Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g07220.t01
CDS Infomation

cds chromosome:12X:18:5462890:5465587:-1 gene:VIT_18s0001g07220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCACCCAGTTTCGACTGTGCAGCCTCAAGCCTTCTGTGTGGAGAGGACAACAGCAGC
ATCTTTGATGATGCTGATTATGGCGCTGCGGCGGAGGAGTTTGAGACTGCATGGCATCAT
CAGAATCATCGAAGTCGTAATCAAGAGAAGAGCTTTAATGGCGGAGAGTTTTTGATTGGG
TTGCCAGTGCAGAGCGATGAGTGTTTGGCTTTGATGATTGAGAAGGAGTCCCAGCATTTG
CCTGCTGCTGATTACTTGATGAGGCTCAGGAGTGGGGATTTGGACATTGGGTCTAGACAG
GACGTTGTTGGTTGGATTGCAAAGGCTCACGCCCATTTCGGTTTTGGACCCCTGTGTGCA
TACTTGGCTATAAACTACCTGGATCGGTTCCTTTCCACCTATGAATTGCCTAAAGGTAAA
GCTTGGATGGCACAGTTGTTGGCTGTGGCTTGCTTGTCCCTTGCAGCCAAAATGGAGGAG
AATGAAGTTCCTTTGTGTCTTGATTTGCAGGTGGCCGAATCGAGATTTGTGTTTGAAGCC
AGAACCATACAGAGAATGGAGCTTCTGGTGCTGAGGACATTGAAGTGGAGAATGCAAGCC
GTGACCCCTTTCTCCTTCGTAGACTATTTTCTCCGCAGGATCAATGATGATGAATTCCCG
GCCAGAACTTCAATCTTGCTGTCAATTCAACTCATATTAAGCACAGTAAAAGGGATTGAC
TTCTTGGAATTCAGGCCTTCTGAGATTGCAGCAGCAGTGGCAATATCTATTGCAGGAGAA
ACCCAAACAGTGGACATTGAGAAGGCCATTTCTGTTGTCATTGAACCTATAGAAAAGGAG
AGAGTGCTCAAGTGTATTGAGCTGATGCATGATTTATCATTGATTAGTGGGTCTGTGAAG
CGTTCTAGTACTGCTGCTTCAGTCCCTTCTGTGCCCCACACCCCAATTGGTGTGCTGGAT
GCTGCATGCTTGAGCTATAAAAGTGATGATACAACAGTTGGATCATGTGCAAATTCTTCA
CATAACAAAAAGAGGAAGCTAAACGCACCCCCTGAAGTGGAGCTATAA

Peptide Sequence

PEP ID

VIT_18s0001g07220.t01
PEP Infomation

pep chromosome:12X:18:5462890:5465587:-1 gene:VIT_18s0001g07220 transcript:VIT_18s0001g07220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAPSFDCAASSLLCGEDNSSIFDDADYGAAAEEFETAWHHQNHRSRNQEKSFNGGEFLIG
LPVQSDECLALMIEKESQHLPAADYLMRLRSGDLDIGSRQDVVGWIAKAHAHFGFGPLCA
YLAINYLDRFLSTYELPKGKAWMAQLLAVACLSLAAKMEENEVPLCLDLQVAESRFVFEA
RTIQRMELLVLRTLKWRMQAVTPFSFVDYFLRRINDDEFPARTSILLSIQLILSTVKGID
FLEFRPSEIAAAVAISIAGETQTVDIEKAISVVIEPIEKERVLKCIELMHDLSLISGSVK
RSSTAASVPSVPHTPIGVLDAACLSYKSDDTTVGSCANSSHNKKRKLNAPPEVEL

Transcript Sequence

Transcript ID

VIT_18s0001g07220.t01
Transcript Infomation

cdna chromosome:12X:18:5462890:5465587:-1 gene:VIT_18s0001g07220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGAGACAGTCTTTTCAGCCTCGACTTTGATTGCGAGGGGGAGGGACAGCACTTTCTCTGT
ATTTCTCATTTGATTGGGATTTCATTTTTTCATTATTTGCTTCTCAATTCTTTCATGAAA
AATTTCTGTTTCTTCATCTACAAAATCTGAGAAAAATATATCAAACACAGTGAATAAAAT
CTGGGATTCATCCTCAACGGGTTGTTGTTTAGAGATTGAAGGATTTCAGTAAGGGAGAGT
GTTTCTAAGGCTTTTGCAGTTTAAAATGGCACCCAGTTTCGACTGTGCAGCCTCAAGCCT
TCTGTGTGGAGAGGACAACAGCAGCATCTTTGATGATGCTGATTATGGCGCTGCGGCGGA
GGAGTTTGAGACTGCATGGCATCATCAGAATCATCGAAGTCGTAATCAAGAGAAGAGCTT
TAATGGCGGAGAGTTTTTGATTGGGTTGCCAGTGCAGAGCGATGAGTGTTTGGCTTTGAT
GATTGAGAAGGAGTCCCAGCATTTGCCTGCTGCTGATTACTTGATGAGGCTCAGGAGTGG
GGATTTGGACATTGGGTCTAGACAGGACGTTGTTGGTTGGATTGCAAAGGCTCACGCCCA
TTTCGGTTTTGGACCCCTGTGTGCATACTTGGCTATAAACTACCTGGATCGGTTCCTTTC
CACCTATGAATTGCCTAAAGGTAAAGCTTGGATGGCACAGTTGTTGGCTGTGGCTTGCTT
GTCCCTTGCAGCCAAAATGGAGGAGAATGAAGTTCCTTTGTGTCTTGATTTGCAGGTGGC
CGAATCGAGATTTGTGTTTGAAGCCAGAACCATACAGAGAATGGAGCTTCTGGTGCTGAG
GACATTGAAGTGGAGAATGCAAGCCGTGACCCCTTTCTCCTTCGTAGACTATTTTCTCCG
CAGGATCAATGATGATGAATTCCCGGCCAGAACTTCAATCTTGCTGTCAATTCAACTCAT
ATTAAGCACAGTAAAAGGGATTGACTTCTTGGAATTCAGGCCTTCTGAGATTGCAGCAGC
AGTGGCAATATCTATTGCAGGAGAAACCCAAACAGTGGACATTGAGAAGGCCATTTCTGT
TGTCATTGAACCTATAGAAAAGGAGAGAGTGCTCAAGTGTATTGAGCTGATGCATGATTT
ATCATTGATTAGTGGGTCTGTGAAGCGTTCTAGTACTGCTGCTTCAGTCCCTTCTGTGCC
CCACACCCCAATTGGTGTGCTGGATGCTGCATGCTTGAGCTATAAAAGTGATGATACAAC
AGTTGGATCATGTGCAAATTCTTCACATAACAAAAAGAGGAAGCTAAACGCACCCCCTGA
AGTGGAGCTATAATTTGATGAGAGGTGGACTTTTCACTTCTCACCCAAATTCTTTCTGTT
TGATTTGGGTGAGTGGGTGTTTTTGTGTGGTCATGAGGGTGGCCCCCCACCAAATACAGA
ACCAAAAAAGAGGAGAGAACCAGGTGAAAGGCAACCCAAAAAAAAGAAAAGTGAAAAAAA
AAAAAAAAAAAGAGTTGAATAAGTTGGGTCATGGATGGGAGATAAAGATGCGATAAAAAC
TTTAATTCTGGTACAATCACCGGCTGTTAAATATTAGACCTTCTTAACGGCAATAGAGAA
ATATAATAAACA