Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g07200.t01
CDS Infomation

cds chromosome:12X:18:5446002:5448150:-1 gene:VIT_18s0001g07200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAAAGGACTGTGGATCCTGGCTTCCCCATCAGCATCCTGGCTGGCTGTCACCCGAT
TTGAATACTTTGAGTGCTCCACTGGGGCTTGAACTGGAGCAGCAAAATATTATTTCTGCT
TACATGAACCCTTGCCCCAATTTGGTTCCCACAAGTGGGTCTTTGACAGCGCACACATTT
TCTGTGCTGCCTCATTCACGCCCCAGCCAACCAAATGAACCTCATGGATGGTTTTACTGT
TTGCCCCGTTTCCGGCAGGCCTTCACACATGCATCCAATTCCATTCTAAAAGAGAAACTC
CCTGCCGGCCCTTATGGGAACTCTAGGGTGGTCAACGCACCCAATGTTATCTCTGAGTGT
GCTCAGAAGAGATTCCTTGTTTTTGATCAGTCAGGTGATCAAACAACATTGGTTTTTAGT
TCTGTGATTGGTACTCCTGGCCAGTGCTTGACTTCTTGGAGCCCAAAACCTTCTGGTGCT
CATAATTTGAGTGGGGGAGAGGAAGGAACAAAACGAGATCTGATTTATCACCAGGGACCA
ATTCTGACTGATGAATCTAATGAAAATGGTGGAACTGATGTGCAGAGTGAGATGCATGAG
GATACAGAGGAGCTCAATGCCTTGCTCTATTCGGATGATGAATACAGTTACTCTGAAGAT
GATGAAGAAACAAGCACTGGTCATTCACCTAGCACAATGACTGTGTATGATAGACAAGAA
TGGCTTGAGGGGGAAGCAGAAGAAGTCGCTAGTTCGGATGGGTCAAATAAGAGGAGAAAA
TTATTCAACGGAGATTTTAATGTACCATCTCTTATGGACACTGCAAGTTCTGCAAAGCCC
GACAATTCCCTCGAGTATGAGGATGATGCTGAATCTAGTTGCGCCGATGGCAACAATCCA
GAGCCAGGAGAAATTCAATCTTTTTCAGGCAACAAGAGGTCGAGGAAAGACAGAATACGT
GAAACAGTGAACATTCTCCAGAGCTTGATTCCTGGCGGGAAGGGCAAGGATGCAATTGTG
GTCCTTGATGAAGCTATCCATTACTTGAAATCATTGAAGCTCAAAGCGAAAGCTTTAGGA
CTTGATACTCCTTGA

Peptide Sequence

PEP ID

VIT_18s0001g07200.t01
PEP Infomation

pep chromosome:12X:18:5446002:5448150:-1 gene:VIT_18s0001g07200 transcript:VIT_18s0001g07200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEKDCGSWLPHQHPGWLSPDLNTLSAPLGLELEQQNIISAYMNPCPNLVPTSGSLTAHTF
SVLPHSRPSQPNEPHGWFYCLPRFRQAFTHASNSILKEKLPAGPYGNSRVVNAPNVISEC
AQKRFLVFDQSGDQTTLVFSSVIGTPGQCLTSWSPKPSGAHNLSGGEEGTKRDLIYHQGP
ILTDESNENGGTDVQSEMHEDTEELNALLYSDDEYSYSEDDEETSTGHSPSTMTVYDRQE
WLEGEAEEVASSDGSNKRRKLFNGDFNVPSLMDTASSAKPDNSLEYEDDAESSCADGNNP
EPGEIQSFSGNKRSRKDRIRETVNILQSLIPGGKGKDAIVVLDEAIHYLKSLKLKAKALG
LDTP

Transcript Sequence

Transcript ID

VIT_18s0001g07200.t01
Transcript Infomation

cdna chromosome:12X:18:5446002:5448150:-1 gene:VIT_18s0001g07200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTGATTTCTCCCCTTCGCATTTCAAGTTAAGCTGGAGTTTTTAGTTTTTTTCTTTATTC
CTGAAAGAGACAACAAGTGATCAGCAACCTGTAATTGCGCTTCTGGTGATCGTCTTGGTT
TGATGGAAAAGGACTGTGGATCCTGGCTTCCCCATCAGCATCCTGGCTGGCTGTCACCCG
ATTTGAATACTTTGAGTGCTCCACTGGGGCTTGAACTGGAGCAGCAAAATATTATTTCTG
CTTACATGAACCCTTGCCCCAATTTGGTTCCCACAAGTGGGTCTTTGACAGCGCACACAT
TTTCTGTGCTGCCTCATTCACGCCCCAGCCAACCAAATGAACCTCATGGATGGTTTTACT
GTTTGCCCCGTTTCCGGCAGGCCTTCACACATGCATCCAATTCCATTCTAAAAGAGAAAC
TCCCTGCCGGCCCTTATGGGAACTCTAGGGTGGTCAACGCACCCAATGTTATCTCTGAGT
GTGCTCAGAAGAGATTCCTTGTTTTTGATCAGTCAGGTGATCAAACAACATTGGTTTTTA
GTTCTGTGATTGGTACTCCTGGCCAGTGCTTGACTTCTTGGAGCCCAAAACCTTCTGGTG
CTCATAATTTGAGTGGGGGAGAGGAAGGAACAAAACGAGATCTGATTTATCACCAGGGAC
CAATTCTGACTGATGAATCTAATGAAAATGGTGGAACTGATGTGCAGAGTGAGATGCATG
AGGATACAGAGGAGCTCAATGCCTTGCTCTATTCGGATGATGAATACAGTTACTCTGAAG
ATGATGAAGAAACAAGCACTGGTCATTCACCTAGCACAATGACTGTGTATGATAGACAAG
AATGGCTTGAGGGGGAAGCAGAAGAAGTCGCTAGTTCGGATGGGTCAAATAAGAGGAGAA
AATTATTCAACGGAGATTTTAATGTACCATCTCTTATGGACACTGCAAGTTCTGCAAAGC
CCGACAATTCCCTCGAGTATGAGGATGATGCTGAATCTAGTTGCGCCGATGGCAACAATC
CAGAGCCAGGAGAAATTCAATCTTTTTCAGGCAACAAGAGGTCGAGGAAAGACAGAATAC
GTGAAACAGTGAACATTCTCCAGAGCTTGATTCCTGGCGGGAAGGGCAAGGATGCAATTG
TGGTCCTTGATGAAGCTATCCATTACTTGAAATCATTGAAGCTCAAAGCGAAAGCTTTAG
GACTTGATACTCCTTGAGCTACAGTTTGTCTTGCCAGTAGTACTAGTAATATTGTTTGGC
ATTATTAGTATTAGAAGATGTTCATGGTTGCCCAGAATAAGTTAGGTAAACATGGGTTGG
ATGTGGATTTTTGCAAGATGATGAGTTTCCAGCATAAGGGCTTGAAATTGGAAATAGTGG
AGAAAGAGCCCGAACTGTGCCGAATCTGAATCTTTTCTTCCATGATTGAGCTGGAAATCA
GTAGCTTCGGCCTGTGAAATTTCTCACTCTAGTCTCTAGAGGGTGAGGTGTGGTAAAAGG
AGGAGCAGTATATTATGTTCCAATAAAAGGGAGATTTTCATCATTAGAGTTATGCCGTGG
GGTTTAGAGAAAGTAACACTCGCACCTGAGCGTGGGGTGGTGGTTGTTGTGTGGATGAGA
AGACTGGTTATCACAGAGGGACCAGGGAAAAGGAGAGTGCAACTCTGCTTAGGTGGATTT
GGGACCCTACTCTTTTACTTTCTCCCCTTTTTGTATCCTTGTCATGTTTTAATCTTCAAT
GGGGGTCATCTTTTTCTGGTATATGGAATTGCATGATGAAGGAGCCTTACTCTGTTTCAT
CATTCATCGGGTGAAAGGGCCCCAATACACCATTCCTGCTCTCATTCCTTGTTCCGCGCA
TGTGAGCGAGAAATTGCCACTTTCATCTCCATACCTAAATTGAGCTTTTTCTTGTGAGGT
GTGGTTGCTTTGTAACTAATGGACCAAGGAAACGTTGATATGGATGTGCATGCTGCTATA
ATGGAAATTGTCTTAGTTGTTGGTTTTGTTGGTAAATGATAGACGT