Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g07250.t01
CDS Infomation

cds chromosome:12X:18:5481660:5483870:1 gene:VIT_18s0001g07250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATATATTGCGAGTGAAGTTACTCATTTCCGAGTCGTTTTATCAAACATCTGGTGGA
CAAATCCAGATGACTAAGCCCTTTAAAAACCTCTGCTGTTTGATGAATCCGTTCCATGAA
TACCGTTGTTTCTCTTGTTCTCCTTCAGCACCTTCCTCTTCACTTCCCTGGATTTCTCCT
CTTCAGTACCTCAATGCCACCTCTCCCAAACCTGACCCTCCAGCCACCGAAGCCACAACC
ACCATGGTAGAACCTCGGAAGAAACCCAAATTCATCTCTCACGAGTCGGCTATCAACTTG
ATCAAACGCGAGACCGATCCGCAACGCGCACTTGAGATATTTAACAGGGTAGCGGAGCAA
AGGGGGTTCAGCCACAACAATGCTACATATGCTACCATCCTCCATAAGCTTGCCAAGTCC
AAGAAATTTCAGGCTATTGATGCGGTGCTTCACCAAATGACCTATGAAACTTGCAAATTT
CATGAGGGTATATTTCTTAACCTCATGAAACATTTCTCCAAGCTCTCTCTTCATGAGAGG
GTGGTTGAGATGTTTGATGCCATCCGCCCAATTGTCCGTGAAAAACCTTCTCTCAAAGCC
ATCAGCACTTGTCTCAATCTCCTGGTTGAGTCAAATCAGGTTGATTTGACCCGCAAGTTT
CTCTTGAATTCCAAGAAGAGTCTCAACTTGGAGCCCAATACCTGCATTTTCAACATTTTA
GTCAAGCATCACTGCAAGAATGGGGATATTGATTCTGCTTTTGAAGTCGTCGAGGAGATG
AAAAAGTCTCATGTTTCTTACCCAAACTTGATCACCTACTCTACGCTGATTAATGGTCTC
TGTGGAAGTGGAAGACTAAAAGAAGCCATTGAATTGTTTGAGGAAATGGTCTCAAAGGAT
CAGATATTGCCCGATGCCCTGACTTACAACGCTTTGATTAATGGGTTTTGCCATGGAGAG
AAGGTTGATCGAGCCCTGAAGATAATGGAGTTCATGAAGAAGAATGGATGCAACCCAAAT
GTATTTAATTACTCTGCCTTGATGAATGGCTTCTGTAAGGAGGGAAGACTGGAGGAGGCA
AAGGAGGTTTTTGATGAGATGAAAAGCTTAGGACTGAAGCCTGATACAGTCGGCTATACC
ACTTTAATTAATTTTTTCTGTAGGGCTGGTAGGGTCGATGAAGCTATGGAGTTGCTCAAA
GATATGAGAGAAAACAAGTGCAGAGCTGATACTGTAACTTTCAATGTGATACTCGGAGGA
TTGTGCAGAGAAGGAAGGTTCGAAGAGGCTCGTGGGATGCTTGAGAGGCTACCCTATGAG
GGTGTTTACTTGAACAAAGCAAGTTACAGGATCGTGTTGAATTCCTTGTGCAGGGAAGGT
GAATTGCAGAAGGCGACACAGCTTGTGGGCTTGATGCTGGGTAGGGGGGTTTTGCCCCAT
TTTGCTACCTCGAATGAGCTATTGGTTCATCTATGTGAGGCTGGAAAGGTGGGCGATGCA
GTTATGGCTTTGCTTGGATTATTAGAACTGGGGTTCAAACCAGAGCCCAATTCATGGGCT
CTTTTGGTTGAGTTGATTTGCAGGGAAAGAAAGCTATTGCCTGCATTTGAACTGCTCGAT
GACTTAGTTATACAAGAACCGTAA

Peptide Sequence

PEP ID

VIT_18s0001g07250.t01
PEP Infomation

pep chromosome:12X:18:5481660:5483870:1 gene:VIT_18s0001g07250 transcript:VIT_18s0001g07250.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNILRVKLLISESFYQTSGGQIQMTKPFKNLCCLMNPFHEYRCFSCSPSAPSSSLPWISP
LQYLNATSPKPDPPATEATTTMVEPRKKPKFISHESAINLIKRETDPQRALEIFNRVAEQ
RGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNLMKHFSKLSLHER
VVEMFDAIRPIVREKPSLKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNIL
VKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKD
QILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEA
KEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGG
LCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPH
FATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLD
DLVIQEP

Transcript Sequence

Transcript ID

VIT_18s0001g07250.t01
Transcript Infomation

cdna chromosome:12X:18:5481660:5483870:1 gene:VIT_18s0001g07250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATATATTGCGAGTGAAGTTACTCATTTCCGAGTCGTTTTATCAAACATCTGGTGGA
CAAATCCAGATGACTAAGCCCTTTAAAAACCTCTGCTGTTTGATGAATCCGTTCCATGAA
TACCGTTGTTTCTCTTGTTCTCCTTCAGCACCTTCCTCTTCACTTCCCTGGATTTCTCCT
CTTCAGTACCTCAATGCCACCTCTCCCAAACCTGACCCTCCAGCCACCGAAGCCACAACC
ACCATGGTAGAACCTCGGAAGAAACCCAAATTCATCTCTCACGAGTCGGCTATCAACTTG
ATCAAACGCGAGACCGATCCGCAACGCGCACTTGAGATATTTAACAGGGTAGCGGAGCAA
AGGGGGTTCAGCCACAACAATGCTACATATGCTACCATCCTCCATAAGCTTGCCAAGTCC
AAGAAATTTCAGGCTATTGATGCGGTGCTTCACCAAATGACCTATGAAACTTGCAAATTT
CATGAGGGTATATTTCTTAACCTCATGAAACATTTCTCCAAGCTCTCTCTTCATGAGAGG
GTGGTTGAGATGTTTGATGCCATCCGCCCAATTGTCCGTGAAAAACCTTCTCTCAAAGCC
ATCAGCACTTGTCTCAATCTCCTGGTTGAGTCAAATCAGGTTGATTTGACCCGCAAGTTT
CTCTTGAATTCCAAGAAGAGTCTCAACTTGGAGCCCAATACCTGCATTTTCAACATTTTA
GTCAAGCATCACTGCAAGAATGGGGATATTGATTCTGCTTTTGAAGTCGTCGAGGAGATG
AAAAAGTCTCATGTTTCTTACCCAAACTTGATCACCTACTCTACGCTGATTAATGGTCTC
TGTGGAAGTGGAAGACTAAAAGAAGCCATTGAATTGTTTGAGGAAATGGTCTCAAAGGAT
CAGATATTGCCCGATGCCCTGACTTACAACGCTTTGATTAATGGGTTTTGCCATGGAGAG
AAGGTTGATCGAGCCCTGAAGATAATGGAGTTCATGAAGAAGAATGGATGCAACCCAAAT
GTATTTAATTACTCTGCCTTGATGAATGGCTTCTGTAAGGAGGGAAGACTGGAGGAGGCA
AAGGAGGTTTTTGATGAGATGAAAAGCTTAGGACTGAAGCCTGATACAGTCGGCTATACC
ACTTTAATTAATTTTTTCTGTAGGGCTGGTAGGGTCGATGAAGCTATGGAGTTGCTCAAA
GATATGAGAGAAAACAAGTGCAGAGCTGATACTGTAACTTTCAATGTGATACTCGGAGGA
TTGTGCAGAGAAGGAAGGTTCGAAGAGGCTCGTGGGATGCTTGAGAGGCTACCCTATGAG
GGTGTTTACTTGAACAAAGCAAGTTACAGGATCGTGTTGAATTCCTTGTGCAGGGAAGGT
GAATTGCAGAAGGCGACACAGCTTGTGGGCTTGATGCTGGGTAGGGGGGTTTTGCCCCAT
TTTGCTACCTCGAATGAGCTATTGGTTCATCTATGTGAGGCTGGAAAGGTGGGCGATGCA
GTTATGGCTTTGCTTGGATTATTAGAACTGGGGTTCAAACCAGAGCCCAATTCATGGGCT
CTTTTGGTTGAGTTGATTTGCAGGGAAAGAAAGCTATTGCCTGCATTTGAACTGCTCGAT
GACTTAGTTATACAAGAACCGTAAAATCCTCCAATCTTTTAATCAGATGAGAGATGTGTT
TCAGAAGCAACAGGAAACGTTTGCTTGCTTGGCATAAAATTTGAAAACAAACTAATTGAA
ATGAATGAAGAAGAGAGAAATAATTATTTCTTTTTC