Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g07430.t01
CDS Infomation

cds chromosome:12X:18:5672890:5681066:-1 gene:VIT_18s0001g07430 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAGGTAAACGTCTAGCAAGTAGTAAAAGTCATGTTGTCAAGGAAGAGGAAGAGAAA
GCAGCTGATCAATTGAGGGGAAAGGTCTTGCCTGGGGATTTAATATGGGTCAGGCTCCGT
GGGTTATCATGGTGGCCAGCTCAGGTTGTTAATGAGAATGCTGTGAGTAGAAGCAATAAA
CCTGGTAATAGATCAGAGGATGAAGTTCTTGTTCGTGTGTATGGAACCTATAACTACTTG
TATGTGGATCCAATGAAATGTCGTTCTGAATTTGAGAATATACTCAAGCAGAATAATTGT
AGTTACAGAGAAATATTTCAGAAGGCTCTGGAGCAGGATCTTCCTAGTGCTAAGTGTGGT
AGATCGAAGGGGCGAGGATCCAAATCCAAAGAAAGTGCTGAGGAAGTGGAAAGCAAAACC
TTTAAAGAGAATGGGGAACTGAAGAAACTCAAACTGAAGAGGCCAAGTGCCAAGTGGGAA
GCAAAATGCAAAACCTCTAAGCAAAATGGGGTGCAGAAGGAACCAAAGCCAACTAGCCTG
AGCAATGAAGATGATACAAAATGCAGAACCTCTCAGCATAGTGGGGTGCAAAAGAAACAC
AATCCAAATAGCTTAAGCACTGATGCTAAAAAAGAAGCAAAAAGCAAAACTGTTAAGGAT
GCAGGGTTGCAGAAAAAACTTGTGCCAAATAGCCCAAGTGCACGCAAGGAAGCGAAAGGA
AAAACTCCTAAGCAAGATGTGGTGCAGAAGAAACTTGAGTTGATTGATGCAAAAGAGCAA
AGCAATACCCCTACGCAAGATGGTGTACTGCAAAAAAAACGCAGGCCAAGTAGCCAATGC
TATGAGGAGGCATCAGAAAGTAAAACCTTGAAACAAGATGGGGCACAAAAGAAACTCAAG
CTAAATAGCCCAAGCACTGAGAAGGAAGCAAAAAGGAAAACCTCTAAAAAGGATGACATG
CTGAAGAAGCTCAATTCGAATAGCCCATGCACGGCAACATCTTCAACAAGGAAGACTAGT
GAAAAAATATCTTCAAGGAAGTCTCACATACTCAATGCACGGAGAATGAGAGTTATGCGG
AGCCTTGGTCTCACTGCTCCTTCTGGATCTCCGTTTGATAGAAATGGACATACTTAG

Peptide Sequence

PEP ID

VIT_18s0001g07430.t01
PEP Infomation

pep chromosome:12X:18:5672890:5681066:-1 gene:VIT_18s0001g07430 transcript:VIT_18s0001g07430.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKGKRLASSKSHVVKEEEEKAADQLRGKVLPGDLIWVRLRGLSWWPAQVVNENAVSRSNK
PGNRSEDEVLVRVYGTYNYLYVDPMKCRSEFENILKQNNCSYREIFQKALEQDLPSAKCG
RSKGRGSKSKESAEEVESKTFKENGELKKLKLKRPSAKWEAKCKTSKQNGVQKEPKPTSL
SNEDDTKCRTSQHSGVQKKHNPNSLSTDAKKEAKSKTVKDAGLQKKLVPNSPSARKEAKG
KTPKQDVVQKKLELIDAKEQSNTPTQDGVLQKKRRPSSQCYEEASESKTLKQDGAQKKLK
LNSPSTEKEAKRKTSKKDDMLKKLNSNSPCTATSSTRKTSEKISSRKSHILNARRMRVMR
SLGLTAPSGSPFDRNGHT

Transcript Sequence

Transcript ID

VIT_18s0001g07430.t01
Transcript Infomation

cdna chromosome:12X:18:5672890:5681066:-1 gene:VIT_18s0001g07430 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTTTTTTTTGCCAAAACGCGCCGTTTCAGATCTCGATCGCTTCGAAGTCGAAACGGCGC
AGGACATGCGGCGTCCGGGAATTCTCTGCTACAGTCGAGCAGACTTCAGCATTCTACTGC
TTGTTTTGGAACGACGCCGTTCTGTGGGGCGAAGGAAAATGAAATAACCAAAACTTGAGG
GTCGATTGTGGAGAAATTAGGGAAGGTTGAGGGCATTGAGGGGTGAAAATCAGAAAGAGG
ACTCCCTTGATCTACAGTAGTAGTTTCCCGAAAAAACGAAAAAGGAAAGAGGGGTGGGAA
AGGCGAAGGAAGAAAGGGGCGGCGTCAAATCAGGAAGTGACAGAAGCCCATAAAAGGCTG
GCCCTTTACTCTCTCTTCCCTCCAGTTTCAATACACCCTTTGGGTCCGAAGCAAATATTT
TCTACATCCCCAATCTAGCTTACTATAACAAGCTACAAAGTTAATTATGAAAGGTAAACG
TCTAGCAAGTAGTAAAAGTCATGTTGTCAAGGAAGAGGAAGAGAAAGCAGCTGATCAATT
GAGGGGAAAGGTCTTGCCTGGGGATTTAATATGGGTCAGGCTCCGTGGGTTATCATGGTG
GCCAGCTCAGGTTGTTAATGAGAATGCTGTGAGTAGAAGCAATAAACCTGGTAATAGATC
AGAGGATGAAGTTCTTGTTCGTGTGTATGGAACCTATAACTACTTGTATGTGGATCCAAT
GAAATGTCGTTCTGAATTTGAGAATATACTCAAGCAGAATAATTGTAGTTACAGAGAAAT
ATTTCAGAAGGCTCTGGAGCAGGATCTTCCTAGTGCTAAGTGTGGTAGATCGAAGGGGCG
AGGATCCAAATCCAAAGAAAGTGCTGAGGAAGTGGAAAGCAAAACCTTTAAAGAGAATGG
GGAACTGAAGAAACTCAAACTGAAGAGGCCAAGTGCCAAGTGGGAAGCAAAATGCAAAAC
CTCTAAGCAAAATGGGGTGCAGAAGGAACCAAAGCCAACTAGCCTGAGCAATGAAGATGA
TACAAAATGCAGAACCTCTCAGCATAGTGGGGTGCAAAAGAAACACAATCCAAATAGCTT
AAGCACTGATGCTAAAAAAGAAGCAAAAAGCAAAACTGTTAAGGATGCAGGGTTGCAGAA
AAAACTTGTGCCAAATAGCCCAAGTGCACGCAAGGAAGCGAAAGGAAAAACTCCTAAGCA
AGATGTGGTGCAGAAGAAACTTGAGTTGATTGATGCAAAAGAGCAAAGCAATACCCCTAC
GCAAGATGGTGTACTGCAAAAAAAACGCAGGCCAAGTAGCCAATGCTATGAGGAGGCATC
AGAAAGTAAAACCTTGAAACAAGATGGGGCACAAAAGAAACTCAAGCTAAATAGCCCAAG
CACTGAGAAGGAAGCAAAAAGGAAAACCTCTAAAAAGGATGACATGCTGAAGAAGCTCAA
TTCGAATAGCCCATGCACGGCAACATCTTCAACAAGGAAGACTAGTGAAAAAATATCTTC
AAGGAAGTCTCACATACTCAATGCACGGAGAATGAGAGTTATGCGGAGCCTTGGTCTCAC
TGCTCCTTCTGGATCTCCGTTTGATAGAAATGGACATACTTAGCTTAGCTAGGTATCTTT
TAAAATCCTCAGAAAGTTTTCTGTTCAGTGGCATGGTATAGGTCCACTAATTTTTGCAAG
TTTCATCATTGTGTGACTAGTGAGAATTTTTTGTTTATACCCAGTTTGAATACATGGTCA
TTGGACTTATGCTCCTTGCCTTTTTTCTTGTCCAGTGCAAGGCTTGCACATAAGGTTTGT
GAAGGCCATGTTAATCTTAACTTGATATGAATTGAAATATCCCATCTGGATGTTGGGTCT
GGATTCTGTGAATTGAACTATGTGTTGTTACCTTTTGAAACCTTAATCTTGATGTTGGTT
ACAATCTGATGCTGCTTTTGTGGTGTGCACATAGACCAAAACCAAGCATGTAGTGTAAAA
GGAAAATTATGATACAGACTACTGTGTCATAGTCTTACCAACTCATACCATGATTTTATG
TCTAGATCATACACCATGCGAG