Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g06390.t01
CDS Infomation

cds chromosome:12X:18:4773069:4780063:-1 gene:VIT_18s0001g06390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGAAACGAAGCAGGTGGAGGGGATTGGTGGTGCTGAGGAGGTTGTTGATAGGGGCC
ATATGTTCGATAGCAGCGGTGGCTCTGCTCTCTGTACACGTACACATTTTCCTTTCATCC
AAAGTCCCGGACTTCTCCGACTCCTATAAGCTACCCACGCAACATGAAATTGGGTTCCAG
AGGTTGAGCACCGAGCGAAAATGGGTTCAAGAGTTGGCTCCACCCCATTTATCAAAAGCT
CCACTGCCTTCTCGCAAGTTGGATGGTGCAAGTGGGATTTTGGATTTGGACAAGCTATGG
AAGCCTCCACAAAATCGGGATTTTGTGCCCTGTGTTGACCCTGGTGCAAACTATACATCT
CCTGCAGAGTCACAGGGTTACCTGCTCGTTCATACAAATGGTGGGCTCAATCAAATGCGG
GCTGGGATATGTGACATGGTAGCTGTAGCCCGCATCATCAATGCCACTCTTGTAATTCCT
GAACTTGATAAGCGGTCATTTTGGCAAGACTCTAGTAACTTCTCAGATGTCTTTGATGAA
GATCATTTTATTAGCGCTCTAGCTTATGATGTAAAGGTCATAAAAAAGCTCCCCAAGGAA
CTAGCAACTGCTCCTAGAGCAGTTAAGCATTTTAGAAGCTGGTCTGGTATAGATTATTAT
CAGAATGAGATAGCTAGCATGTGGGCTGATTATCAGGTTATCAGAGCTGCTAAATCTGAT
TCTCGTCTGGCAAATAATAACTTGCTTCCAGACATTCAGAAGCTGAGGTGCCGTGCTTGT
TATGAAGCCCTCCGTTTTGCACCCCAAATTGAGGCAATGGGAAAATTGTTGGTGGATAGA
ATGAGGTCCTATGGTCCTTACATTGCTCTACATTTACGATATGAGAAGGACATGCTGGCT
TTTAGTGGATGCACGCATGATTTATCCCCCGCTGAAGCTGAAGAACTTAGGATGATCAGA
GAAAACACAGCATATTGGAAAGTAAAGGGTATTGATTCCAGGGAACAGAGAGCCAAAGGG
TATTGCCCCTTAACTCCAAAGGAGGTTGGAATTTTCCTAATGGCTCTTGGATACCCATCT
AGCACTCCCATATATATTGCTGCAGGAGAGATATATGGGGGTGATTCTCATATGGCAGAT
TTGCAATCTCGTTATCCCATATTAATGAGCAAGGAAAAACTGGCATCCATTGATGAGCTT
GAACCGTTTGCTAATCATGCATCTCAGATGGCTGCACTTGATTATATTGTATCAGTTGAA
AGTGATGTATTTATTCCTTCGTACTCTGGAAACATGGCAAGAGCAGTTGAGGGTCATCGT
CGTTTTTTGGGACACAGGAAAACAATTTCTCCTGACAGGCAAGATTCTCTTGTTCATCTG
TTTGACAAAATTGAGCGGGGATCCCTGAAAGAAGGCAAAAACCTATCAAATAAAATTATG
GAACTGCACAGAAAAAGGCAAGGGTCTCCAAGAAAAAGAAAAGGCCCCATCTCTGGAACA
AAGGGCATGGATAGGTTTCGTTCAGAAGAGGCATTTTACGTGAACCCTATACCAGATTGT
TTATGTCACAAGGAGCCCCCAGATATGAACACCTCTATCATTATCAGGTAG

Peptide Sequence

PEP ID

VIT_18s0001g06390.t01
PEP Infomation

pep chromosome:12X:18:4773069:4780063:-1 gene:VIT_18s0001g06390 transcript:VIT_18s0001g06390.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQKRSRWRGLVVLRRLLIGAICSIAAVALLSVHVHIFLSSKVPDFSDSYKLPTQHEIGFQ
RLSTERKWVQELAPPHLSKAPLPSRKLDGASGILDLDKLWKPPQNRDFVPCVDPGANYTS
PAESQGYLLVHTNGGLNQMRAGICDMVAVARIINATLVIPELDKRSFWQDSSNFSDVFDE
DHFISALAYDVKVIKKLPKELATAPRAVKHFRSWSGIDYYQNEIASMWADYQVIRAAKSD
SRLANNNLLPDIQKLRCRACYEALRFAPQIEAMGKLLVDRMRSYGPYIALHLRYEKDMLA
FSGCTHDLSPAEAEELRMIRENTAYWKVKGIDSREQRAKGYCPLTPKEVGIFLMALGYPS
STPIYIAAGEIYGGDSHMADLQSRYPILMSKEKLASIDELEPFANHASQMAALDYIVSVE
SDVFIPSYSGNMARAVEGHRRFLGHRKTISPDRQDSLVHLFDKIERGSLKEGKNLSNKIM
ELHRKRQGSPRKRKGPISGTKGMDRFRSEEAFYVNPIPDCLCHKEPPDMNTSIIIR

Transcript Sequence

Transcript ID

VIT_18s0001g06390.t01
Transcript Infomation

cdna chromosome:12X:18:4773069:4780063:-1 gene:VIT_18s0001g06390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACCAATGCCGAGCGCGGTGGGGGGACGCGAGAGAAAGAAATCGAAACAGACCACCACCGA
CTCGTTCAGCAGTGAACAGAGAGGAAGAGGAAGAAAAACGGGAAGGAAGTTGAAGAGGAA
TGCTCTAGTGAGTTGTGGAGAGAGAAAAAGATGCAGAAACGAAGCAGGTGGAGGGGATTG
GTGGTGCTGAGGAGGTTGTTGATAGGGGCCATATGTTCGATAGCAGCGGTGGCTCTGCTC
TCTGTACACGTACACATTTTCCTTTCATCCAAAGTCCCGGACTTCTCCGACTCCTATAAG
CTACCCACGCAACATGAAATTGGGTTCCAGAGGTTGAGCACCGAGCGAAAATGGGTTCAA
GAGTTGGCTCCACCCCATTTATCAAAAGCTCCACTGCCTTCTCGCAAGTTGGATGGTGCA
AGTGGGATTTTGGATTTGGACAAGCTATGGAAGCCTCCACAAAATCGGGATTTTGTGCCC
TGTGTTGACCCTGGTGCAAACTATACATCTCCTGCAGAGTCACAGGGTTACCTGCTCGTT
CATACAAATGGTGGGCTCAATCAAATGCGGGCTGGGATATGTGACATGGTAGCTGTAGCC
CGCATCATCAATGCCACTCTTGTAATTCCTGAACTTGATAAGCGGTCATTTTGGCAAGAC
TCTAGTAACTTCTCAGATGTCTTTGATGAAGATCATTTTATTAGCGCTCTAGCTTATGAT
GTAAAGGTCATAAAAAAGCTCCCCAAGGAACTAGCAACTGCTCCTAGAGCAGTTAAGCAT
TTTAGAAGCTGGTCTGGTATAGATTATTATCAGAATGAGATAGCTAGCATGTGGGCTGAT
TATCAGGTTATCAGAGCTGCTAAATCTGATTCTCGTCTGGCAAATAATAACTTGCTTCCA
GACATTCAGAAGCTGAGGTGCCGTGCTTGTTATGAAGCCCTCCGTTTTGCACCCCAAATT
GAGGCAATGGGAAAATTGTTGGTGGATAGAATGAGGTCCTATGGTCCTTACATTGCTCTA
CATTTACGATATGAGAAGGACATGCTGGCTTTTAGTGGATGCACGCATGATTTATCCCCC
GCTGAAGCTGAAGAACTTAGGATGATCAGAGAAAACACAGCATATTGGAAAGTAAAGGGT
ATTGATTCCAGGGAACAGAGAGCCAAAGGGTATTGCCCCTTAACTCCAAAGGAGGTTGGA
ATTTTCCTAATGGCTCTTGGATACCCATCTAGCACTCCCATATATATTGCTGCAGGAGAG
ATATATGGGGGTGATTCTCATATGGCAGATTTGCAATCTCGTTATCCCATATTAATGAGC
AAGGAAAAACTGGCATCCATTGATGAGCTTGAACCGTTTGCTAATCATGCATCTCAGATG
GCTGCACTTGATTATATTGTATCAGTTGAAAGTGATGTATTTATTCCTTCGTACTCTGGA
AACATGGCAAGAGCAGTTGAGGGTCATCGTCGTTTTTTGGGACACAGGAAAACAATTTCT
CCTGACAGGCAAGATTCTCTTGTTCATCTGTTTGACAAAATTGAGCGGGGATCCCTGAAA
GAAGGCAAAAACCTATCAAATAAAATTATGGAACTGCACAGAAAAAGGCAAGGGTCTCCA
AGAAAAAGAAAAGGCCCCATCTCTGGAACAAAGGGCATGGATAGGTTTCGTTCAGAAGAG
GCATTTTACGTGAACCCTATACCAGATTGTTTATGTCACAAGGAGCCCCCAGATATGAAC
ACCTCTATCATTATCAGGTAGATTAGTTGCAGCGGAACAATGTCCTCCAAAGAAATACCC
ATGCTGGTGGATTTGCGGCACATTTTCTTTCCTGATTATTTATAGAAAGCTTCAGTGGTG
GCATTATAGCGGATACAACTGCGGAGTGTGTGTATATCTTGAGTCCAGGTAGCTGAGGCG
AGGGTGTATAGAAATGTAGATGAAAGGGAGAATGCATAAGAGAGAGGAGGTAAAAAGACC
ACTGGTTTTATCATCTGGCCTCATTAATTTCTTGAGGGTAGTTGGTTGGTTTGACGGTGG
AGGGGCTTTGGTGGGAATTCAATGTGATACTATGAGGGTAGCCGTTGGAAATAATGT