Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g07490.t01
CDS Infomation

cds chromosome:12X:18:5743382:5750676:1 gene:VIT_18s0001g07490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGCTGTTGGAGGAGTTGAACCCATCTCAGAGAGTAGCATTGGGAGGTCTATTGGTG
ATCCTGTTGCCATGTTTCTTCCCCACTCTCTTCACTCCCTTGGGCCGTGCTTCCCCGTCC
ATTTTCTCCGAATGGAATGCTCCAAAACCTAGGCATTTACAGCTACTGAAGGGCGCCTTG
CAACTCCAAACTCCTGATAGGCAACAAGCCAATCTCTGGTCTCCATTAGCTAACCAAGGA
TGGAAACCCTGTGTTGACTCTGCAGACACCCCTTTGTTGCCAAAGAAATCTCAGGGGTAT
GTCCAAGTATTTCTTGATGGAGGGTTAAACCAGCAGAGAATGGGGATCTGTGATGCAGTT
GCTGTTGCAAAGATTTTGAATGCAACCCTTGTGATCCCTCACCTTGAAGTGAATCCTGTT
TGGCAAGATTCAAGTTCATTCGCAGAAATATTTGATATTGATCATTTTATTAATGTCCTG
AAAGATGACATTTTTATAGCTAAAGAGTTGCCTAGCAAATATTCTTGGAGCACAAGGGAG
TATTACGCAACCGGCATACGGGCTACTAGAATTAAAACTGCACCTATTCATGCTTCAGCT
ATTTGGTATCTGGAAAATGTCTTACCTGTATTGCAGAGTTATGGAATTGCTGCTCTTGCC
CCATTCTCTCATCGTTTGGCTTTTGACAACTTACCTGCGTACATCCAACGCTTACGCTGC
AAAGTTAATTTCAAAGCACTAGTTTTTGTTCCTCATATCAAAGCATTGGGAGAGGCCCTT
GTCAATCACATCCGATATCTGCCTATTGAAAGCAGAGCAGGAGGGACTGAGTACCTGCAG
GATAGAACAGATGAGATTAACCACAAGCAAGGGGCTGGGAAGTTTGTTGTGTTACATCTT
CGCTTTGATAAAGATATGGCTGCTCATTCAGCCTGTGATTTTGGTGGAGGTAAAGCTGAA
AAAATGGCTCTTGCAAAATACCGTCAAGTGATTTGGCAGGGAAGGGTCCTAAAATCTCAG
TTCACAGATGAGGAATTGAGAAATCAAGGGCGCTGCCCATTGACTCCTGAAGAGATTGGA
TTGCTTCTAGCAGCTTTGGGCTTCAGTAACACTACCCGTCTCTATCTTGCTTCCCACAAG
GTTTATGGTGGAGAGGCTAGGATCTCAACTTTGCGCAAATTGTTTCCCTTAATGGAAGAT
AAAAAGAGCCTTGCTTCTGCAGAGGAACTGGCGAAGGTTGAAGGGAAGGCTTCTTTATTG
GCTGCAGTTGATTATTATGTGAGCATGCACAGTGACATCTTCATCTCTGCTTCTCCGGGC
AATATGCACAATGCGTTGGTGGGACACCGAGCTTACAAGAACTTGAAGACTATAAGACCG
AACATGGCATTGTTGGGCCAGCTCTTCCTGAATAAGAGCATTGAATGGTCAGAATTTCAG
CAGGCAGTTCTGAATGGGCATAAAAGTAGACAAGGGCAAATCAGGTTTAGAAAGGAGAAT
CAATCCATATATACATATCCTATTACTGATTGCATGTGTCAAGCTTAA

Peptide Sequence

PEP ID

VIT_18s0001g07490.t01
PEP Infomation

pep chromosome:12X:18:5743382:5750676:1 gene:VIT_18s0001g07490 transcript:VIT_18s0001g07490.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKLLEELNPSQRVALGGLLVILLPCFFPTLFTPLGRASPSIFSEWNAPKPRHLQLLKGAL
QLQTPDRQQANLWSPLANQGWKPCVDSADTPLLPKKSQGYVQVFLDGGLNQQRMGICDAV
AVAKILNATLVIPHLEVNPVWQDSSSFAEIFDIDHFINVLKDDIFIAKELPSKYSWSTRE
YYATGIRATRIKTAPIHASAIWYLENVLPVLQSYGIAALAPFSHRLAFDNLPAYIQRLRC
KVNFKALVFVPHIKALGEALVNHIRYLPIESRAGGTEYLQDRTDEINHKQGAGKFVVLHL
RFDKDMAAHSACDFGGGKAEKMALAKYRQVIWQGRVLKSQFTDEELRNQGRCPLTPEEIG
LLLAALGFSNTTRLYLASHKVYGGEARISTLRKLFPLMEDKKSLASAEELAKVEGKASLL
AAVDYYVSMHSDIFISASPGNMHNALVGHRAYKNLKTIRPNMALLGQLFLNKSIEWSEFQ
QAVLNGHKSRQGQIRFRKENQSIYTYPITDCMCQA

Transcript Sequence

Transcript ID

VIT_18s0001g07490.t01
Transcript Infomation

cdna chromosome:12X:18:5743382:5750676:1 gene:VIT_18s0001g07490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAAACGGCGTCGTTGGCTGTCCCAATTCACGTTCAGGGTTAGGGTTAGTGGTGTAATGCG
TGATCTGGGACGATGAAGCTGTTGGAGGAGTTGAACCCATCTCAGAGAGTAGCATTGGGA
GGTCTATTGGTGATCCTGTTGCCATGTTTCTTCCCCACTCTCTTCACTCCCTTGGGCCGT
GCTTCCCCGTCCATTTTCTCCGAATGGAATGCTCCAAAACCTAGGCATTTACAGCTACTG
AAGGGCGCCTTGCAACTCCAAACTCCTGATAGGCAACAAGCCAATCTCTGGTCTCCATTA
GCTAACCAAGGATGGAAACCCTGTGTTGACTCTGCAGACACCCCTTTGTTGCCAAAGAAA
TCTCAGGGGTATGTCCAAGTATTTCTTGATGGAGGGTTAAACCAGCAGAGAATGGGGATC
TGTGATGCAGTTGCTGTTGCAAAGATTTTGAATGCAACCCTTGTGATCCCTCACCTTGAA
GTGAATCCTGTTTGGCAAGATTCAAGTTCATTCGCAGAAATATTTGATATTGATCATTTT
ATTAATGTCCTGAAAGATGACATTTTTATAGCTAAAGAGTTGCCTAGCAAATATTCTTGG
AGCACAAGGGAGTATTACGCAACCGGCATACGGGCTACTAGAATTAAAACTGCACCTATT
CATGCTTCAGCTATTTGGTATCTGGAAAATGTCTTACCTGTATTGCAGAGTTATGGAATT
GCTGCTCTTGCCCCATTCTCTCATCGTTTGGCTTTTGACAACTTACCTGCGTACATCCAA
CGCTTACGCTGCAAAGTTAATTTCAAAGCACTAGTTTTTGTTCCTCATATCAAAGCATTG
GGAGAGGCCCTTGTCAATCACATCCGATATCTGCCTATTGAAAGCAGAGCAGGAGGGACT
GAGTACCTGCAGGATAGAACAGATGAGATTAACCACAAGCAAGGGGCTGGGAAGTTTGTT
GTGTTACATCTTCGCTTTGATAAAGATATGGCTGCTCATTCAGCCTGTGATTTTGGTGGA
GGTAAAGCTGAAAAAATGGCTCTTGCAAAATACCGTCAAGTGATTTGGCAGGGAAGGGTC
CTAAAATCTCAGTTCACAGATGAGGAATTGAGAAATCAAGGGCGCTGCCCATTGACTCCT
GAAGAGATTGGATTGCTTCTAGCAGCTTTGGGCTTCAGTAACACTACCCGTCTCTATCTT
GCTTCCCACAAGGTTTATGGTGGAGAGGCTAGGATCTCAACTTTGCGCAAATTGTTTCCC
TTAATGGAAGATAAAAAGAGCCTTGCTTCTGCAGAGGAACTGGCGAAGGTTGAAGGGAAG
GCTTCTTTATTGGCTGCAGTTGATTATTATGTGAGCATGCACAGTGACATCTTCATCTCT
GCTTCTCCGGGCAATATGCACAATGCGTTGGTGGGACACCGAGCTTACAAGAACTTGAAG
ACTATAAGACCGAACATGGCATTGTTGGGCCAGCTCTTCCTGAATAAGAGCATTGAATGG
TCAGAATTTCAGCAGGCAGTTCTGAATGGGCATAAAAGTAGACAAGGGCAAATCAGGTTT
AGAAAGGAGAATCAATCCATATATACATATCCTATTACTGATTGCATGTGTCAAGCTTAA
CTGTAA