Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g07270.t01
CDS Infomation

cds chromosome:12X:18:5499153:5501603:-1 gene:VIT_18s0001g07270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGACGCACTCCTCTCGGCTTCGCTTCAAGTTCTATTCTACAGATTGGCTTCTGCA
GAGCTCATCAACTTCATCCGGGCACAAAAGCTCAGCCATGAACTCCTCACCAACTTTAAG
AGGAAATTGCTGGTTGTCCACAAAGCGCTCAATGATGCGGAGATGAAGCAATTTTCAGAC
CCACTAGTTAAAGACTGGCTGGTCCAAGTTAAGGATGTTGTGTATCACGCGGAGGACCTG
TTAGACGAGATCGCTACCGACGCTTTGCGGTCCCAGATCGAAGCTGCTGACTCCCAAGAT
AGCGGAACTCATCAGGTGTGGAACTGGAAAAAGGTCTCTGCTTGGGTTAAGGCTCCATTT
GCTAGTCAAAGTATGGAGTCCAGGGTCAAGGGCTTGATTTCTCTACTTGAAAACATTGCA
CAAGAAAAAGTTGAGCTAGGGCTGAAAGAAGGTGAGGGCGAGAAACTGTCACCAAGATCA
CCATCCACTTCTCTGGTGGATGAGTCCTTTGTGTACGGCAGGAATGAAATTAAAGAGGAG
ATGGTGAAGTGGTTGCTTTCTGATAAGGAAAATGCAACAGGCAACAACATAGATGTGATA
TCCATAATGGGCATGGGCGGCAGCGGCAAGACGACACTCGCTCAGCTTCTCTATAACCAT
GATAGAGTGAAGCAACACTTCCACTTGAAAGCATGGGTCTGTGTTTCCACCGAGTTTTTT
CTAATCGAGGAGGTAACAAAATCATTTCTTAAGGAAATCGGTTCTGAAACTAAATCAGAC
GACACCCTAAATTTGCTTCAGCTTAAACTCAAAGAGAGCGTAGGTAACAAGAAATTTCTG
CTCGTTCTCGACGACGTCTGGGATATGAAGTCTCTTGATTGGGATGGCCTACGAATTCCA
CTCCTCGCTGCAGCAGAGGGAAGCAAGATTGTTGTGACCAGTCGTAGTGAAACTGCTGCA
AAAATCATGCGTGCAATCCGTAGTCATCATCTGGGGACATTAAGCCCTGAAGATAGTTGG
TCCCTATTTACAAAACTCGCATTTCCAAATGGAGATTCCAGCGCTTATCCTCAGCTTGAA
ACTATTGGCAGAGAGATTGTGGACAAGTGCCAAGGATTGCCTTTGGCTGTAAAAGCACTC
GGGAGCCTCTTGGACTCTAAGGCCGATAAAAGAGAATGGGAAGATATTTTGAACAGCAAA
ACATGGCATTCCCAGACTGATCATGAAATTCTTCCATCTTTTAGATTGAGTTATCAGCAT
CTTTCTCCCCCTGTGAAGCGTTGTTTTGCTTACTGTTCAATTTTTGCTAAGGACCATGAA
TTTGACAAAAAGAAGCTGATTCTATTATGGATGGCAGAAGGGCTTTTACACGCGGGACAA
AGGGACGAAAGAATGGAAGAGGTAGGTGAGTCATGTTTTAATGAGCTTGTAGCAAAGTCA
TTTTTCCAAAAATCTATTACAAAAGAATCATGTTTTGTAATACATGATTTAATACATGAC
TTGGCTCAACATATCTCAGGAGAATTTTGTGTTCAATTGGAACAGTATAAGGTGCAAAAA
ATAACTGAGATGACTCGCCATTTTCGCTACTCTAATAGTGATGATGACAGGATGGTTGTA
TTTCAAAAGTTTGAGGCTGTTGGTGAAGCTAAACATCTTAGAACCTTTCTGGACGAGAAG
AAATATCCATACTTCGGGTTTTATACATTGAGTAAAAGAGTTTTACAAAATATATTACCA
AAATTTAAATCCTTGCGTGTGTTGTCATTGTGTGCATACAAGATAACTGAAGTGCCTGAT
TCAATACACAATTTAACACAATTGTGTTACTTGGATAGTTGGATCTCTCCTCAACACAGA
TTCAAAGATTACCTGAATCAGTATGTTGTTTATGCAATTTGCAAACAATGA

Peptide Sequence

PEP ID

VIT_18s0001g07270.t01
PEP Infomation

pep chromosome:12X:18:5499153:5501603:-1 gene:VIT_18s0001g07270 transcript:VIT_18s0001g07270.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MADALLSASLQVLFYRLASAELINFIRAQKLSHELLTNFKRKLLVVHKALNDAEMKQFSD
PLVKDWLVQVKDVVYHAEDLLDEIATDALRSQIEAADSQDSGTHQVWNWKKVSAWVKAPF
ASQSMESRVKGLISLLENIAQEKVELGLKEGEGEKLSPRSPSTSLVDESFVYGRNEIKEE
MVKWLLSDKENATGNNIDVISIMGMGGSGKTTLAQLLYNHDRVKQHFHLKAWVCVSTEFF
LIEEVTKSFLKEIGSETKSDDTLNLLQLKLKESVGNKKFLLVLDDVWDMKSLDWDGLRIP
LLAAAEGSKIVVTSRSETAAKIMRAIRSHHLGTLSPEDSWSLFTKLAFPNGDSSAYPQLE
TIGREIVDKCQGLPLAVKALGSLLDSKADKREWEDILNSKTWHSQTDHEILPSFRLSYQH
LSPPVKRCFAYCSIFAKDHEFDKKKLILLWMAEGLLHAGQRDERMEEVGESCFNELVAKS
FFQKSITKESCFVIHDLIHDLAQHISGEFCVQLEQYKVQKITEMTRHFRYSNSDDDRMVV
FQKFEAVGEAKHLRTFLDEKKYPYFGFYTLSKRVLQNILPKFKSLRVLSLCAYKITEVPD
SIHNLTQLCYLDSWISPQHRFKDYLNQYVVYAICKQ

Transcript Sequence

Transcript ID

VIT_18s0001g07270.t01
Transcript Infomation

cdna chromosome:12X:18:5499153:5501603:-1 gene:VIT_18s0001g07270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAGGCATTGAAAAGTTGGCAAGTACTTGCTGCTAATTGATAAGAGTCTCTTTTCTAGGTG
TTAAGGTAAATTCAAAACCAGCTGTGAACTCTGTCTATGTAGAAATTTTGGCAACTCCAC
AAAAAGTCTCGCAAGCGTGGTGTGGACATGGAGCTTGCATTCTTATCTCAACTCTGTGTG
TTTGACCGCTGGGTGGTGGGGTCTAGTGCTGAGTCCATCCCGCCATTGAACGCTTTTTAT
TTTGTATTTTTTAAAATTCCTATATTAAATGGTTAGCATCATGCTTTCCAGGAAAAAAAT
GTTAAAATAATAATTTTTTATGTTTGCTTTACTCACTCGTCAGGCAGTCACCACTCAATT
ATTGTGTTTGGCCAAAAAGTCAGCATCTGGGTCCACCACCATCAACGATTCCTTCAAAGC
CTAACGCACTTTGGCAATAGAGGCCTGCCTTGACTCTTTGCTCTGCAGTTTGCTGCAGTG
TTTGTGCATTCTGCTTATCTTCATTTTTCCTGTATTGAATCTCGCTGAATTCCTTTTGCA
ATGGCGGACGCACTCCTCTCGGCTTCGCTTCAAGTTCTATTCTACAGATTGGCTTCTGCA
GAGCTCATCAACTTCATCCGGGCACAAAAGCTCAGCCATGAACTCCTCACCAACTTTAAG
AGGAAATTGCTGGTTGTCCACAAAGCGCTCAATGATGCGGAGATGAAGCAATTTTCAGAC
CCACTAGTTAAAGACTGGCTGGTCCAAGTTAAGGATGTTGTGTATCACGCGGAGGACCTG
TTAGACGAGATCGCTACCGACGCTTTGCGGTCCCAGATCGAAGCTGCTGACTCCCAAGAT
AGCGGAACTCATCAGGTGTGGAACTGGAAAAAGGTCTCTGCTTGGGTTAAGGCTCCATTT
GCTAGTCAAAGTATGGAGTCCAGGGTCAAGGGCTTGATTTCTCTACTTGAAAACATTGCA
CAAGAAAAAGTTGAGCTAGGGCTGAAAGAAGGTGAGGGCGAGAAACTGTCACCAAGATCA
CCATCCACTTCTCTGGTGGATGAGTCCTTTGTGTACGGCAGGAATGAAATTAAAGAGGAG
ATGGTGAAGTGGTTGCTTTCTGATAAGGAAAATGCAACAGGCAACAACATAGATGTGATA
TCCATAATGGGCATGGGCGGCAGCGGCAAGACGACACTCGCTCAGCTTCTCTATAACCAT
GATAGAGTGAAGCAACACTTCCACTTGAAAGCATGGGTCTGTGTTTCCACCGAGTTTTTT
CTAATCGAGGAGGTAACAAAATCATTTCTTAAGGAAATCGGTTCTGAAACTAAATCAGAC
GACACCCTAAATTTGCTTCAGCTTAAACTCAAAGAGAGCGTAGGTAACAAGAAATTTCTG
CTCGTTCTCGACGACGTCTGGGATATGAAGTCTCTTGATTGGGATGGCCTACGAATTCCA
CTCCTCGCTGCAGCAGAGGGAAGCAAGATTGTTGTGACCAGTCGTAGTGAAACTGCTGCA
AAAATCATGCGTGCAATCCGTAGTCATCATCTGGGGACATTAAGCCCTGAAGATAGTTGG
TCCCTATTTACAAAACTCGCATTTCCAAATGGAGATTCCAGCGCTTATCCTCAGCTTGAA
ACTATTGGCAGAGAGATTGTGGACAAGTGCCAAGGATTGCCTTTGGCTGTAAAAGCACTC
GGGAGCCTCTTGGACTCTAAGGCCGATAAAAGAGAATGGGAAGATATTTTGAACAGCAAA
ACATGGCATTCCCAGACTGATCATGAAATTCTTCCATCTTTTAGATTGAGTTATCAGCAT
CTTTCTCCCCCTGTGAAGCGTTGTTTTGCTTACTGTTCAATTTTTGCTAAGGACCATGAA
TTTGACAAAAAGAAGCTGATTCTATTATGGATGGCAGAAGGGCTTTTACACGCGGGACAA
AGGGACGAAAGAATGGAAGAGGTAGGTGAGTCATGTTTTAATGAGCTTGTAGCAAAGTCA
TTTTTCCAAAAATCTATTACAAAAGAATCATGTTTTGTAATACATGATTTAATACATGAC
TTGGCTCAACATATCTCAGGAGAATTTTGTGTTCAATTGGAACAGTATAAGGTGCAAAAA
ATAACTGAGATGACTCGCCATTTTCGCTACTCTAATAGTGATGATGACAGGATGGTTGTA
TTTCAAAAGTTTGAGGCTGTTGGTGAAGCTAAACATCTTAGAACCTTTCTGGACGAGAAG
AAATATCCATACTTCGGGTTTTATACATTGAGTAAAAGAGTTTTACAAAATATATTACCA
AAATTTAAATCCTTGCGTGTGTTGTCATTGTGTGCATACAAGATAACTGAAGTGCCTGAT
TCAATACACAATTTAACACAATTGTGTTACTTGGATAGTTGGATCTCTCCTCAACACAGA
TTCAAAGATTACCTGAATCAGTATGTTGTTTATGCAATTTGCAAACAATGA