Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g06060.t01
CDS Infomation

cds chromosome:12X:18:4605365:4607009:-1 gene:VIT_18s0001g06060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTTCCATGGAGAAGCCTCATGCAGTTTGCATTCCATACCCTGCTCAGGGGCACATC
AATCCTATGCTAAAAGTAGCAAAGCTCCTCCATTTCAGAGGCTTTCGTATCACCTTTGTC
AACACAGAGTTCAACCACACACGCTTACTCAAGGCCCAGGGCCCCAACTCCCTCAATGGT
CTCCCCACCTTTCAGTTCGAAACCATTCCCGATGGTCTCCCACCGTCCAATGTCGACGCA
ACCCAAGACATCCCTTCCCTCTGTGCATCCACCAAAAAAAACTGTTTGGCTCCCTTTAGA
CGCCTTCTCGCCAAACTCAACGACAGAGGTCCTCCCGTCACTTGCATATTTTCTGACGCT
GTCATGAGCTTCACTTTAGACGCGGCTCAAGAACTCGGCATTCCCGACCTTCTTTTATGG
ACAGCTAGTGCTTGTGGCTTCATGGCCTATGTGCAGTATCGCAGTCTCATCGACAAGGGT
TTTACACCACTCAAAGATGAGAGTTATCTAACAAATGGGTATTTGGATACTGTTGTTGAT
TGGATACCGGGCATGAAAGGTATCCGTTTGAAGGATCTCCCGAGCTTCATTCGGACTACC
GATCCAGATGATATCATGCTGGACTTTGCCATGGGTGAGCTTGAAAGGGCTCGCAAGGCT
TCTGCCATCATTTTCAATACGTTTGACGCTTTAGAGCAGGAGGTTTTGGATGCAATTGCT
CCCATGTATCCCCCAATCTACACCATTGGTCCTCTTCAGCTACTTCCGGATCAGATTCAC
GATAGCGAACTAAAGTTGATTGGATCAAATCTGTGGAAGGAAGAGCCTGAGTGTCTCAAA
TGGCTGGATTCCAAAGAACCCAACTCTGTTGTTTACGTTAATTATGGAAGCATCACAGTC
ATGACTCCCCAGCAACTGATTGAGTTTGCTTGGGGACTTGCAAATAGCAATCAAAGCTTC
TTGTGGATTCTTAGGCCAGATCTCGTGTCTGGTGAGTCGGCCATTCTGCCACCAGAATTC
GTGGCAGAAACAGAAGACAGGGGTTTACTAGCAGGTTGGTGTCCTCAAGAGCAAGTTCTC
ACGCACCAGGCCATTGGCGGCTTCTTAACTCATAACGGCTGGAATTCCACAATTGAGGGT
TTATGCGCTGGAGTGCCTATGATTTGTTGGCCATTTTTTGCAGAGCAGCAAACCAACTGT
CGTTACTGCTGCACTGAGTGGGGCGTAGGAATGGAGATAGACAGTGATGTTAAGAGGGAT
GAAGTTGCAAAGCTTGTGAGAGAGTTGATGGTGGGAGAGAAAGGCAAAGTAATGAAAAAG
AAAACCATGGAGTGGAAGCATAGGGCAGAAGTGGCTACCACTGGTCCAGATGGATCATCT
TACTTGAATTTGGAGAAAATATTTGAACAAGTGCTTCTCTAG

Peptide Sequence

PEP ID

VIT_18s0001g06060.t01
PEP Infomation

pep chromosome:12X:18:4605365:4607009:-1 gene:VIT_18s0001g06060 transcript:VIT_18s0001g06060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSMEKPHAVCIPYPAQGHINPMLKVAKLLHFRGFRITFVNTEFNHTRLLKAQGPNSLNG
LPTFQFETIPDGLPPSNVDATQDIPSLCASTKKNCLAPFRRLLAKLNDRGPPVTCIFSDA
VMSFTLDAAQELGIPDLLLWTASACGFMAYVQYRSLIDKGFTPLKDESYLTNGYLDTVVD
WIPGMKGIRLKDLPSFIRTTDPDDIMLDFAMGELERARKASAIIFNTFDALEQEVLDAIA
PMYPPIYTIGPLQLLPDQIHDSELKLIGSNLWKEEPECLKWLDSKEPNSVVYVNYGSITV
MTPQQLIEFAWGLANSNQSFLWILRPDLVSGESAILPPEFVAETEDRGLLAGWCPQEQVL
THQAIGGFLTHNGWNSTIEGLCAGVPMICWPFFAEQQTNCRYCCTEWGVGMEIDSDVKRD
EVAKLVRELMVGEKGKVMKKKTMEWKHRAEVATTGPDGSSYLNLEKIFEQVLL

Transcript Sequence

Transcript ID

VIT_18s0001g06060.t01
Transcript Infomation

cdna chromosome:12X:18:4605365:4607009:-1 gene:VIT_18s0001g06060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCGGGAGGGCATCCCAAAGCAAAAATGGGTTCCATGGAGAAGCCTCATGCAGTTTGCATT
CCATACCCTGCTCAGGGGCACATCAATCCTATGCTAAAAGTAGCAAAGCTCCTCCATTTC
AGAGGCTTTCGTATCACCTTTGTCAACACAGAGTTCAACCACACACGCTTACTCAAGGCC
CAGGGCCCCAACTCCCTCAATGGTCTCCCCACCTTTCAGTTCGAAACCATTCCCGATGGT
CTCCCACCGTCCAATGTCGACGCAACCCAAGACATCCCTTCCCTCTGTGCATCCACCAAA
AAAAACTGTTTGGCTCCCTTTAGACGCCTTCTCGCCAAACTCAACGACAGAGGTCCTCCC
GTCACTTGCATATTTTCTGACGCTGTCATGAGCTTCACTTTAGACGCGGCTCAAGAACTC
GGCATTCCCGACCTTCTTTTATGGACAGCTAGTGCTTGTGGCTTCATGGCCTATGTGCAG
TATCGCAGTCTCATCGACAAGGGTTTTACACCACTCAAAGATGAGAGTTATCTAACAAAT
GGGTATTTGGATACTGTTGTTGATTGGATACCGGGCATGAAAGGTATCCGTTTGAAGGAT
CTCCCGAGCTTCATTCGGACTACCGATCCAGATGATATCATGCTGGACTTTGCCATGGGT
GAGCTTGAAAGGGCTCGCAAGGCTTCTGCCATCATTTTCAATACGTTTGACGCTTTAGAG
CAGGAGGTTTTGGATGCAATTGCTCCCATGTATCCCCCAATCTACACCATTGGTCCTCTT
CAGCTACTTCCGGATCAGATTCACGATAGCGAACTAAAGTTGATTGGATCAAATCTGTGG
AAGGAAGAGCCTGAGTGTCTCAAATGGCTGGATTCCAAAGAACCCAACTCTGTTGTTTAC
GTTAATTATGGAAGCATCACAGTCATGACTCCCCAGCAACTGATTGAGTTTGCTTGGGGA
CTTGCAAATAGCAATCAAAGCTTCTTGTGGATTCTTAGGCCAGATCTCGTGTCTGGTGAG
TCGGCCATTCTGCCACCAGAATTCGTGGCAGAAACAGAAGACAGGGGTTTACTAGCAGGT
TGGTGTCCTCAAGAGCAAGTTCTCACGCACCAGGCCATTGGCGGCTTCTTAACTCATAAC
GGCTGGAATTCCACAATTGAGGGTTTATGCGCTGGAGTGCCTATGATTTGTTGGCCATTT
TTTGCAGAGCAGCAAACCAACTGTCGTTACTGCTGCACTGAGTGGGGCGTAGGAATGGAG
ATAGACAGTGATGTTAAGAGGGATGAAGTTGCAAAGCTTGTGAGAGAGTTGATGGTGGGA
GAGAAAGGCAAAGTAATGAAAAAGAAAACCATGGAGTGGAAGCATAGGGCAGAAGTGGCT
ACCACTGGTCCAGATGGATCATCTTACTTGAATTTGGAGAAAATATTTGAACAAGTGCTT
CTCTAGATCTCAACTTTCCAATCTAGTTTTTTGCACCTTTCCTGCCTTGTTTCCATATTT
CTTACTATGGTTCATGTTGTGGTTTGTTTCTTTAATATTGTTTCAGACAA