCCGA
AAATATTCCGCCAGTTTTCTTCCCAGCGAAAAGAGCCCGAGTGTCTCTTATCAGCGAAGC
ACCCAATTAGATGGAGTTTCAGAGGCAAGGTGTCTGGACTTCCGAGAAGCGCTCTCTTTT
ATAAGAGAAGGCACGAAGGTGGAGTCAGCTTTTTACGTACCCATCTTGCAAGAATGCATC
GACAAGAAATTGGTTTCAGACGCGCAAAAGATTCATGCCCACATCGTAAAAACCGGAGCC
CACAAGGATGCATTTCTGATGACCTTCCTCGTCAATGTTTATGCCAAATGTGGGACAATG
GAGACTGCTCGAAAGGTTTTTGACGAATTGCCTCGCAGAAACGTGGTTTCATGGACGACC
CTGATGACGGGTTACGTTCACGATTCAAAGCCGGAGTTGGCTGTCCAAGTCTTTCGAGAA
ATGCTGGAAGCAGGAGCTTATCCCACCAACTACACTTTGGGAACTGCTTTGAGTGCTTCT
TCTGATTTGCACTCTAAAGAATTAGGGAAGCAAATCCATGGTTATAGTATTAAATACAGG
ATTGAATTCGACGCTAGCATTGGCAACTCCCTTTGTAGCTTGTACTCAAAATGCGGCAGC
TTGGAATGTGCCGTTAAAGCTTTCAGGAGGATAAGGGATAAGAATGTGATTTCATGGACT
ACAGTTATATCTGCTTGGGGCGATAATGGTGAAGCTGCAACTGGTCTGCAATTTTTCGTT
GAGATGCTTTCCGAGTGTGTTGAGCCCAATGAGTTCACACTGACCAGTGCCTTGAGCTTG
TGTTGTGTAATGCAGAGTTTGGACATTGGGACGCAGATCCATTCACTGACCATTAAACTT
GGGTTTGAATCAAATCTACCCATAAAGAATTCTATCATGTATTTGTACCTCAAATGTGGG
TGGATCCATGAAGCCAAGAAATTGTTTGATGAGATGGAAACTATCAGCTTGGTCACCTGG
AATGCGATGATTGCAGGGCATGCCAGGATGATGGATTTTGCAAAGGATGACCTTGCAGCA
CACCAGTGCGGAACTGAGGCACTTAGCATTTTCCTGAAATTGAATCGGTCTGGTATGAAA
CCTGATCTGTTCACCTTCTCAAGTGTCTTATCTGTGTGCAGCAGTTTGGTGGCCTTAGAA
CAAGGAGAACAAGTTCATGCTCAAACCATCAAAACCGGGTTTTTGTCAGATGTGGTTGTG
GGAACTGCTCTAGTGAACATGTATAACAAATGCGGAAGCATTGAGAGGGCAAGTAAAGCT
TTTGTGGAGATGTCTATCAGGACCTTGATATCATGGACTTCTATGATTACAGGTTATGCC
CAGAATGGCCAGCCTCAGCAAGCATTGCTGCTGTTTGAGGATATGAGATTAGCAGGAGTT
AGACCAAACAAGATTACCTTTGTAGGTGTTCTTTCAGCTTGTAGTCATGCTGGAATGGTT
GATGAAGCATTGGATTACTTTCAGATGATGAAAAATGAGTACAAAATCACTCCTGTGATG
GACCATTATGCATGCCTAATCGATATGTTTGTTAGGTTGGGTCGGTTAGACGAAGCTTTT
GATTTCATAAAAGAGATGGATTTGGAGCCCAATGAGTTTATATGGTCGATCTTGATTGCA
GGCTGTAGAAGTCAAGGGAAATTGGAGTTAGGGTTTTATGCGGCAGAACAGTTACTCAAC
CTGAAGCCAAAAGATACAGAGACCTACAACCTTTTGTTGAACATGTACCTTTCAGCAGGG
AAATGGAAGGAAGTTTCAAGGGTGAGAAAAATGATGAAAGAAGAGAAACTTGGAAGATTA
AAGGATTGGAGCTGGATTAGCATCAAGGACAAGATTTATTCATTCAAACGCAATGCCCGG
TCACATGCACAGAGTGGGGAGATGTATGAATTGTTGGGGAACTTGCATGAGAAAGCAAAG
AGTTTTGGATATGAATGGGAAGAAAGCTTAGAGGTGACCGATGAGGAGGAAGATGCTGAT
GAGGAGAAGGCATTAACTTCCATTGTTTATCACAGTGAAAAATTGGCTATTGCATTTGGG
CTGTTGAACACATCAAATGCTGTACCAATACGGGTTACGAAGAGTATTAGCATGTGCAGG
GATTGCCACAATTTTATTAGGATCATCTCGTTGCTGTCTGCTCGGGAAATCATCATTCGG
GATAGCAAGCGGCTTCACAAATTCATCAACGGACACTGTTCATGTGGAGATTTTGGAACT
CTAATCTGA

Peptide Sequence

PEP ID

VIT_18s0001g07970.t01
PEP Infomation

pep chromosome:12X:18:6438836:6441781:-1 gene:VIT_18s0001g07970 transcript:VIT_18s0001g07970.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASLPSVAVTRTPKSESEFRKYSASFLPSEKSPSVSYQRSTQLDGVSEARCLDFREALSF
IREGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTM
ETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSAS
SDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWT
TVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKL
GFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAA
HQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVV
GTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGV
RPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAF
DFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLLNMYLSAG
KWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQSGEMYELLGNLHEKAK
SFGYEWEESLEVTDEEEDADEEKALTSIVYHSEKLAIAFGLLNTSNAVPIRVTKSISMCR
DCHNFIRIISLLSAREIIIRDSKRLHKFINGHCSCGDFGTLI

Transcript Sequence

Transcript ID

VIT_18s0001g07970.t01
Transcript Infomation

cdna chromosome:12X:18:6438836:6441781:-1 gene:VIT_18s0001g07970 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGTCTCTGCCTTCTGTTGCTGTTACCCGCACTCCCAAGAGCGAATCTGAATTCCGA
AAATATTCCGCCAGTTTTCTTCCCAGCGAAAAGAGCCCGAGTGTCTCTTATCAGCGAAGC
ACCCAATTAGATGGAGTTTCAGAGGCAAGGTGTCTGGACTTCCGAGAAGCGCTCTCTTTT
ATAAGAGAAGGCACGAAGGTGGAGTCAGCTTTTTACGTACCCATCTTGCAAGAATGCATC
GACAAGAAATTGGTTTCAGACGCGCAAAAGATTCATGCCCACATCGTAAAAACCGGAGCC
CACAAGGATGCATTTCTGATGACCTTCCTCGTCAATGTTTATGCCAAATGTGGGACAATG
GAGACTGCTCGAAAGGTTTTTGACGAATTGCCTCGCAGAAACGTGGTTTCATGGACGACC
CTGATGACGGGTTACGTTCACGATTCAAAGCCGGAGTTGGCTGTCCAAGTCTTTCGAGAA
ATGCTGGAAGCAGGAGCTTATCCCACCAACTACACTTTGGGAACTGCTTTGAGTGCTTCT
TCTGATTTGCACTCTAAAGAATTAGGGAAGCAAATCCATGGTTATAGTATTAAATACAGG
ATTGAATTCGACGCTAGCATTGGCAACTCCCTTTGTAGCTTGTACTCAAAATGCGGCAGC
TTGGAATGTGCCGTTAAAGCTTTCAGGAGGATAAGGGATAAGAATGTGATTTCATGGACT
ACAGTTATATCTGCTTGGGGCGATAATGGTGAAGCTGCAACTGGTCTGCAATTTTTCGTT
GAGATGCTTTCCGAGTGTGTTGAGCCCAATGAGTTCACACTGACCAGTGCCTTGAGCTTG
TGTTGTGTAATGCAGAGTTTGGACATTGGGACGCAGATCCATTCACTGACCATTAAACTT
GGGTTTGAATCAAATCTACCCATAAAGAATTCTATCATGTATTTGTACCTCAAATGTGGG
TGGATCCATGAAGCCAAGAAATTGTTTGATGAGATGGAAACTATCAGCTTGGTCACCTGG
AATGCGATGATTGCAGGGCATGCCAGGATGATGGATTTTGCAAAGGATGACCTTGCAGCA
CACCAGTGCGGAACTGAGGCACTTAGCATTTTCCTGAAATTGAATCGGTCTGGTATGAAA
CCTGATCTGTTCACCTTCTCAAGTGTCTTATCTGTGTGCAGCAGTTTGGTGGCCTTAGAA
CAAGGAGAACAAGTTCATGCTCAAACCATCAAAACCGGGTTTTTGTCAGATGTGGTTGTG
GGAACTGCTCTAGTGAACATGTATAACAAATGCGGAAGCATTGAGAGGGCAAGTAAAGCT
TTTGTGGAGATGTCTATCAGGACCTTGATATCATGGACTTCTATGATTACAGGTTATGCC
CAGAATGGCCAGCCTCAGCAAGCATTGCTGCTGTTTGAGGATATGAGATTAGCAGGAGTT
AGACCAAACAAGATTACCTTTGTAGGTGTTCTTTCAGCTTGTAGTCATGCTGGAATGGTT
GATGAAGCATTGGATTACTTTCAGATGATGAAAAATGAGTACAAAATCACTCCTGTGATG
GACCATTATGCATGCCTAATCGATATGTTTGTTAGGTTGGGTCGGTTAGACGAAGCTTTT
GATTTCATAAAAGAGATGGATTTGGAGCCCAATGAGTTTATATGGTCGATCTTGATTGCA
GGCTGTAGAAGTCAAGGGAAATTGGAGTTAGGGTTTTATGCGGCAGAACAGTTACTCAAC
CTGAAGCCAAAAGATACAGAGACCTACAACCTTTTGTTGAACATGTACCTTTCAGCAGGG
AAATGGAAGGAAGTTTCAAGGGTGAGAAAAATGATGAAAGAAGAGAAACTTGGAAGATTA
AAGGATTGGAGCTGGATTAGCATCAAGGACAAGATTTATTCATTCAAACGCAATGCCCGG
TCACATGCACAGAGTGGGGAGATGTATGAATTGTTGGGGAACTTGCATGAGAAAGCAAAG
AGTTTTGGATATGAATGGGAAGAAAGCTTAGAGGTGACCGATGAGGAGGAAGATGCTGAT
GAGGAGAAGGCATTAACTTCCATTGTTTATCACAGTGAAAAATTGGCTATTGCATTTGGG
CTGTTGAACACATCAAATGCTGTACCAATACGGGTTACGAAGAGTATTAGCATGTGCAGG
GATTGCCACAATTTTATTAGGATCATCTCGTTGCTGTCTGCTCGGGAAATCATCATTCGG
GATAGCAAGCGGCTTCACAAATTCATCAACGGACACTGTTCATGTGGAGATTTTGGAACT
CTAATCTGATCTTTTTTTTTTTTGCTTCATTTGTTGTTACATGGGCATTCAACACCGGTA
ATCACCCAATGGGAATAGCTTACTTGATGTGGCCGTTTTACCTTTACCCAGGATGACTAC
TCTTTTGTAATATTTTTCTCTAAATAGAGCTGTTGCCAAGGAGACATAAATTTAAGGCGT
TGTGGTTCAACCACATCAACAAACCCCAAATCTGTTATGAACTTGGTGCTATTTACCTCC
CACGAGGACTAATTAAGTCCCCTTTGTGATTTTACAGGGAATTTGAACATCAAGTAGGCA
GCATAATCACCAATACAAAAATAGTCCTTTTATTCTGTGCGACAAATCATACGTCGTACA
TGGATTTGATTCTGAAAACAATCAAAGTTTATACTTTTG