Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g07830.t01
CDS Infomation

cds chromosome:12X:18:6278216:6282589:-1 gene:VIT_18s0001g07830 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription initiation factor IIA subunit 2 [Source:UniProtKB/TrEMBL;Acc:A5AJ11]
Sequence

ATGGCAACGTTTGAACTTTATCGTAGATCGACGATCGGGATGTGTTTGACGGAAACATTG
GACGAGATGGTTCAGAATGGTACTTTGAGTCCAGAGCTCGCCATTCAAGTTCTTGTCCAG
TTCGACAAGTCTATGACTGAAGCTCTGGAAAGTCAAGTTAAAAGCAAGGTCACCATTAAG
GGACATCTGCACACCTACAGATTCTGCGACAATGTGTGGACCTTCATCTTACAAGATGCT
CTGTTTAAAAATGAGGAATCCCAGGAGAATGTTGGTCGGGTTAAAATAGTCGCATGCGAC
TCAAAGCTGCTGACACAATGA

Peptide Sequence

PEP ID

VIT_18s0001g07830.t01
PEP Infomation

pep chromosome:12X:18:6278216:6282589:-1 gene:VIT_18s0001g07830 transcript:VIT_18s0001g07830.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription initiation factor IIA subunit 2 [Source:UniProtKB/TrEMBL;Acc:A5AJ11]
Sequence

MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK
GHLHTYRFCDNVWTFILQDALFKNEESQENVGRVKIVACDSKLLTQ

Transcript Sequence

Transcript ID

VIT_18s0001g07830.t01
Transcript Infomation

cdna chromosome:12X:18:6278216:6282589:-1 gene:VIT_18s0001g07830 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription initiation factor IIA subunit 2 [Source:UniProtKB/TrEMBL;Acc:A5AJ11]
Sequence

CACACTCGTTGGAACAATCCAAGAGCCCAAGAACCAGGAGAGAAAAGCCGGCAATTTTGT
CTCTGCTTCCTCTCTCTTCCATCACCATCTATCATCGTAAGAATGGCAACGTTTGAACTT
TATCGTAGATCGACGATCGGGATGTGTTTGACGGAAACATTGGACGAGATGGTTCAGAAT
GGTACTTTGAGTCCAGAGCTCGCCATTCAAGTTCTTGTCCAGTTCGACAAGTCTATGACT
GAAGCTCTGGAAAGTCAAGTTAAAAGCAAGGTCACCATTAAGGGACATCTGCACACCTAC
AGATTCTGCGACAATGTGTGGACCTTCATCTTACAAGATGCTCTGTTTAAAAATGAGGAA
TCCCAGGAGAATGTTGGTCGGGTTAAAATAGTCGCATGCGACTCAAAGCTGCTGACACAA
TGAGATGTAGGCGACTGGCATGTTCAATAAAGAGAATATTAGTTTTATCTGCTGTTAGTA
GAGGGTGATGGTGGCCAGGAAGATTAGAGAGAGTTTGTGCAATCAGTTGCAGCAGGCAAC
CATGTAAGAATGCATATAAATTGTAAAAGCCATCAACCTAGTATAATTATTTGATGTTAC
A