Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g07680.t01
CDS Infomation

cds chromosome:12X:18:5930202:5935355:1 gene:VIT_18s0001g07680 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCACGGACGACCTCGCAAAGCCCCGAAACCCGAAGACGCAGCAGCTTCAGCGGCCAAA
GCTGAAAAGCTACGCGCTCTTCAATCTCAGCTCCTTCACAATCATCACAATCAGATATAT
ACGAAGGAAGCCCTAGAGATCTCCGCCAAGCTACTTGAAGCCAATCCCGAATCATACACA
GCTTGGAATTATAGGAAGCTCGCTGTTGAACATAATCTGAGTCACTCCGAGTCTGATCCG
GATACAGTCAAATCAATTTTCAGCGAGGAACTTAGAGTCGTAGAGAACTCATTGAAGCAG
AATTTTAAGTCTTATGGAGCGTGGCACCATCGTAAATGGGTTCTGAGCAAGGGACATTCA
TCAGTAGATCATGAATTGCAGCTACTGGATCGGTTTCAGAGGGCTGATTCTCGGAATTTC
CATGCCTGGAATTATCGTCGATTTATTGCGGCCTTGAAGGGCATACCTGATGAGGAGGAG
TTGAAGTATACAACCAAATTAATAGAGACAAATTTCAGCAATTATTCTGCATGGCACAAT
CGTAGTGTACTTTTGTCCCATTTGCTGCAAAACAAGGTCAAAGGGTTTTTCCCAAAGGAA
AAGGTTTTGGTAGAAGAGTATGAATTTGTACATCAAGCTCTTTTCACTGATCCAGATGAT
CAAAGTGGTTGGTTTTATCATCTTTGGCTTCTTGATCAAACTGTTAAACCAGAAACTCCT
CTGCTGGTTTCTACTTGGCCTGCTCATGGTTCTGATATCATTGTATCAGCAGAAGGCTGC
CTGGATGGCCGTGCTTTGTCTCCATTCACAAGTTTCCACTCTGATGCAGGAACATTTCCT
CTCATTCTTTACTTCAATGAAGCTGTTGAAGGTGTAAACTCATCTACTGTAACTGTTAAA
TCAGTGTTTACTGAAAATAAAGATCTTGTTTGGAAACCACTTGCAACAAGTAAGTCCTGT
GCTGCCCAAGCATGGGTAACACATCTAAATGTTCCTGATGTAAAGCTCCATCCTTCAACA
GCTTATCCCATAGAAGTTAATCTTGGAGACTCTCAGGGAATAATTTCTTTGAGTGGTTCT
CACTGTAGCCATCCTTCTCGGTTTGCATTTACAGTGTGTGTACAGCCTCTCAGTTCAAAA
CATGCTGAAAGGCAGAGTGTAGAGATGATTTTGTGGAGAGATGTAAATTTTCATTTTTAT
GATGCACATGTCCAAGAATCAAGCCCAATTGCTTATTTTGATCGACTAAGCATTAAAAAG
GACCATGAGCCAGCAGCTTCTAAGTGGCATGCAAAGACTCTAGTTAATGAGATAGCCCTT
GTTCGGCAACTGTTGTCAGAGATAGACTGTAAAATTGGAAAGCTTACTCTTGCAAGACTG
CTGATGGCTCATGATGCAATGGTGTCATACATGGCTCCACATTCTCACAAGAAGGTCCAT
TCTGAAGAAGTTCTACAACTATATAGTGACCTAATGGAGTTGGACCCAATGCATTCCCAA
TACTATAAGGAGGCACAAAGCTTAGTCTTATTGCAGCAGGTGACATCCAATAGGGAATCC
TTGCTGAAACACTGCTGCCACCATAGGGTCTCGACCTCTTCAAGTGTTGGTAATTCTGTC
TGTTTACGACTAAATAATTTGTCTTTATCAAGGATCGGATGTGTTGAGCAATTATTGTGG
GTCCAAATGCTTGACCTCAGCCACAATGAACTTCGATCAATTGATGGATTGGAGGCTATG
CAGCTTCTCTCTTTCCTGAACCTGAGTCATAATAAGCTTAGCAGTTTTACTGCTTTGGAG
CCTTTGAGACTGCTGAAGTTATTAAAGGTGTTGGACATCTCATACAATGAGATAGGTGCC
CACCCCGTTGACACAAGAAGGTATTTGTGCTCTTCTCCTTTGTCTCATACGGTAGGAAGT
GATTGGAATTTCAATGAATTTGTACCTGACGATGCCAAAGTGACAAACTACTGGGAGGCT
TTTGCGATTTTTAGAGGCTTCAATTTGACGCAATTGGATATTGTGGGGAATGCAATCACT
GATGAAAAATTCAAGTCATTTCTGATTAAGGTTCTCCCTACACTAAAGTGGGTAGACGGT
GAAGAATTGCATTAA

Peptide Sequence

PEP ID

VIT_18s0001g07680.t01
PEP Infomation

pep chromosome:12X:18:5930202:5935355:1 gene:VIT_18s0001g07680 transcript:VIT_18s0001g07680.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MHGRPRKAPKPEDAAASAAKAEKLRALQSQLLHNHHNQIYTKEALEISAKLLEANPESYT
AWNYRKLAVEHNLSHSESDPDTVKSIFSEELRVVENSLKQNFKSYGAWHHRKWVLSKGHS
SVDHELQLLDRFQRADSRNFHAWNYRRFIAALKGIPDEEELKYTTKLIETNFSNYSAWHN
RSVLLSHLLQNKVKGFFPKEKVLVEEYEFVHQALFTDPDDQSGWFYHLWLLDQTVKPETP
LLVSTWPAHGSDIIVSAEGCLDGRALSPFTSFHSDAGTFPLILYFNEAVEGVNSSTVTVK
SVFTENKDLVWKPLATSKSCAAQAWVTHLNVPDVKLHPSTAYPIEVNLGDSQGIISLSGS
HCSHPSRFAFTVCVQPLSSKHAERQSVEMILWRDVNFHFYDAHVQESSPIAYFDRLSIKK
DHEPAASKWHAKTLVNEIALVRQLLSEIDCKIGKLTLARLLMAHDAMVSYMAPHSHKKVH
SEEVLQLYSDLMELDPMHSQYYKEAQSLVLLQQVTSNRESLLKHCCHHRVSTSSSVGNSV
CLRLNNLSLSRIGCVEQLLWVQMLDLSHNELRSIDGLEAMQLLSFLNLSHNKLSSFTALE
PLRLLKLLKVLDISYNEIGAHPVDTRRYLCSSPLSHTVGSDWNFNEFVPDDAKVTNYWEA
FAIFRGFNLTQLDIVGNAITDEKFKSFLIKVLPTLKWVDGEELH

Transcript Sequence

Transcript ID

VIT_18s0001g07680.t01
Transcript Infomation

cdna chromosome:12X:18:5930202:5935355:1 gene:VIT_18s0001g07680 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGAGTTTGTTCCTTGTCGCACAGTCACACTTGGTTTCTCTCTCGAGGAAAATGCACGGAC
GACCTCGCAAAGCCCCGAAACCCGAAGACGCAGCAGCTTCAGCGGCCAAAGCTGAAAAGC
TACGCGCTCTTCAATCTCAGCTCCTTCACAATCATCACAATCAGATATATACGAAGGAAG
CCCTAGAGATCTCCGCCAAGCTACTTGAAGCCAATCCCGAATCATACACAGCTTGGAATT
ATAGGAAGCTCGCTGTTGAACATAATCTGAGTCACTCCGAGTCTGATCCGGATACAGTCA
AATCAATTTTCAGCGAGGAACTTAGAGTCGTAGAGAACTCATTGAAGCAGAATTTTAAGT
CTTATGGAGCGTGGCACCATCGTAAATGGGTTCTGAGCAAGGGACATTCATCAGTAGATC
ATGAATTGCAGCTACTGGATCGGTTTCAGAGGGCTGATTCTCGGAATTTCCATGCCTGGA
ATTATCGTCGATTTATTGCGGCCTTGAAGGGCATACCTGATGAGGAGGAGTTGAAGTATA
CAACCAAATTAATAGAGACAAATTTCAGCAATTATTCTGCATGGCACAATCGTAGTGTAC
TTTTGTCCCATTTGCTGCAAAACAAGGTCAAAGGGTTTTTCCCAAAGGAAAAGGTTTTGG
TAGAAGAGTATGAATTTGTACATCAAGCTCTTTTCACTGATCCAGATGATCAAAGTGGTT
GGTTTTATCATCTTTGGCTTCTTGATCAAACTGTTAAACCAGAAACTCCTCTGCTGGTTT
CTACTTGGCCTGCTCATGGTTCTGATATCATTGTATCAGCAGAAGGCTGCCTGGATGGCC
GTGCTTTGTCTCCATTCACAAGTTTCCACTCTGATGCAGGAACATTTCCTCTCATTCTTT
ACTTCAATGAAGCTGTTGAAGGTGTAAACTCATCTACTGTAACTGTTAAATCAGTGTTTA
CTGAAAATAAAGATCTTGTTTGGAAACCACTTGCAACAAGTAAGTCCTGTGCTGCCCAAG
CATGGGTAACACATCTAAATGTTCCTGATGTAAAGCTCCATCCTTCAACAGCTTATCCCA
TAGAAGTTAATCTTGGAGACTCTCAGGGAATAATTTCTTTGAGTGGTTCTCACTGTAGCC
ATCCTTCTCGGTTTGCATTTACAGTGTGTGTACAGCCTCTCAGTTCAAAACATGCTGAAA
GGCAGAGTGTAGAGATGATTTTGTGGAGAGATGTAAATTTTCATTTTTATGATGCACATG
TCCAAGAATCAAGCCCAATTGCTTATTTTGATCGACTAAGCATTAAAAAGGACCATGAGC
CAGCAGCTTCTAAGTGGCATGCAAAGACTCTAGTTAATGAGATAGCCCTTGTTCGGCAAC
TGTTGTCAGAGATAGACTGTAAAATTGGAAAGCTTACTCTTGCAAGACTGCTGATGGCTC
ATGATGCAATGGTGTCATACATGGCTCCACATTCTCACAAGAAGGTCCATTCTGAAGAAG
TTCTACAACTATATAGTGACCTAATGGAGTTGGACCCAATGCATTCCCAATACTATAAGG
AGGCACAAAGCTTAGTCTTATTGCAGCAGGTGACATCCAATAGGGAATCCTTGCTGAAAC
ACTGCTGCCACCATAGGGTCTCGACCTCTTCAAGTGTTGGTAATTCTGTCTGTTTACGAC
TAAATAATTTGTCTTTATCAAGGATCGGATGTGTTGAGCAATTATTGTGGGTCCAAATGC
TTGACCTCAGCCACAATGAACTTCGATCAATTGATGGATTGGAGGCTATGCAGCTTCTCT
CTTTCCTGAACCTGAGTCATAATAAGCTTAGCAGTTTTACTGCTTTGGAGCCTTTGAGAC
TGCTGAAGTTATTAAAGGTGTTGGACATCTCATACAATGAGATAGGTGCCCACCCCGTTG
ACACAAGAAGGTATTTGTGCTCTTCTCCTTTGTCTCATACGGTAGGAAGTGATTGGAATT
TCAATGAATTTGTACCTGACGATGCCAAAGTGACAAACTACTGGGAGGCTTTTGCGATTT
TTAGAGGCTTCAATTTGACGCAATTGGATATTGTGGGGAATGCAATCACTGATGAAAAAT
TCAAGTCATTTCTGATTAAGGTTCTCCCTACACTAAAGTGGGTAGACGGTGAAGAATTGC
ATTAACCTTCAAATAATTTTTTTCTCCTTTATTTACATATATCTCTCTGTTTCTCAATAC
AGTTAGGCATACCATGTTTCTGCTGTTATCATAACTACTAAATTTATTGAAGAACCTTTT
GCTTTGTTAAAGACA