Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g06090.t01
CDS Infomation

cds chromosome:12X:18:4613633:4615316:-1 gene:VIT_18s0001g06090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTTCCTTAGCCTCAGCTGAGAAGCCACATGCAGTTTGCATACCGTACCCAGCACAA
GGCCACATAAACCCTATGCTAAAACTAGCTAAGTTCCTTCATTTCAGAGGGTTCCACATT
ACCTTTGTCAACACAGAGTACAACCATAACCGCCTGCTCAAATCTCGGGGTCCAGACTCC
CTCAAGGGCATCCCCTCCTTCCAATTCAAGACCATTCCCGATGGTCTCCTTCCCTCCAAT
GTTGATGCCACCCAAGACATTCCCGCCCTCTGTGTCTCCACCAGAAAACACTGCCTGCCT
CCCTTTAGAGACCTTCTTTCCAACCTCAACCACGATGGCCCTCCAGTCACTTGCATAGTT
TCTGATGGCGCCATGAGCTTCACTCTTGATGCTGCTCAAGAGCTTGGCGTTCCTGAAGTT
CTTTTCTGGACAACTAGTGCTTGCGGCTTCATGGGCTACGTGCAATATCGCAATCTTATC
GATAAGGGTTTGGCTCCACTCAAAGATGAGAGTTACCTAACAAATGGGTATCTGGATACC
GTTATTGATTGGATACCGGGTATGAAAGGTATCCGTTTGAGGGATATCCCAAGCTTCATT
CGAACTACGGACCCAAATGAAATTATGCTGGAATTTCCATTGCGGGAGGCTGAAAGAGCT
CGCAAGGCTTCTGCCCTCATTTTCAATACATTTGATGCTCTAGAGCATGAAGTTTTGGAT
GCACTTTCTCAGATGTTTCCCCCAATCTACACCATCGGTCCCCTGCACCAACTCATGAGT
CAGATCCAAGATAACGATTTGAAGTTGATGGAATCGAATCTGTGGAAAGAAGAGCCGGAA
TGTCTGGAGTGGCTGGACTCCAAAGAGCCCAACTCTGTTGTTTACGTGAATTTCGGGAGC
ATCACAGTGATGACATCGCAGCAACTCAATGAGTTTGCTTGGGGACTTGTGAATAGCAAT
CAGACGTTCTTATGGATAATTAGGCCAGATCTTGTGTCCGGTGACGCGGCCATTCTTCCA
CCAGAATTCGTGGCAGAGACGAAAGAGAGGGGTCTGTTAGCAGGTTGGTGTCCTCAAGAG
CAAGTTCTCAGTCACCCGGCTGTTGGCGGCTTCTTAACTCACAACGGATGGAATTCCACA
ATTGAAAGTGTGAGCGCTGGAGTGCCTATGATTTGTTGGCCCTTTTTTGCAGAGCAGCAA
ACCAACTGCCGCTACTGTTGCACTGAGTGGGGCATAGGCATGGAGATAGACAGCGATGTT
AAGAGAGATGAAATTGAAAGGCTTGTGAAGGAGTTGATGGAGGGAGAGAAAGGCAAAGAG
TTGAAGAAGAAGGCCTTGGAGTGGAAGACTCTAGCAGAAGAGGCCACTAGAGGTCCCAAG
GGGTCGTCTTTCTCGAACTTGGACAAAATGATCACTCAAGCTCTTCTCTAG

Peptide Sequence

PEP ID

VIT_18s0001g06090.t01
PEP Infomation

pep chromosome:12X:18:4613633:4615316:-1 gene:VIT_18s0001g06090 transcript:VIT_18s0001g06090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSLASAEKPHAVCIPYPAQGHINPMLKLAKFLHFRGFHITFVNTEYNHNRLLKSRGPDS
LKGIPSFQFKTIPDGLLPSNVDATQDIPALCVSTRKHCLPPFRDLLSNLNHDGPPVTCIV
SDGAMSFTLDAAQELGVPEVLFWTTSACGFMGYVQYRNLIDKGLAPLKDESYLTNGYLDT
VIDWIPGMKGIRLRDIPSFIRTTDPNEIMLEFPLREAERARKASALIFNTFDALEHEVLD
ALSQMFPPIYTIGPLHQLMSQIQDNDLKLMESNLWKEEPECLEWLDSKEPNSVVYVNFGS
ITVMTSQQLNEFAWGLVNSNQTFLWIIRPDLVSGDAAILPPEFVAETKERGLLAGWCPQE
QVLSHPAVGGFLTHNGWNSTIESVSAGVPMICWPFFAEQQTNCRYCCTEWGIGMEIDSDV
KRDEIERLVKELMEGEKGKELKKKALEWKTLAEEATRGPKGSSFSNLDKMITQALL

Transcript Sequence

Transcript ID

VIT_18s0001g06090.t01
Transcript Infomation

cdna chromosome:12X:18:4613633:4615316:-1 gene:VIT_18s0001g06090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GACAGAGTGAAAGTGAGAGATAGAGAGAGAGAGAATGGGTTCCTTAGCCTCAGCTGAGAA
GCCACATGCAGTTTGCATACCGTACCCAGCACAAGGCCACATAAACCCTATGCTAAAACT
AGCTAAGTTCCTTCATTTCAGAGGGTTCCACATTACCTTTGTCAACACAGAGTACAACCA
TAACCGCCTGCTCAAATCTCGGGGTCCAGACTCCCTCAAGGGCATCCCCTCCTTCCAATT
CAAGACCATTCCCGATGGTCTCCTTCCCTCCAATGTTGATGCCACCCAAGACATTCCCGC
CCTCTGTGTCTCCACCAGAAAACACTGCCTGCCTCCCTTTAGAGACCTTCTTTCCAACCT
CAACCACGATGGCCCTCCAGTCACTTGCATAGTTTCTGATGGCGCCATGAGCTTCACTCT
TGATGCTGCTCAAGAGCTTGGCGTTCCTGAAGTTCTTTTCTGGACAACTAGTGCTTGCGG
CTTCATGGGCTACGTGCAATATCGCAATCTTATCGATAAGGGTTTGGCTCCACTCAAAGA
TGAGAGTTACCTAACAAATGGGTATCTGGATACCGTTATTGATTGGATACCGGGTATGAA
AGGTATCCGTTTGAGGGATATCCCAAGCTTCATTCGAACTACGGACCCAAATGAAATTAT
GCTGGAATTTCCATTGCGGGAGGCTGAAAGAGCTCGCAAGGCTTCTGCCCTCATTTTCAA
TACATTTGATGCTCTAGAGCATGAAGTTTTGGATGCACTTTCTCAGATGTTTCCCCCAAT
CTACACCATCGGTCCCCTGCACCAACTCATGAGTCAGATCCAAGATAACGATTTGAAGTT
GATGGAATCGAATCTGTGGAAAGAAGAGCCGGAATGTCTGGAGTGGCTGGACTCCAAAGA
GCCCAACTCTGTTGTTTACGTGAATTTCGGGAGCATCACAGTGATGACATCGCAGCAACT
CAATGAGTTTGCTTGGGGACTTGTGAATAGCAATCAGACGTTCTTATGGATAATTAGGCC
AGATCTTGTGTCCGGTGACGCGGCCATTCTTCCACCAGAATTCGTGGCAGAGACGAAAGA
GAGGGGTCTGTTAGCAGGTTGGTGTCCTCAAGAGCAAGTTCTCAGTCACCCGGCTGTTGG
CGGCTTCTTAACTCACAACGGATGGAATTCCACAATTGAAAGTGTGAGCGCTGGAGTGCC
TATGATTTGTTGGCCCTTTTTTGCAGAGCAGCAAACCAACTGCCGCTACTGTTGCACTGA
GTGGGGCATAGGCATGGAGATAGACAGCGATGTTAAGAGAGATGAAATTGAAAGGCTTGT
GAAGGAGTTGATGGAGGGAGAGAAAGGCAAAGAGTTGAAGAAGAAGGCCTTGGAGTGGAA
GACTCTAGCAGAAGAGGCCACTAGAGGTCCCAAGGGGTCGTCTTTCTCGAACTTGGACAA
AATGATCACTCAAGCTCTTCTCTAGACCCTAGACACTCCTTTCTCGAATGTCCCAACTCA
GCGAATTCTGACTCGTCTATTATTTTGCTCTGGATGCTTCATTTGTTGTTTTCAATAGTC
TGACGTATTGTTTACG